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The map label for this gene is 110635103

Identifier: 110635103

GI number: 110635103

Start: 3018107

End: 3018691

Strand: Reverse

Name: 110635103

Synonym: Meso_2770

Alternate gene names: NA

Gene position: 3018691-3018107 (Counterclockwise)

Preceding gene: 110635106

Following gene: 110635102

Centisome position: 68.41

GC content: 58.63

Gene sequence:

>585_bases
ATGCAAGTTCCGCTACAGATTGCGTTCCACAAAGCCGAAAAATCGGATTGGGCGGAACAGGAGATCCGCGCCAGAGTAGA
CAAACTGCAAACCTACCATGACCGGATCATCGGCTGCCGCGTGACAGTCGACCAAAGAGCACGCAACGTGGAAGGCACGC
TGCCGCCGGTCGTGCGCATTGAGATAAGCCTTCCGGGAACCGCGCCAGTCATCGTGGCTTACGAGCCGGATCGGCTGCAA
CAGAAATACCAGTCACCGGATCTGGGCAATGCCATCAATGACGCCTTCAACCTGGCCGAACGGCGGCTTGCGCAGATCAA
GGAAGCGCGCGACGGGCGCAACAAGGACGGGCATCACGATAGCCAGAGGCAGTTCCTTGGGCAGGTGGCGCAGCTTTACC
CCAACGAGGACCACGGTTTCCTGCTCACGAATGAAGGCAGCAGCCTCTATTTTCACCGCAATTCACTGCTGCAAGGCGAC
TTCGACCAGCTGAAGGTCGGCGACGAAGTCCGCTACGTGGAAGAGGTTGGCGACACGGGGCCACTGGCCACGAAGGTCAG
GGTGATTTCCAACAACAAGGCTTGA

Upstream 100 bases:

>100_bases
GTCCGCTACACCGGCTGGTTCCGGTGCCAGCCGGCATGGGAACAACCGCCACACTGCGGCGGTTAATGCGCAAGATGCCT
GCGGCAGATGCGAGGTGAAT

Downstream 100 bases:

>100_bases
TTTGATGGTTCGGAGCGCGCGCTGGGCGCGCGGCGGCGAACGCTTGCTTCTCTGCCCGCCCGCGAAGGGCTGGTTGCGCC
TCCACGGGTTCCAAAAGCTC

Product: cold-shock protein, DNA-binding

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQVPLQIAFHKAEKSDWAEQEIRARVDKLQTYHDRIIGCRVTVDQRARNVEGTLPPVVRIEISLPGTAPVIVAYEPDRLQ
QKYQSPDLGNAINDAFNLAERRLAQIKEARDGRNKDGHHDSQRQFLGQVAQLYPNEDHGFLLTNEGSSLYFHRNSLLQGD
FDQLKVGDEVRYVEEVGDTGPLATKVRVISNNKA

Sequences:

>Translated_194_residues
MQVPLQIAFHKAEKSDWAEQEIRARVDKLQTYHDRIIGCRVTVDQRARNVEGTLPPVVRIEISLPGTAPVIVAYEPDRLQ
QKYQSPDLGNAINDAFNLAERRLAQIKEARDGRNKDGHHDSQRQFLGQVAQLYPNEDHGFLLTNEGSSLYFHRNSLLQGD
FDQLKVGDEVRYVEEVGDTGPLATKVRVISNNKA
>Mature_194_residues
MQVPLQIAFHKAEKSDWAEQEIRARVDKLQTYHDRIIGCRVTVDQRARNVEGTLPPVVRIEISLPGTAPVIVAYEPDRLQ
QKYQSPDLGNAINDAFNLAERRLAQIKEARDGRNKDGHHDSQRQFLGQVAQLYPNEDHGFLLTNEGSSLYFHRNSLLQGD
FDQLKVGDEVRYVEEVGDTGPLATKVRVISNNKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21972; Mature: 21972

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVPLQIAFHKAEKSDWAEQEIRARVDKLQTYHDRIIGCRVTVDQRARNVEGTLPPVVRI
CCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHCCCCCCCCCCEEEE
EISLPGTAPVIVAYEPDRLQQKYQSPDLGNAINDAFNLAERRLAQIKEARDGRNKDGHHD
EEECCCCCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
SQRQFLGQVAQLYPNEDHGFLLTNEGSSLYFHRNSLLQGDFDQLKVGDEVRYVEEVGDTG
HHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHCCCCC
PLATKVRVISNNKA
CCEEEEEEECCCCC
>Mature Secondary Structure
MQVPLQIAFHKAEKSDWAEQEIRARVDKLQTYHDRIIGCRVTVDQRARNVEGTLPPVVRI
CCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHCCCCCCCCCCEEEE
EISLPGTAPVIVAYEPDRLQQKYQSPDLGNAINDAFNLAERRLAQIKEARDGRNKDGHHD
EEECCCCCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
SQRQFLGQVAQLYPNEDHGFLLTNEGSSLYFHRNSLLQGDFDQLKVGDEVRYVEEVGDTG
HHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHCCCCC
PLATKVRVISNNKA
CCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA