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The map label for this gene is 110635106

Identifier: 110635106

GI number: 110635106

Start: 3020070

End: 3021263

Strand: Reverse

Name: 110635106

Synonym: Meso_2773

Alternate gene names: NA

Gene position: 3021263-3020070 (Counterclockwise)

Preceding gene: 110635107

Following gene: 110635103

Centisome position: 68.47

GC content: 60.47

Gene sequence:

>1194_bases
TTGCTGGTGCGCGAGAGGAACAATCGGCATTGCCGCTCATTAGGCCAGACGCGTCATTCGGTGGGCAGGGAGTTCATGCT
GGACGTTCTGGAAAGTTCAAAGATCACGCCGCATGATCCCGTGGAGGATGCGCTGCGGGCGGATCTCACTTATGTCAACG
ACAGCGAGCCGGGGATCGTAAGGCGGCGTGCCGGCAAAGGTTTCTACTACCTCGCGCCGGACGGTGCGCGCGTGGAGAAT
CCTGAAACGCTCGCCCGCATCCGTAAGCTTGCCATCCCTCCAGCCTGGATAGACGTATGGATCTGCGTGCGGCCTGATGG
CCACATCCAGGCCACCGGTCGCGACCAGCGCGGGCGCAAGCAGTACCGGTATCACGAAGCGTGGTTCACCTGTAGGGATG
AAGCAAAGTTCTCGAGCCTCGTTGCATTCGCCGAAGCGCTTCCAAGCCTTCGGGCGCAGGTGGACGGGGATTTGTCCCGC
CGCGGCGTTCCGATCGAGCGTGCCATCGCCTCGATTGTCTGGCTGCTCGACAATACGATGATCCGCATCGGAAACGAGAC
TTACACAAAGGAAAACAAGAGCTTCGGGCTGACAACCCTGCGCAGCCGCCATGTGGAAATCGAGGGTTCGAGCCTGCGGT
TTTCATTCAGAGGCAAATCAGGGCAGGAATGGAAGCTGAAGCTGGCGGATCGCAGAATCGCGCGGATCGTGCGTACGATC
CAGGAGCTGCCGGGCCAACAGCTGTTTCAATATATGGAGGAGGACGGGGCCCGCCGACCGGTGACCTCCCAGGACGTCAA
TGAATATATTCGGACCTATGCCGGCGGGGCTTTCACCTCCAAGCATTTCCGTACGTGGGGCGCGACGCGGGCGGCCGCAA
TTCTTCTTGCCGTCGAACCTCCGGAAACCAGCAAGCGGGGAAGAAACCGGCAGATCAACGCTATCGTGGACCGGGTCGCC
CGGCGGTTAAACAACACCCGCGCGGTCTGCCGTCGCTGTTACATCCATCCAAAAGTCATCGAAGCTTGGGAGGAAGGCAG
GCTGGCCAGCGAGATGCTGGAGATACGCCGCCGACATCGCAAGCCGCTGAAGGGTTTGAGCGGAGAAGAGTCGCTGGTGC
TGCGCTGGCTGCGTGGTAATGGGACCGGTTCTCAACGGAACCAAGCATCCGTCCTCGACGTTGGCAGCACATGA

Upstream 100 bases:

>100_bases
CAATCCTTTTTCCGCAAGGTTTGTCGCCATATCGCATGCTTGGCAATCGTTGAACCCGGAATTCGCATGGTTTTCTGCCG
GAAACTGCTCTTTTTCCATG

Downstream 100 bases:

>100_bases
GGACGCGCGAGCAGAAGAATTTTTTTCGCAGCCTCATGGCGGAGCTTCTGCCAGGCTGGATCAAACAGAAGCGGCAAGAA
CCGCGTTTTCGGCCCCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MLVRERNNRHCRSLGQTRHSVGREFMLDVLESSKITPHDPVEDALRADLTYVNDSEPGIVRRRAGKGFYYLAPDGARVEN
PETLARIRKLAIPPAWIDVWICVRPDGHIQATGRDQRGRKQYRYHEAWFTCRDEAKFSSLVAFAEALPSLRAQVDGDLSR
RGVPIERAIASIVWLLDNTMIRIGNETYTKENKSFGLTTLRSRHVEIEGSSLRFSFRGKSGQEWKLKLADRRIARIVRTI
QELPGQQLFQYMEEDGARRPVTSQDVNEYIRTYAGGAFTSKHFRTWGATRAAAILLAVEPPETSKRGRNRQINAIVDRVA
RRLNNTRAVCRRCYIHPKVIEAWEEGRLASEMLEIRRRHRKPLKGLSGEESLVLRWLRGNGTGSQRNQASVLDVGST

Sequences:

>Translated_397_residues
MLVRERNNRHCRSLGQTRHSVGREFMLDVLESSKITPHDPVEDALRADLTYVNDSEPGIVRRRAGKGFYYLAPDGARVEN
PETLARIRKLAIPPAWIDVWICVRPDGHIQATGRDQRGRKQYRYHEAWFTCRDEAKFSSLVAFAEALPSLRAQVDGDLSR
RGVPIERAIASIVWLLDNTMIRIGNETYTKENKSFGLTTLRSRHVEIEGSSLRFSFRGKSGQEWKLKLADRRIARIVRTI
QELPGQQLFQYMEEDGARRPVTSQDVNEYIRTYAGGAFTSKHFRTWGATRAAAILLAVEPPETSKRGRNRQINAIVDRVA
RRLNNTRAVCRRCYIHPKVIEAWEEGRLASEMLEIRRRHRKPLKGLSGEESLVLRWLRGNGTGSQRNQASVLDVGST
>Mature_397_residues
MLVRERNNRHCRSLGQTRHSVGREFMLDVLESSKITPHDPVEDALRADLTYVNDSEPGIVRRRAGKGFYYLAPDGARVEN
PETLARIRKLAIPPAWIDVWICVRPDGHIQATGRDQRGRKQYRYHEAWFTCRDEAKFSSLVAFAEALPSLRAQVDGDLSR
RGVPIERAIASIVWLLDNTMIRIGNETYTKENKSFGLTTLRSRHVEIEGSSLRFSFRGKSGQEWKLKLADRRIARIVRTI
QELPGQQLFQYMEEDGARRPVTSQDVNEYIRTYAGGAFTSKHFRTWGATRAAAILLAVEPPETSKRGRNRQINAIVDRVA
RRLNNTRAVCRRCYIHPKVIEAWEEGRLASEMLEIRRRHRKPLKGLSGEESLVLRWLRGNGTGSQRNQASVLDVGST

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45398; Mature: 45398

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRERNNRHCRSLGQTRHSVGREFMLDVLESSKITPHDPVEDALRADLTYVNDSEPGIV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEECCCCCCCE
RRRAGKGFYYLAPDGARVENPETLARIRKLAIPPAWIDVWICVRPDGHIQATGRDQRGRK
EEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEECCCCCCCHH
QYRYHEAWFTCRDEAKFSSLVAFAEALPSLRAQVDGDLSRRGVPIERAIASIVWLLDNTM
HHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCE
IRIGNETYTKENKSFGLTTLRSRHVEIEGSSLRFSFRGKSGQEWKLKLADRRIARIVRTI
EEECCCHHCCCCCCCCCEEHHCCEEEEECCEEEEEECCCCCCCEEEEHHHHHHHHHHHHH
QELPGQQLFQYMEEDGARRPVTSQDVNEYIRTYAGGAFTSKHFRTWGATRAAAILLAVEP
HHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEECC
PETSKRGRNRQINAIVDRVARRLNNTRAVCRRCYIHPKVIEAWEEGRLASEMLEIRRRHR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHC
KPLKGLSGEESLVLRWLRGNGTGSQRNQASVLDVGST
CCCCCCCCCHHHEEEEECCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MLVRERNNRHCRSLGQTRHSVGREFMLDVLESSKITPHDPVEDALRADLTYVNDSEPGIV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEECCCCCCCE
RRRAGKGFYYLAPDGARVENPETLARIRKLAIPPAWIDVWICVRPDGHIQATGRDQRGRK
EEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEECCCCCCCHH
QYRYHEAWFTCRDEAKFSSLVAFAEALPSLRAQVDGDLSRRGVPIERAIASIVWLLDNTM
HHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCE
IRIGNETYTKENKSFGLTTLRSRHVEIEGSSLRFSFRGKSGQEWKLKLADRRIARIVRTI
EEECCCHHCCCCCCCCCEEHHCCEEEEECCEEEEEECCCCCCCEEEEHHHHHHHHHHHHH
QELPGQQLFQYMEEDGARRPVTSQDVNEYIRTYAGGAFTSKHFRTWGATRAAAILLAVEP
HHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEECC
PETSKRGRNRQINAIVDRVARRLNNTRAVCRRCYIHPKVIEAWEEGRLASEMLEIRRRHR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHC
KPLKGLSGEESLVLRWLRGNGTGSQRNQASVLDVGST
CCCCCCCCCHHHEEEEECCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA