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The map label for this gene is ctaC [H]

Identifier: 110635125

GI number: 110635125

Start: 3038368

End: 3039360

Strand: Reverse

Name: ctaC [H]

Synonym: Meso_2792

Alternate gene names: 110635125

Gene position: 3039360-3038368 (Counterclockwise)

Preceding gene: 110635126

Following gene: 110635124

Centisome position: 68.88

GC content: 66.36

Gene sequence:

>993_bases
ATGAGGCGCGGCGCGGGGCGGGTGGTTCTTCTGTCAATTGCCTCGGCGCTTTCGGGTTGCTCGGGCGTGCAGTCGGCGCT
TTCACCGAGCGGCGTGGAGGCGCTCAGGATCGACCCGCTCTTCTGGACCGCCACCGGGGTGAGCGTCGCCGTGACTCTGA
TGGTGGTTGTCCTGATGGCGCTCGCGCTTTACGGGCCGCCGCGCTGGCGGTCGTGGCTCGGCGGCGACCGCGTGATTATC
GGCGGCGGCGTCGTGCTGCCGATCGTGGTGCTCACCGGCCTGTTCATCTATGGGCTGTTCGTCATGCAGGCCGGTGCCGT
GCGAAGCGCGCGGGAAGGCGAGGCCACGGTGACCATCATTGGAAAGCTCTGGTGGTGGGAAGTCGTCTATCAGGGGCCTG
ATGGAGAGGAAATCGTAAGCGCCAATGAGTTGCGCCTGCCGGCGGGCCGGCCCGTCCGCCTGCGGCTGGAATCCGACAAT
GTGATCCATAGCTTCTGGGCGCCGCAGATCGCCGGAAAACTCGACATGATCCCCGGACGAACCAACGAGGTGGTGGTGGA
GGCGACCGCGCCTGGCATCAGCCGTGGGCAATGCGCGGAATATTGTGGCGGGGCCCATGCGCTGATGGCCTTCTACGTTG
TTGCGATGGCACCCGACGAATACGACGCCTGGCTTGCGCGCGAAGCGGGGCCGGCGCCGGAGCCCTTGACGGAAGGCGAG
GCGCGCGGGCGCCAAGTTTTTCTCGAAAACGGGTGCGGCGGCTGCCATCAGGTGCGCGGCACCGAGGCGCGCGGGCGCAT
CGGTCCCGATCTTACCCATGTGGGCAGCCGCATGTCGCTCGCGGCAGGGATGATGCCCAATGACGTAGACGCGTTCGCGC
GCTGGATCGTCGAGAACCAGCACATCAAGCCTGAGAACAAGATGCCGCCCTTCCGCCAGTTCGGGGAAGAGGAGCTTACG
GCACTCGCCGCCTATCTGGACAGCCTGGAGTAG

Upstream 100 bases:

>100_bases
AGCGGCTGAGCGAGCAGCAGATTCGGGATCTTGCGGCCTATTTCGCCTCGCGCGCAGGGGGAACAGGGGGTGAAGCTTCA
GCCGGGCCGGAGGCGCGGCA

Downstream 100 bases:

>100_bases
TTGATGGCCAAGTTCAAGGAGCTTCCGAACAAACTCCCGCGCCCGCCTGGCGAACTCCAGGAACTCGAACGCGCCTGGAA
GATCCCCGGCGGTTTCCGGC

Product: cytochrome c oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRRGAGRVVLLSIASALSGCSGVQSALSPSGVEALRIDPLFWTATGVSVAVTLMVVVLMALALYGPPRWRSWLGGDRVII
GGGVVLPIVVLTGLFIYGLFVMQAGAVRSAREGEATVTIIGKLWWWEVVYQGPDGEEIVSANELRLPAGRPVRLRLESDN
VIHSFWAPQIAGKLDMIPGRTNEVVVEATAPGISRGQCAEYCGGAHALMAFYVVAMAPDEYDAWLAREAGPAPEPLTEGE
ARGRQVFLENGCGGCHQVRGTEARGRIGPDLTHVGSRMSLAAGMMPNDVDAFARWIVENQHIKPENKMPPFRQFGEEELT
ALAAYLDSLE

Sequences:

>Translated_330_residues
MRRGAGRVVLLSIASALSGCSGVQSALSPSGVEALRIDPLFWTATGVSVAVTLMVVVLMALALYGPPRWRSWLGGDRVII
GGGVVLPIVVLTGLFIYGLFVMQAGAVRSAREGEATVTIIGKLWWWEVVYQGPDGEEIVSANELRLPAGRPVRLRLESDN
VIHSFWAPQIAGKLDMIPGRTNEVVVEATAPGISRGQCAEYCGGAHALMAFYVVAMAPDEYDAWLAREAGPAPEPLTEGE
ARGRQVFLENGCGGCHQVRGTEARGRIGPDLTHVGSRMSLAAGMMPNDVDAFARWIVENQHIKPENKMPPFRQFGEEELT
ALAAYLDSLE
>Mature_330_residues
MRRGAGRVVLLSIASALSGCSGVQSALSPSGVEALRIDPLFWTATGVSVAVTLMVVVLMALALYGPPRWRSWLGGDRVII
GGGVVLPIVVLTGLFIYGLFVMQAGAVRSAREGEATVTIIGKLWWWEVVYQGPDGEEIVSANELRLPAGRPVRLRLESDN
VIHSFWAPQIAGKLDMIPGRTNEVVVEATAPGISRGQCAEYCGGAHALMAFYVVAMAPDEYDAWLAREAGPAPEPLTEGE
ARGRQVFLENGCGGCHQVRGTEARGRIGPDLTHVGSRMSLAAGMMPNDVDAFARWIVENQHIKPENKMPPFRQFGEEELT
ALAAYLDSLE

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=143, Percent_Identity=28.6713286713287, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1786635, Length=286, Percent_Identity=23.4265734265734, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 35478; Mature: 35478

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00078 COX2 ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGAGRVVLLSIASALSGCSGVQSALSPSGVEALRIDPLFWTATGVSVAVTLMVVVLMA
CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHH
LALYGPPRWRSWLGGDRVIIGGGVVLPIVVLTGLFIYGLFVMQAGAVRSAREGEATVTII
HHHCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
GKLWWWEVVYQGPDGEEIVSANELRLPAGRPVRLRLESDNVIHSFWAPQIAGKLDMIPGR
EHHEEEEEEEECCCCHHHCCCCCEECCCCCCEEEEECCCCEEHHHHHHHHCCCEECCCCC
TNEVVVEATAPGISRGQCAEYCGGAHALMAFYVVAMAPDEYDAWLAREAGPAPEPLTEGE
CCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
ARGRQVFLENGCGGCHQVRGTEARGRIGPDLTHVGSRMSLAAGMMPNDVDAFARWIVENQ
CCCCEEEEECCCCCHHHCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHCCC
HIKPENKMPPFRQFGEEELTALAAYLDSLE
CCCCCCCCCHHHHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRGAGRVVLLSIASALSGCSGVQSALSPSGVEALRIDPLFWTATGVSVAVTLMVVVLMA
CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHH
LALYGPPRWRSWLGGDRVIIGGGVVLPIVVLTGLFIYGLFVMQAGAVRSAREGEATVTII
HHHCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
GKLWWWEVVYQGPDGEEIVSANELRLPAGRPVRLRLESDNVIHSFWAPQIAGKLDMIPGR
EHHEEEEEEEECCCCHHHCCCCCEECCCCCCEEEEECCCCEEHHHHHHHHCCCEECCCCC
TNEVVVEATAPGISRGQCAEYCGGAHALMAFYVVAMAPDEYDAWLAREAGPAPEPLTEGE
CCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
ARGRQVFLENGCGGCHQVRGTEARGRIGPDLTHVGSRMSLAAGMMPNDVDAFARWIVENQ
CCCCEEEEECCCCCHHHCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHCCC
HIKPENKMPPFRQFGEEELTALAAYLDSLE
CCCCCCCCCHHHHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]