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The map label for this gene is exoF [H]

Identifier: 110634934

GI number: 110634934

Start: 2795052

End: 2796380

Strand: Reverse

Name: exoF [H]

Synonym: Meso_2593

Alternate gene names: 110634934

Gene position: 2796380-2795052 (Counterclockwise)

Preceding gene: 110634937

Following gene: 110634933

Centisome position: 63.37

GC content: 62.08

Gene sequence:

>1329_bases
ATGTGCGGGATCGATACGGATAGGAAGCCTGTATTCTCCTTGGCGCGACTGGCTCCTGCCGCCATCGCTCTTATGGCCTG
TGTTGGCTCCGTAGCTGCAAGCGCTGAGGAACTGTTCCTGCTCCGGCCGCAGACACGGGTGAAAGTGACCGTCCTCGAAT
GGATGCCCACCGCCGGCGAATATCGTGAATGGACCGCGCTCAACGGCGAATATGTGGTTTCGACAGCAGGTTCCATATCG
GTGCCTCTGGTGGGCGAGGTGTCCGCCGACGGACGCACAGTGCTGGAGGTGGCGGGCCGCATTGCCGAGGCGCTGCGGCA
GCAGACCGGTCTGGTCAATCCGCCAGCGACCTCGGTCGAGGTGGTGCGGTATCCCTCCATATATGTGAATGGCAGCGTCG
ACCGGCCTGGCGAGTTCGAATACCGGCCGGGGCTAACCGTGCTTCAGGCGCTTGCCATGGCTGGCGGGCGGGTAAGAAGG
ACCGATCCACTCGGCGGCTATTCCGAGCTGGAGCAGATCCGATATGTGGGCAAACTCGGTCGCGCGGAGCTCGAAATGAA
TCGCAGCGCCGTCAAGCAAGCGCGCCTGGAAGCCGAGCTGCAGGAGAAATCCACGATCGAACTGCCGGCGGAGCTCCAGC
AAGGGAGCGCCAAGCAGTCCGTTGAGGCGATCCTTCGGGAGGAGGAGGCTATTTTCAGTGCCCGCACGGATTCTTTCGCG
CGGCAGCTCCGCTCACTTGAGGAGCTTTCGGCGCTGTTCGCGGAAGAAATCAAGGTTCTCGAAGAGAAGATGGCGGCGCA
GGACCGGCAGGTGAGCATCGCCGAAGCCGAGCTGAAGGACATTTCGAAGCTGGTGAACAGCGGCACGGTGACCAAATCGC
GGGAAACGAGCCTGGAGCGCATTCTGGCTGACCTGCAGAGCGACCGGCTGGATCTCGCTATCGCTTCGATGCGGGCCAAA
CAGAGACTGAGCGAGACGGAACGCGATATCGTAAACCTGAAGAGCCAGCGCAAGACGGAGATCGTCCGCGATCTTCAGGT
CGTGAATTCCGAGCTTGAAGAGCTTCGGCTCAGGCGCGAGATCTCGCGGCAGCTCCTCCAGGCCACAGGAGCCTCGATCT
CGAGGCGCGGCATGGAGCTGATGATGGACAATCAGACGCTCAGCTTTTTCATCGTGCGCGGCGGTGACAATGGCGAGACT
TTTCAGGCGTCGCCTGCAACGCGCCTGGAACCGGGCGATGTGCTTGAGGTGCGCCTGGATTTTCCGGAGATGGCCGCGGG
AACCGCGCCGTCCGCGCCTGCGGCATCCGTCAACCTTCTTTCGCGGTGA

Upstream 100 bases:

>100_bases
AGGCCCCGCGGGCTTTACCGCGCCGGGAAACGAAGGAAGATCGGTAACGGCCAGGGCTCGTCGCATGCCCGGTCAATGCT
GATGCCTCAGGGGGGCTCTC

Downstream 100 bases:

>100_bases
AGTAGGACCAGGAAGGCGCTAGAGGCGGGGGAACCAATGGTTATTCAGGAAATTCGCAAGTTCGGCGGAGAGCGTGGCGC
TTCGGCCCAGGGGAAAGAAT

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MCGIDTDRKPVFSLARLAPAAIALMACVGSVAASAEELFLLRPQTRVKVTVLEWMPTAGEYREWTALNGEYVVSTAGSIS
VPLVGEVSADGRTVLEVAGRIAEALRQQTGLVNPPATSVEVVRYPSIYVNGSVDRPGEFEYRPGLTVLQALAMAGGRVRR
TDPLGGYSELEQIRYVGKLGRAELEMNRSAVKQARLEAELQEKSTIELPAELQQGSAKQSVEAILREEEAIFSARTDSFA
RQLRSLEELSALFAEEIKVLEEKMAAQDRQVSIAEAELKDISKLVNSGTVTKSRETSLERILADLQSDRLDLAIASMRAK
QRLSETERDIVNLKSQRKTEIVRDLQVVNSELEELRLRREISRQLLQATGASISRRGMELMMDNQTLSFFIVRGGDNGET
FQASPATRLEPGDVLEVRLDFPEMAAGTAPSAPAASVNLLSR

Sequences:

>Translated_442_residues
MCGIDTDRKPVFSLARLAPAAIALMACVGSVAASAEELFLLRPQTRVKVTVLEWMPTAGEYREWTALNGEYVVSTAGSIS
VPLVGEVSADGRTVLEVAGRIAEALRQQTGLVNPPATSVEVVRYPSIYVNGSVDRPGEFEYRPGLTVLQALAMAGGRVRR
TDPLGGYSELEQIRYVGKLGRAELEMNRSAVKQARLEAELQEKSTIELPAELQQGSAKQSVEAILREEEAIFSARTDSFA
RQLRSLEELSALFAEEIKVLEEKMAAQDRQVSIAEAELKDISKLVNSGTVTKSRETSLERILADLQSDRLDLAIASMRAK
QRLSETERDIVNLKSQRKTEIVRDLQVVNSELEELRLRREISRQLLQATGASISRRGMELMMDNQTLSFFIVRGGDNGET
FQASPATRLEPGDVLEVRLDFPEMAAGTAPSAPAASVNLLSR
>Mature_442_residues
MCGIDTDRKPVFSLARLAPAAIALMACVGSVAASAEELFLLRPQTRVKVTVLEWMPTAGEYREWTALNGEYVVSTAGSIS
VPLVGEVSADGRTVLEVAGRIAEALRQQTGLVNPPATSVEVVRYPSIYVNGSVDRPGEFEYRPGLTVLQALAMAGGRVRR
TDPLGGYSELEQIRYVGKLGRAELEMNRSAVKQARLEAELQEKSTIELPAELQQGSAKQSVEAILREEEAIFSARTDSFA
RQLRSLEELSALFAEEIKVLEEKMAAQDRQVSIAEAELKDISKLVNSGTVTKSRETSLERILADLQSDRLDLAIASMRAK
QRLSETERDIVNLKSQRKTEIVRDLQVVNSELEELRLRREISRQLLQATGASISRRGMELMMDNQTLSFFIVRGGDNGET
FQASPATRLEPGDVLEVRLDFPEMAAGTAPSAPAASVNLLSR

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 48492; Mature: 48492

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGIDTDRKPVFSLARLAPAAIALMACVGSVAASAEELFLLRPQTRVKVTVLEWMPTAGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEEEEEECCCCCC
YREWTALNGEYVVSTAGSISVPLVGEVSADGRTVLEVAGRIAEALRQQTGLVNPPATSVE
CCHHEECCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VVRYPSIYVNGSVDRPGEFEYRPGLTVLQALAMAGGRVRRTDPLGGYSELEQIRYVGKLG
EEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHC
RAELEMNRSAVKQARLEAELQEKSTIELPAELQQGSAKQSVEAILREEEAIFSARTDSFA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RQLRSLEELSALFAEEIKVLEEKMAAQDRQVSIAEAELKDISKLVNSGTVTKSRETSLER
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ILADLQSDRLDLAIASMRAKQRLSETERDIVNLKSQRKTEIVRDLQVVNSELEELRLRRE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRQLLQATGASISRRGMELMMDNQTLSFFIVRGGDNGETFQASPATRLEPGDVLEVRLD
HHHHHHHHHCCHHHHCCHHEEECCCEEEEEEEEECCCCCCEECCCCCCCCCCCEEEEEEC
FPEMAAGTAPSAPAASVNLLSR
CHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MCGIDTDRKPVFSLARLAPAAIALMACVGSVAASAEELFLLRPQTRVKVTVLEWMPTAGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEEEEEECCCCCC
YREWTALNGEYVVSTAGSISVPLVGEVSADGRTVLEVAGRIAEALRQQTGLVNPPATSVE
CCHHEECCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VVRYPSIYVNGSVDRPGEFEYRPGLTVLQALAMAGGRVRRTDPLGGYSELEQIRYVGKLG
EEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHC
RAELEMNRSAVKQARLEAELQEKSTIELPAELQQGSAKQSVEAILREEEAIFSARTDSFA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RQLRSLEELSALFAEEIKVLEEKMAAQDRQVSIAEAELKDISKLVNSGTVTKSRETSLER
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ILADLQSDRLDLAIASMRAKQRLSETERDIVNLKSQRKTEIVRDLQVVNSELEELRLRRE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRQLLQATGASISRRGMELMMDNQTLSFFIVRGGDNGETFQASPATRLEPGDVLEVRLD
HHHHHHHHHCCHHHHCCHHEEECCCEEEEEEEEECCCCCCEECCCCCCCCCCCEEEEEEC
FPEMAAGTAPSAPAASVNLLSR
CHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]