| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is blh [H]
Identifier: 110634876
GI number: 110634876
Start: 2714757
End: 2715695
Strand: Reverse
Name: blh [H]
Synonym: Meso_2535
Alternate gene names: 110634876
Gene position: 2715695-2714757 (Counterclockwise)
Preceding gene: 110634877
Following gene: 110634875
Centisome position: 61.55
GC content: 60.06
Gene sequence:
>939_bases ATGAGTGAAACCGCCGGAGACCTGCCTCTTCAGCACGCCCGCACGGTCGTCGCCGATGCAGTGGCAAAACCCACCAGGCG TCCGATGGTCAAATCCTTCTTTGACGATCAGACATGCACTGTTAGCCATGTGGCGCGCGACCCGCAGTCAAATGCCTGCG CCATTATCGACAGCGTGCTCGATTACGATGCGGCCTCCGGCCGCACAATGAACAAATCGGCACAGGATCTGATTGACTAC GTAAAATCCGAGAATCTCGAGGTGCAATGGCTGCTGGAGACGCATGCCCATGCCGACCACCTGTCGGCCGCGCCTTTGCT TCAGGCCGAGCTAGGCGGACAGCTTGCTATTGGGCGTGAGATCGTGCGCGTCCAGCAGGTCTTCGGCAAGATCTTCAATG CCGGCACCGAGTTTCAGCGTGATGGCAGCCAGTTCGATCACCTCTTCAATGATGGCGACCGATTCACGATCGGCAATCTA GATGTGACGGTGCTGCATGTGCCGGGCCACACGCCGGCTTGCCTCGCCTATGTTGTGGGGGATGCCGTTTTCCCTGGTGA CACCTTGTTCATGCCCGATTACGGCACGGCACGCTGCGACTTTCCCGGCGGCGACGCCCGCCAACTCTATCGCTCGATCA AACGCCTGTTCCAACTGCCCGACGAGGCCCGTCTTTTCCTCTGCCACGACTACAAGGCTCCCGGCCGGGACTATTTCGCC TGGGAGACGACCGTGGGTGCCGAGCGCACCGGCAATATCCATGTGCGCGAGGGGGTGAGCGAGGACGAGTTCTACAAGAT GCGCACAGAACGCGATGCCACCCTTGCCATGCCGAAACTGATCCTGCCCTCCGTGCAGGTGAACATGCGGGCTGGCCGAT TGCCGCCTGCCGAGGACAACGGCGTGCAGTATCTAAAAATCCCTCTCAATGCGCTGTGA
Upstream 100 bases:
>100_bases GGATCTCGCCTTCCAAAGGCAAGGCGAGGCGTGATATGGGAGGTCAGTGCATGCATTCGGGAAGCTGACAAAATCAATTC CTTATCGAGAAGGTATTCAC
Downstream 100 bases:
>100_bases CGGCAACGAGGCTCGCCGCTTCGTGGCGAGCCATTGCCGTGGGCGCACTTATCTATGGCTCGACCTTTGGACCGGCCCCG CTTGGCGGCGGAGAACTGCT
Product: beta-lactamase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSETAGDLPLQHARTVVADAVAKPTRRPMVKSFFDDQTCTVSHVARDPQSNACAIIDSVLDYDAASGRTMNKSAQDLIDY VKSENLEVQWLLETHAHADHLSAAPLLQAELGGQLAIGREIVRVQQVFGKIFNAGTEFQRDGSQFDHLFNDGDRFTIGNL DVTVLHVPGHTPACLAYVVGDAVFPGDTLFMPDYGTARCDFPGGDARQLYRSIKRLFQLPDEARLFLCHDYKAPGRDYFA WETTVGAERTGNIHVREGVSEDEFYKMRTERDATLAMPKLILPSVQVNMRAGRLPPAEDNGVQYLKIPLNAL
Sequences:
>Translated_312_residues MSETAGDLPLQHARTVVADAVAKPTRRPMVKSFFDDQTCTVSHVARDPQSNACAIIDSVLDYDAASGRTMNKSAQDLIDY VKSENLEVQWLLETHAHADHLSAAPLLQAELGGQLAIGREIVRVQQVFGKIFNAGTEFQRDGSQFDHLFNDGDRFTIGNL DVTVLHVPGHTPACLAYVVGDAVFPGDTLFMPDYGTARCDFPGGDARQLYRSIKRLFQLPDEARLFLCHDYKAPGRDYFA WETTVGAERTGNIHVREGVSEDEFYKMRTERDATLAMPKLILPSVQVNMRAGRLPPAEDNGVQYLKIPLNAL >Mature_311_residues SETAGDLPLQHARTVVADAVAKPTRRPMVKSFFDDQTCTVSHVARDPQSNACAIIDSVLDYDAASGRTMNKSAQDLIDYV KSENLEVQWLLETHAHADHLSAAPLLQAELGGQLAIGREIVRVQQVFGKIFNAGTEFQRDGSQFDHLFNDGDRFTIGNLD VTVLHVPGHTPACLAYVVGDAVFPGDTLFMPDYGTARCDFPGGDARQLYRSIKRLFQLPDEARLFLCHDYKAPGRDYFAW ETTVGAERTGNIHVREGVSEDEFYKMRTERDATLAMPKLILPSVQVNMRAGRLPPAEDNGVQYLKIPLNAL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=294, Percent_Identity=28.9115646258503, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17538952, Length=269, Percent_Identity=26.0223048327138, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI221330176, Length=281, Percent_Identity=28.8256227758007, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 34579; Mature: 34448
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETAGDLPLQHARTVVADAVAKPTRRPMVKSFFDDQTCTVSHVARDPQSNACAIIDSVL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHH DYDAASGRTMNKSAQDLIDYVKSENLEVQWLLETHAHADHLSAAPLLQAELGGQLAIGRE HCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCHHHHHHCCCCCHHHHH IVRVQQVFGKIFNAGTEFQRDGSQFDHLFNDGDRFTIGNLDVTVLHVPGHTPACLAYVVG HHHHHHHHHHHHCCCCCHHCCCHHHHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHH DAVFPGDTLFMPDYGTARCDFPGGDARQLYRSIKRLFQLPDEARLFLCHDYKAPGRDYFA CCCCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEE WETTVGAERTGNIHVREGVSEDEFYKMRTERDATLAMPKLILPSVQVNMRAGRLPPAEDN EEECCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCC GVQYLKIPLNAL CCEEEEEECCCC >Mature Secondary Structure SETAGDLPLQHARTVVADAVAKPTRRPMVKSFFDDQTCTVSHVARDPQSNACAIIDSVL CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHH DYDAASGRTMNKSAQDLIDYVKSENLEVQWLLETHAHADHLSAAPLLQAELGGQLAIGRE HCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCHHHHHHCCCCCHHHHH IVRVQQVFGKIFNAGTEFQRDGSQFDHLFNDGDRFTIGNLDVTVLHVPGHTPACLAYVVG HHHHHHHHHHHHCCCCCHHCCCHHHHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHH DAVFPGDTLFMPDYGTARCDFPGGDARQLYRSIKRLFQLPDEARLFLCHDYKAPGRDYFA CCCCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEE WETTVGAERTGNIHVREGVSEDEFYKMRTERDATLAMPKLILPSVQVNMRAGRLPPAEDN EEECCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCC GVQYLKIPLNAL CCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]