| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is hpcG [H]
Identifier: 110634845
GI number: 110634845
Start: 2682848
End: 2683648
Strand: Reverse
Name: hpcG [H]
Synonym: Meso_2504
Alternate gene names: 110634845
Gene position: 2683648-2682848 (Counterclockwise)
Preceding gene: 110634846
Following gene: 110634844
Centisome position: 60.82
GC content: 60.55
Gene sequence:
>801_bases ATGCTGAGCAGGGCTGAGATCGAACTGGCTGCGGCCGATCTGTTGCGTGCCGAAGAGACGTGCGCTCAGATCGGGCTTCT GTCCATCCGGCACCCCGAGATCACGCTCGACGATGCCTATGCGATTCAGTCGGCCCAGATGGCGCAAAAGCTCGCCAGAG GCCGCAAGATCATCGGCTGGAAAATCGGGCTGACTTCGAAGGTCATGCAGGATGCGCTCGGTATCGACACGCCGGACAGC GGCGTGATCTATGACGATATGGATTTTGCCAGCGGCTCGACGGTCCCCGCAGGCCGGTTCATACAGCCGCGGATCGAGAC GGAGATCGCCTTCGTCATGAAGTCACCGCTCGACGGCAAGGTGTCACGGGAGGACGTGCTCGCCGCCACGGATTACGTTG CACCTGCCATCGAGATCCTCGATACGCGAATCCAGCGAAAGGATCACGAGACAGGCCAGACGCGCAGGATCTTCGACACC GTAGCGGACAATGCCGCCAATGGTGGAATCGTTCTGGGATGCGAACGGCACGGGCCCGAGGACTTCGATCTGCGCTGGGT TGGCGCTATCGTATCCAAGAACGAGCAGGTGGAGGCAACCGGCCTCGGAGCGGCGATTCTCAACGATCCGGTGCAGGGCA TTGTTTGGCTCGCGCGCCGTATGAATCAGTATAATCAGCGGATCGAGGCCGGGCAGGTCGTCCTTGCCGGCTCGTTCATC GCACCGATCGAGTGCCCGCCAGGAACGAAGATCCATGCCGATTTCGGCAGTTTCGGATCTGCTTCGATTACCTTTGCCTG A
Upstream 100 bases:
>100_bases GCGCGAGGTTCGATCCGCCGGTTTGGCTCAAGCCCGGCGATGTGGTGGAGGTCGAAGCCGAAGGCATAGGCATCCTGCGC AACGGCATTGAGGACGAGTG
Downstream 100 bases:
>100_bases AAGGATTGCATCATGCCAGCACCGAGGAACAGCTTCAAGGCGCGGTTGAAGAAGGGAGAGACCCAGATCGGTCTTTGGCT GGGACTTGCCGAAGCAACCA
Product: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
Products: NA
Alternate protein names: OHED hydratase [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLSRAEIELAAADLLRAEETCAQIGLLSIRHPEITLDDAYAIQSAQMAQKLARGRKIIGWKIGLTSKVMQDALGIDTPDS GVIYDDMDFASGSTVPAGRFIQPRIETEIAFVMKSPLDGKVSREDVLAATDYVAPAIEILDTRIQRKDHETGQTRRIFDT VADNAANGGIVLGCERHGPEDFDLRWVGAIVSKNEQVEATGLGAAILNDPVQGIVWLARRMNQYNQRIEAGQVVLAGSFI APIECPPGTKIHADFGSFGSASITFA
Sequences:
>Translated_266_residues MLSRAEIELAAADLLRAEETCAQIGLLSIRHPEITLDDAYAIQSAQMAQKLARGRKIIGWKIGLTSKVMQDALGIDTPDS GVIYDDMDFASGSTVPAGRFIQPRIETEIAFVMKSPLDGKVSREDVLAATDYVAPAIEILDTRIQRKDHETGQTRRIFDT VADNAANGGIVLGCERHGPEDFDLRWVGAIVSKNEQVEATGLGAAILNDPVQGIVWLARRMNQYNQRIEAGQVVLAGSFI APIECPPGTKIHADFGSFGSASITFA >Mature_266_residues MLSRAEIELAAADLLRAEETCAQIGLLSIRHPEITLDDAYAIQSAQMAQKLARGRKIIGWKIGLTSKVMQDALGIDTPDS GVIYDDMDFASGSTVPAGRFIQPRIETEIAFVMKSPLDGKVSREDVLAATDYVAPAIEILDTRIQRKDHETGQTRRIFDT VADNAANGGIVLGCERHGPEDFDLRWVGAIVSKNEQVEATGLGAAILNDPVQGIVWLARRMNQYNQRIEAGQVVLAGSFI APIECPPGTKIHADFGSFGSASITFA
Specific function: Transforms 2-oxo-hept-3-ene-1,7-dioate (OHED) into 2,4- dihydoxy-hept-2-ene-1,7-dioic acid (HHED) [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=270, Percent_Identity=31.8518518518519, Blast_Score=144, Evalue=6e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012690 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: 4.2.1.-
Molecular weight: Translated: 28765; Mature: 28765
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRAEIELAAADLLRAEETCAQIGLLSIRHPEITLDDAYAIQSAQMAQKLARGRKIIGW CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEECHHHHHHHHHHHHHHHCCCEEEEE KIGLTSKVMQDALGIDTPDSGVIYDDMDFASGSTVPAGRFIQPRIETEIAFVMKSPLDGK EECCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCC VSREDVLAATDYVAPAIEILDTRIQRKDHETGQTRRIFDTVADNAANGGIVLGCERHGPE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCC DFDLRWVGAIVSKNEQVEATGLGAAILNDPVQGIVWLARRMNQYNQRIEAGQVVLAGSFI CCCEEEEEHHHCCCCEEEHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCEE APIECPPGTKIHADFGSFGSASITFA EECCCCCCCEEEECCCCCCCCEEEEC >Mature Secondary Structure MLSRAEIELAAADLLRAEETCAQIGLLSIRHPEITLDDAYAIQSAQMAQKLARGRKIIGW CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEECHHHHHHHHHHHHHHHCCCEEEEE KIGLTSKVMQDALGIDTPDSGVIYDDMDFASGSTVPAGRFIQPRIETEIAFVMKSPLDGK EECCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCC VSREDVLAATDYVAPAIEILDTRIQRKDHETGQTRRIFDTVADNAANGGIVLGCERHGPE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCC DFDLRWVGAIVSKNEQVEATGLGAAILNDPVQGIVWLARRMNQYNQRIEAGQVVLAGSFI CCCEEEEEHHHCCCCEEEHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCEE APIECPPGTKIHADFGSFGSASITFA EECCCCCCCEEEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7737515 [H]