Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110634937

Identifier: 110634937

GI number: 110634937

Start: 2799319

End: 2799804

Strand: Reverse

Name: 110634937

Synonym: Meso_2596

Alternate gene names: NA

Gene position: 2799804-2799319 (Counterclockwise)

Preceding gene: 110634942

Following gene: 110634934

Centisome position: 63.45

GC content: 55.35

Gene sequence:

>486_bases
ATGCCCAAACTCCAGGAAATCCTTCTTCTCGTCGGGCAGCTCAACTATACGTGGACCAATACCGAAAGCCTGCTCATCTA
TCTCATCGGCGGGCTCGCAGGGGTGGACAAGGAAACGGCGATCGTCGTTTTCCTGACGCTCAACACGACGCGCGCGCGCA
TCGACCTTGTCGAACGCTTGGCGAAAATGCAGAAGACGCCGCCGGAATGCCGGGCGGATATCCTGCAAGTCACAGGCCGT
CTTTCGAAGGAAGCGGTGCTCCGCAACAAGTTCAACCACTGCATCTATTCGTTCGACCCGGAAAGCGGGCGCGGCATCAC
GCAGCTGATGCGCATTTTCGAGAGCAGAGACGAAATAAAATACGGGAAGGTGGAAAGCCTTGATGAGCGGGAATTGGCGA
GGATCAGGAAAAGCATCGCTTCCCTGATCGAGCTCAACAAGACTATCTGGGCAGTCGCCCGGAAGTACGAATTTCCAATA
TCCTGA

Upstream 100 bases:

>100_bases
GCTAAAAGGCCGGGCGACTACGCCAATCGATGGATTTCGCCGGTGCCTCGATCCGCTACACTTGGCTGTTCCGCCCTGGG
CGGCAATGCGGGGGATGCCA

Downstream 100 bases:

>100_bases
CGGTCAGACTCTAGGGACCCTCCGGTGCCGCCTCGTCGCCATTAAGCCGCTGTGCGAGCCCTTCAGGATCAAGCGGCTGT
CCGGCAAGCACCAGTTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPKLQEILLLVGQLNYTWTNTESLLIYLIGGLAGVDKETAIVVFLTLNTTRARIDLVERLAKMQKTPPECRADILQVTGR
LSKEAVLRNKFNHCIYSFDPESGRGITQLMRIFESRDEIKYGKVESLDERELARIRKSIASLIELNKTIWAVARKYEFPI
S

Sequences:

>Translated_161_residues
MPKLQEILLLVGQLNYTWTNTESLLIYLIGGLAGVDKETAIVVFLTLNTTRARIDLVERLAKMQKTPPECRADILQVTGR
LSKEAVLRNKFNHCIYSFDPESGRGITQLMRIFESRDEIKYGKVESLDERELARIRKSIASLIELNKTIWAVARKYEFPI
S
>Mature_160_residues
PKLQEILLLVGQLNYTWTNTESLLIYLIGGLAGVDKETAIVVFLTLNTTRARIDLVERLAKMQKTPPECRADILQVTGRL
SKEAVLRNKFNHCIYSFDPESGRGITQLMRIFESRDEIKYGKVESLDERELARIRKSIASLIELNKTIWAVARKYEFPIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18458; Mature: 18327

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLQEILLLVGQLNYTWTNTESLLIYLIGGLAGVDKETAIVVFLTLNTTRARIDLVERL
CCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHH
AKMQKTPPECRADILQVTGRLSKEAVLRNKFNHCIYSFDPESGRGITQLMRIFESRDEIK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCC
YGKVESLDERELARIRKSIASLIELNKTIWAVARKYEFPIS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PKLQEILLLVGQLNYTWTNTESLLIYLIGGLAGVDKETAIVVFLTLNTTRARIDLVERL
CHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHH
AKMQKTPPECRADILQVTGRLSKEAVLRNKFNHCIYSFDPESGRGITQLMRIFESRDEIK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCC
YGKVESLDERELARIRKSIASLIELNKTIWAVARKYEFPIS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA