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The map label for this gene is 110635159

Identifier: 110635159

GI number: 110635159

Start: 3074643

End: 3075050

Strand: Reverse

Name: 110635159

Synonym: Meso_2826

Alternate gene names: NA

Gene position: 3075050-3074643 (Counterclockwise)

Preceding gene: 110635160

Following gene: 110635155

Centisome position: 69.69

GC content: 59.07

Gene sequence:

>408_bases
ATGAAGCAGCGCTTCATGCTCGACACTAACGCCGTGAGTGCCTTTATGCACGGCCGAAGTACCACGCTGGACTGGCGAAT
TTCGGCCTATGGAAAAGCCGAACTTTGCGTTTCCGTTGTGACCTACGCTGAGACCAGATACGGACTTGCCCAGCGGCCGG
AAGCAAAACGCTTAGCGGCGGCTGCTGACGCATTGTTCGATCTGGTTGAGATCCTACCGTGGACAGCGGAAGTGGCGTGC
CGATATGGCGAGATGCGGGCGCAGCTTAGAAGAGAGGGACGAATGCTCCAGCCGCTCGACATGCTGATTGCCGCACACGC
CCTGGAAGCGGGCGCGACGCTGGTGACCAGCGATCGCGCCTTCCGCTTCGTTCCCGGCCTTATGGTCGAGAATTGGCTTG
AGGGTTAA

Upstream 100 bases:

>100_bases
ACAAATTCTTCGAACTGCGTGAGCGGATTCCTTCAGAGGAGCTGGAAGGCTTTATGGAGGATCGCGAGCAGGGCGTCCAC
GAGCGTGACGATCCGCTGGC

Downstream 100 bases:

>100_bases
ACGCGCTCCAGCGCCAGCGCGATCCCTTGGCCGACTCCGATGCACATGGTGGCGAGCGCCAACCTTGCGCCGCGCTCCCT
GAGTTCCAGCGCCGCCGTGC

Product: PilT protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKQRFMLDTNAVSAFMHGRSTTLDWRISAYGKAELCVSVVTYAETRYGLAQRPEAKRLAAAADALFDLVEILPWTAEVAC
RYGEMRAQLRREGRMLQPLDMLIAAHALEAGATLVTSDRAFRFVPGLMVENWLEG

Sequences:

>Translated_135_residues
MKQRFMLDTNAVSAFMHGRSTTLDWRISAYGKAELCVSVVTYAETRYGLAQRPEAKRLAAAADALFDLVEILPWTAEVAC
RYGEMRAQLRREGRMLQPLDMLIAAHALEAGATLVTSDRAFRFVPGLMVENWLEG
>Mature_135_residues
MKQRFMLDTNAVSAFMHGRSTTLDWRISAYGKAELCVSVVTYAETRYGLAQRPEAKRLAAAADALFDLVEILPWTAEVAC
RYGEMRAQLRREGRMLQPLDMLIAAHALEAGATLVTSDRAFRFVPGLMVENWLEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15126; Mature: 15126

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRFMLDTNAVSAFMHGRSTTLDWRISAYGKAELCVSVVTYAETRYGLAQRPEAKRLAA
CCCCEECCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AADALFDLVEILPWTAEVACRYGEMRAQLRREGRMLQPLDMLIAAHALEAGATLVTSDRA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCC
FRFVPGLMVENWLEG
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQRFMLDTNAVSAFMHGRSTTLDWRISAYGKAELCVSVVTYAETRYGLAQRPEAKRLAA
CCCCEECCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AADALFDLVEILPWTAEVACRYGEMRAQLRREGRMLQPLDMLIAAHALEAGATLVTSDRA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCC
FRFVPGLMVENWLEG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]