| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is proX [C]
Identifier: 110634884
GI number: 110634884
Start: 2724528
End: 2725556
Strand: Reverse
Name: proX [C]
Synonym: Meso_2543
Alternate gene names: 110634884
Gene position: 2725556-2724528 (Counterclockwise)
Preceding gene: 110634885
Following gene: 110634883
Centisome position: 61.77
GC content: 58.79
Gene sequence:
>1029_bases ATGTCTTTGAAAAGAAAATCTCTAGCGGCTGCGGCTTTGTTCCTGCTGGCGGCCACCTCCAACGCCTCTGCCGAAAGCTA TTGCGAGCAGGGCAAGCCCCTGCGTCTCGCCGATGTGTCGTGGGAAAGCGGCGCCTTCCTGACCGAGCTTCTGACAAAGA TCTTCGGCGATGGATATGGCTGCAAGATCGAGAAGGTATCGGGCAATTCCCTGATCATGTCGCATGCGCTCATCACCGGC GACATCGACATCTACCCCGAGCAATGGGTCGGCCGTACCGAAGTCATGAACAAGGCGCGTGCCGAAGGCACGGTGCGTGC GGCCGGGCATCCCTATCTGGACGCGCGCGAGGGTTGGTATGTTCCCGACTATGTCGTCAACGGAGATCCGGAACGCGGAA TCGAGCCGCTTGCGCCGGAGCTGAAGAGCGTTGAGCAACTCGCTGACCCGAAAATCCGGGCACTGTTCAGCGATCCCGAG GAGCCCAGCAAGGGCCGTTTCCTGAACTGCCCGACCGGCTGGAGCTGCGAGCGGCTGAACACCGCCAAGCTTGAGGGATA CGGCCTTGACGAATACTACACCAACTTCCTTCCGGGTTCGGGTGCGGCGCTGGATGCCGAAGTCGCATCGTCCTACCTGC GCAAGCAGCCTGTTCTTTTCTATTACTGGAACCCGACCGCGCTGATGGGCACCTACAAGCTGCTCCAGCTCGAAGAACCG GCATATTCCGACGAATGCTGGGACGGACTGACGAGCAGCGACCCCAAGACCCAAGCTTGTGCGTTCCCGCTCGGCGAAGT GGTTTACGACGTGAACGTGAAATTCGCCGATCAGGCGCCGGACATCATTGAGATCCTCTCGAAAGCGACCATTCCGCTGG AGACCATCAACGAGGCGCTTGCCTATATGGCGAAGGAAAAGGCCGAACCCGCTGATGCAGCTACGTGGTTCCTGAAGAAC TACGCGCATCTCTGGACCAATTGGGTCAGCACCGAAGCGGCAGAAAAAATCAACCAGGGACTGAACTAA
Upstream 100 bases:
>100_bases TCGCCCCAAGCGGAACCGGAACCTTCATACGCCCCCGCGGGGCCAATGCCATTCAAATCGGCGCCTGATCACAATGATCT TTCAATGGGAGTAACCTGAA
Downstream 100 bases:
>100_bases ATCCGGTTGGGCGCACCGCACTTCCGTGCGGTGCGCTTTCCCAAAGCCCTGAAGGAGCGTGCGGTGTTTCCCAAGAGTCT CGAATTCTCGATAAGCCAAC
Product: substrate-binding region of ABC-type glycine betaine transport system
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: Amino Acid ABC Transporter
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSLKRKSLAAAALFLLAATSNASAESYCEQGKPLRLADVSWESGAFLTELLTKIFGDGYGCKIEKVSGNSLIMSHALITG DIDIYPEQWVGRTEVMNKARAEGTVRAAGHPYLDAREGWYVPDYVVNGDPERGIEPLAPELKSVEQLADPKIRALFSDPE EPSKGRFLNCPTGWSCERLNTAKLEGYGLDEYYTNFLPGSGAALDAEVASSYLRKQPVLFYYWNPTALMGTYKLLQLEEP AYSDECWDGLTSSDPKTQACAFPLGEVVYDVNVKFADQAPDIIEILSKATIPLETINEALAYMAKEKAEPADAATWFLKN YAHLWTNWVSTEAAEKINQGLN
Sequences:
>Translated_342_residues MSLKRKSLAAAALFLLAATSNASAESYCEQGKPLRLADVSWESGAFLTELLTKIFGDGYGCKIEKVSGNSLIMSHALITG DIDIYPEQWVGRTEVMNKARAEGTVRAAGHPYLDAREGWYVPDYVVNGDPERGIEPLAPELKSVEQLADPKIRALFSDPE EPSKGRFLNCPTGWSCERLNTAKLEGYGLDEYYTNFLPGSGAALDAEVASSYLRKQPVLFYYWNPTALMGTYKLLQLEEP AYSDECWDGLTSSDPKTQACAFPLGEVVYDVNVKFADQAPDIIEILSKATIPLETINEALAYMAKEKAEPADAATWFLKN YAHLWTNWVSTEAAEKINQGLN >Mature_341_residues SLKRKSLAAAALFLLAATSNASAESYCEQGKPLRLADVSWESGAFLTELLTKIFGDGYGCKIEKVSGNSLIMSHALITGD IDIYPEQWVGRTEVMNKARAEGTVRAAGHPYLDAREGWYVPDYVVNGDPERGIEPLAPELKSVEQLADPKIRALFSDPEE PSKGRFLNCPTGWSCERLNTAKLEGYGLDEYYTNFLPGSGAALDAEVASSYLRKQPVLFYYWNPTALMGTYKLLQLEEPA YSDECWDGLTSSDPKTQACAFPLGEVVYDVNVKFADQAPDIIEILSKATIPLETINEALAYMAKEKAEPADAATWFLKNY AHLWTNWVSTEAAEKINQGLN
Specific function: Member Of A Multicomponent Binding-Protein-Dependent Transport System (The Prou Transporter) Which Serves As The Glycine Betaine/L-Proline Transporter. [C]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37737; Mature: 37606
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKRKSLAAAALFLLAATSNASAESYCEQGKPLRLADVSWESGAFLTELLTKIFGDGYG CCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC CKIEKVSGNSLIMSHALITGDIDIYPEQWVGRTEVMNKARAEGTVRAAGHPYLDAREGWY CEEEEECCCEEEEEEEEEECCCEECCHHHCCHHHHHHHHHHCCEEEECCCCCCCCCCCEE VPDYVVNGDPERGIEPLAPELKSVEQLADPKIRALFSDPEEPSKGRFLNCPTGWSCERLN CCCEEECCCCCCCCCCCCHHHHHHHHHCCCHHEEHCCCCCCCCCCCEEECCCCCCCCCCC TAKLEGYGLDEYYTNFLPGSGAALDAEVASSYLRKQPVLFYYWNPTALMGTYKLLQLEEP CCCCCCCCCHHHHHHCCCCCCCEECHHHHHHHHHHCCEEEEEECCHHHHHHHHEEEECCC AYSDECWDGLTSSDPKTQACAFPLGEVVYDVNVKFADQAPDIIEILSKATIPLETINEAL CCCCHHHCCCCCCCCCCHHHHCCHHHEEEEECEEECCCCCHHHHHHHHCCCCHHHHHHHH AYMAKEKAEPADAATWFLKNYAHLWTNWVSTEAAEKINQGLN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLKRKSLAAAALFLLAATSNASAESYCEQGKPLRLADVSWESGAFLTELLTKIFGDGYG CCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC CKIEKVSGNSLIMSHALITGDIDIYPEQWVGRTEVMNKARAEGTVRAAGHPYLDAREGWY CEEEEECCCEEEEEEEEEECCCEECCHHHCCHHHHHHHHHHCCEEEECCCCCCCCCCCEE VPDYVVNGDPERGIEPLAPELKSVEQLADPKIRALFSDPEEPSKGRFLNCPTGWSCERLN CCCEEECCCCCCCCCCCCHHHHHHHHHCCCHHEEHCCCCCCCCCCCEEECCCCCCCCCCC TAKLEGYGLDEYYTNFLPGSGAALDAEVASSYLRKQPVLFYYWNPTALMGTYKLLQLEEP CCCCCCCCCHHHHHHCCCCCCCEECHHHHHHHHHHCCEEEEEECCHHHHHHHHEEEECCC AYSDECWDGLTSSDPKTQACAFPLGEVVYDVNVKFADQAPDIIEILSKATIPLETINEAL CCCCHHHCCCCCCCCCCHHHHCCHHHEEEEECEEECCCCCHHHHHHHHCCCCHHHHHHHH AYMAKEKAEPADAATWFLKNYAHLWTNWVSTEAAEKINQGLN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA