| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635242
Identifier: 110635242
GI number: 110635242
Start: 3164940
End: 3165431
Strand: Reverse
Name: 110635242
Synonym: Meso_2912
Alternate gene names: NA
Gene position: 3165431-3164940 (Counterclockwise)
Preceding gene: 110635243
Following gene: 110635241
Centisome position: 71.74
GC content: 53.66
Gene sequence:
>492_bases ATGCTATCCGTTTCCAACTGGATCTCAGGAACAGCGCTCAACGACCTGTTGATTGCTGTATCTTGGGCCGTGCCCCTAAT TCAAGTCATTCACATTCTCAGTCTTGCGTTGGTCTTGACCTCGGCAGCGGTTCTGAGTGCGCGCGCCCTCGGCGTCGTTT TTGGGCAGGTTGACATCGAAGCCGTCGTCAAGCGCTTCTCACCCGTTCTTTGGGGTGCGCTCGTTCTCATGGTCGCAAGC GGAATGCTTCTGATCATAGCTGAGCCAGAAAGATCGCTGATAAACCCCGTTTTCGGGCTCAAAATGGCCCTGCTCGTAGC AGCAGTGGGAGCAACGCTTCTTCTGCAGAAGCGTCTCAACGGTATCGTATCGTCACCGGATGGACAGATAACGCTTTCAG CTTCGCTGCAGTTCCTTGCGGTTATCAACCTTGGACTATGGGTGGCGATCGCCAGTTGCGGACGTCTGATAGCCTATTAT TCCACCCATTAA
Upstream 100 bases:
>100_bases CTTAGGCGCCTACACCAGCGTCATAGGAAGGGAGATTTGGTTTCAGCAAGCCCAGTGCGGTTGCGTGCATGGACCCGGAA CTGCAACCTAAGGAGGCCGT
Downstream 100 bases:
>100_bases TTCGGTATTCAAAAGTGAGAATTCCCAATGGCCTTTGAAGGTATCGCTCAGTGGCTTCAGAACACTCTTCTGGCCCAATT CATAGCCGGATCGGCATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MLSVSNWISGTALNDLLIAVSWAVPLIQVIHILSLALVLTSAAVLSARALGVVFGQVDIEAVVKRFSPVLWGALVLMVAS GMLLIIAEPERSLINPVFGLKMALLVAAVGATLLLQKRLNGIVSSPDGQITLSASLQFLAVINLGLWVAIASCGRLIAYY STH
Sequences:
>Translated_163_residues MLSVSNWISGTALNDLLIAVSWAVPLIQVIHILSLALVLTSAAVLSARALGVVFGQVDIEAVVKRFSPVLWGALVLMVAS GMLLIIAEPERSLINPVFGLKMALLVAAVGATLLLQKRLNGIVSSPDGQITLSASLQFLAVINLGLWVAIASCGRLIAYY STH >Mature_163_residues MLSVSNWISGTALNDLLIAVSWAVPLIQVIHILSLALVLTSAAVLSARALGVVFGQVDIEAVVKRFSPVLWGALVLMVAS GMLLIIAEPERSLINPVFGLKMALLVAAVGATLLLQKRLNGIVSSPDGQITLSASLQFLAVINLGLWVAIASCGRLIAYY STH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17156; Mature: 17156
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVSNWISGTALNDLLIAVSWAVPLIQVIHILSLALVLTSAAVLSARALGVVFGQVDIE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVKRFSPVLWGALVLMVASGMLLIIAEPERSLINPVFGLKMALLVAAVGATLLLQKRLN HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVSSPDGQITLSASLQFLAVINLGLWVAIASCGRLIAYYSTH HCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSVSNWISGTALNDLLIAVSWAVPLIQVIHILSLALVLTSAAVLSARALGVVFGQVDIE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVKRFSPVLWGALVLMVASGMLLIIAEPERSLINPVFGLKMALLVAAVGATLLLQKRLN HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVSSPDGQITLSASLQFLAVINLGLWVAIASCGRLIAYYSTH HCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA