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The map label for this gene is yebE [H]

Identifier: 110635057

GI number: 110635057

Start: 2960482

End: 2961174

Strand: Reverse

Name: yebE [H]

Synonym: Meso_2723

Alternate gene names: 110635057

Gene position: 2961174-2960482 (Counterclockwise)

Preceding gene: 110635058

Following gene: 110635056

Centisome position: 67.11

GC content: 64.65

Gene sequence:

>693_bases
ATGATCGATCCGAAAAAGCTGCTTGAAGGATTTTTGGGTTCTCGCACATCGGGGTCTCCGCTCGGAGGCCAGGCCGACAA
GCTGACCCGGTTTGCGAAGGACAACCCGATCGCCACCGGAGCGATCGTGGCTGCTTTGCTCGGGACGGGCACGGGGCGAA
AACTTGCCAAAAACGCTCTGAAGGTCGGCGGCATGGCCGCGATCGCTGGGCTCGCCTACAAGGCCTATCAGGATTATCAG
GCAGGCAAGAGGCCGGGCGAGGGGGTGAAGGAAGGCACTCTCCTGCCGCCGCCCCAGGACACCGGTTTCAATCCGGCGCT
CGCGCCGCAGGGGGAGGATCAATTCGCCCTGACGCTGGTGCGCGCCATGATCGCGGCGGCGCGCGCCGACGGGCATATCG
ACGAGACGGAGCGGCGGAAAATCTCGGAGCGGCTCAAATCGAGCGGCATCGACGAGGAAGTTGAAAGCTTCCTCATAGAG
GAACTGGGCCGGCCGGTGGATGTCGACGCGCTCATAGGGGCCGCCCAGACGGAGGAGCAGAGAGTTGAGCTCTACACGGC
GTCCCGGCTTGCCATCGAGCCCAGGACGCGCGCGGAGCGCGGCTATCTCGACATGCTCGCCGGCCGTCTCAACCTGCCGG
ATGCACTCGTGGACCATATCGAGGCCACGGTGGCGGAAACGGTCTCGGTCTGA

Upstream 100 bases:

>100_bases
CCCCAACGGGCGCCTTCCATCTTCACAGTATTCCAAACAGCCCCTTTCCATCGGGCGCGGCGCTGCCTAACTGTGGAGAG
GATTTTTGCAGGAGAGCGCC

Downstream 100 bases:

>100_bases
CCCGGTTCTTGCCAAAATCCGTGCGCCGGGCATAAGGTGCACCCGTATCGCCTTTGGATGGCGGTGCGGGCGGCGGTGAT
CGGCCGCCTCTGTGCTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MIDPKKLLEGFLGSRTSGSPLGGQADKLTRFAKDNPIATGAIVAALLGTGTGRKLAKNALKVGGMAAIAGLAYKAYQDYQ
AGKRPGEGVKEGTLLPPPQDTGFNPALAPQGEDQFALTLVRAMIAAARADGHIDETERRKISERLKSSGIDEEVESFLIE
ELGRPVDVDALIGAAQTEEQRVELYTASRLAIEPRTRAERGYLDMLAGRLNLPDALVDHIEATVAETVSV

Sequences:

>Translated_230_residues
MIDPKKLLEGFLGSRTSGSPLGGQADKLTRFAKDNPIATGAIVAALLGTGTGRKLAKNALKVGGMAAIAGLAYKAYQDYQ
AGKRPGEGVKEGTLLPPPQDTGFNPALAPQGEDQFALTLVRAMIAAARADGHIDETERRKISERLKSSGIDEEVESFLIE
ELGRPVDVDALIGAAQTEEQRVELYTASRLAIEPRTRAERGYLDMLAGRLNLPDALVDHIEATVAETVSV
>Mature_230_residues
MIDPKKLLEGFLGSRTSGSPLGGQADKLTRFAKDNPIATGAIVAALLGTGTGRKLAKNALKVGGMAAIAGLAYKAYQDYQ
AGKRPGEGVKEGTLLPPPQDTGFNPALAPQGEDQFALTLVRAMIAAARADGHIDETERRKISERLKSSGIDEEVESFLIE
ELGRPVDVDALIGAAQTEEQRVELYTASRLAIEPRTRAERGYLDMLAGRLNLPDALVDHIEATVAETVSV

Specific function: Unknown

COG id: COG2979

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788151, Length=168, Percent_Identity=30.3571428571429, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007486 [H]

Pfam domain/function: PF04391 DUF533 [H]

EC number: NA

Molecular weight: Translated: 24450; Mature: 24450

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPKKLLEGFLGSRTSGSPLGGQADKLTRFAKDNPIATGAIVAALLGTGTGRKLAKNAL
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
KVGGMAAIAGLAYKAYQDYQAGKRPGEGVKEGTLLPPPQDTGFNPALAPQGEDQFALTLV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
RAMIAAARADGHIDETERRKISERLKSSGIDEEVESFLIEELGRPVDVDALIGAAQTEEQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCHHH
RVELYTASRLAIEPRTRAERGYLDMLAGRLNLPDALVDHIEATVAETVSV
HHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDPKKLLEGFLGSRTSGSPLGGQADKLTRFAKDNPIATGAIVAALLGTGTGRKLAKNAL
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
KVGGMAAIAGLAYKAYQDYQAGKRPGEGVKEGTLLPPPQDTGFNPALAPQGEDQFALTLV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
RAMIAAARADGHIDETERRKISERLKSSGIDEEVESFLIEELGRPVDVDALIGAAQTEEQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCHHH
RVELYTASRLAIEPRTRAERGYLDMLAGRLNLPDALVDHIEATVAETVSV
HHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]