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The map label for this gene is 110634842

Identifier: 110634842

GI number: 110634842

Start: 2679169

End: 2680398

Strand: Direct

Name: 110634842

Synonym: Meso_2501

Alternate gene names: NA

Gene position: 2679169-2680398 (Clockwise)

Preceding gene: 110634833

Following gene: 110634843

Centisome position: 60.72

GC content: 62.36

Gene sequence:

>1230_bases
ATGCCGCTCAACCTGCTACAGAAGCTGGAGATCCTGGCCGATGCCGCCAAATACGACGCGTCCTGTGTCTCCTCGGGCGG
CGAAAAGCGGAAGGCAGAAAAGGGCATAGGGTCCGTGACGGGCCAAGGTATCTGTCACGCCTTCACGCCGGACGGGCGCT
GCGTTTCTCTTCTCAAAATTCTGCTGACCAATTTCTGCATCTATGACTGCGTCTATTGCGTGAGCCGCAGATCGAGCAAC
GCGCCGCGCGCGCGCTTCAAGGTGGAGGAGGTCGTTCAGCTCACTCTCGATCTTTATCGTCGTAATTGCATCGAGGGCCT
CTTTCTTTCCTCCGGCATTGCCCGCTCGGCGGACGAAACCATGGCCGATCTGGTGCGCGTTGCGAAAGCTCTGCGGGAGG
AGCACGGGTTTAGGGGATACATTCATCTGAAAACCATTCCGGGCGCGAGCCCTGAGCTCTTGGACGAGGCCGGGCTTTAC
GCTGATCGGCTGTCGATGAATGTGGAGATGCCGGCCGAGGCGGCCCTCGAAAAGCTGGCTCCGGAAAAATCCGCGACTGA
GATAAAGCGCGGCTTGGCGCGTGCCCGCTCCCGCATAGAAGAAGGCAGCGCGCCTTCGCGTGGAGGCAAAGCGCGCCTGC
GGCGCTTCGCGCCGGCGGGGCAGAGCACGCAAATCGTCGTAGGAGCCGATTCCTCCACTGATCTCGATATTCTTCGCAGC
AGCGCACGTCTGTACGCCTCCTATGCACTGCAGCGCGTCTACTATTCCGCCTTTAGCCCAACGGGTCACCCATCGGCCGT
GCTTCCGGCAGAGCCGACGCCGCTTATCCGCGAGCACCGGCTATACCAAACAGACTGGTTGCTGCGCTTTTACGGCTTCT
CTCTGCCGGAAGTGGAGGAGGCTCTGCCCGGCGGCATGCTCGATCTGTCGATCGATCCGAAGCTCGCCTGGGCGCTTTCC
CATCGCGATTTCTTCCCGGTGGACGTCAACAAGGCCAGCCGGGAACTGCTGCTGCGCGTTCCGGGGCTGGGGGTAAAAGC
GGTGGACCGGATCATCGCCGCACGCCGGCACGGCAGCCTGCGCCTTGCGGAGCTGGCGCGGCTCACCGGTTCGCTCAAGC
GCGTTCGGCCGTTTGTACTGACACCCGATTGGCAGCCGGGCAGCCTGCTTGAGCAACCAAGGCTGAGGCAGCGTTTGGTC
GCTCCGCAGCAGCTTTCCCTGGGGCTCTGA

Upstream 100 bases:

>100_bases
AGACGCAGCGCCCCATGCGACGACTTGGCGCCTTTTCGCCCTTGCCTCACCGCCAATACGGCTCTAATTTAGAACAAAAC
AGGAACTTTGGAGCCGGGCC

Downstream 100 bases:

>100_bases
AATGCTGTCCATACCTCTCGGGGAAGATTGCAGCGTGGAAGAGTTCCGTGCGGCCGCGCGGCACTGCCTTGCACGCGGTA
TTGCGCCCGAGGATGTTCAC

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MPLNLLQKLEILADAAKYDASCVSSGGEKRKAEKGIGSVTGQGICHAFTPDGRCVSLLKILLTNFCIYDCVYCVSRRSSN
APRARFKVEEVVQLTLDLYRRNCIEGLFLSSGIARSADETMADLVRVAKALREEHGFRGYIHLKTIPGASPELLDEAGLY
ADRLSMNVEMPAEAALEKLAPEKSATEIKRGLARARSRIEEGSAPSRGGKARLRRFAPAGQSTQIVVGADSSTDLDILRS
SARLYASYALQRVYYSAFSPTGHPSAVLPAEPTPLIREHRLYQTDWLLRFYGFSLPEVEEALPGGMLDLSIDPKLAWALS
HRDFFPVDVNKASRELLLRVPGLGVKAVDRIIAARRHGSLRLAELARLTGSLKRVRPFVLTPDWQPGSLLEQPRLRQRLV
APQQLSLGL

Sequences:

>Translated_409_residues
MPLNLLQKLEILADAAKYDASCVSSGGEKRKAEKGIGSVTGQGICHAFTPDGRCVSLLKILLTNFCIYDCVYCVSRRSSN
APRARFKVEEVVQLTLDLYRRNCIEGLFLSSGIARSADETMADLVRVAKALREEHGFRGYIHLKTIPGASPELLDEAGLY
ADRLSMNVEMPAEAALEKLAPEKSATEIKRGLARARSRIEEGSAPSRGGKARLRRFAPAGQSTQIVVGADSSTDLDILRS
SARLYASYALQRVYYSAFSPTGHPSAVLPAEPTPLIREHRLYQTDWLLRFYGFSLPEVEEALPGGMLDLSIDPKLAWALS
HRDFFPVDVNKASRELLLRVPGLGVKAVDRIIAARRHGSLRLAELARLTGSLKRVRPFVLTPDWQPGSLLEQPRLRQRLV
APQQLSLGL
>Mature_408_residues
PLNLLQKLEILADAAKYDASCVSSGGEKRKAEKGIGSVTGQGICHAFTPDGRCVSLLKILLTNFCIYDCVYCVSRRSSNA
PRARFKVEEVVQLTLDLYRRNCIEGLFLSSGIARSADETMADLVRVAKALREEHGFRGYIHLKTIPGASPELLDEAGLYA
DRLSMNVEMPAEAALEKLAPEKSATEIKRGLARARSRIEEGSAPSRGGKARLRRFAPAGQSTQIVVGADSSTDLDILRSS
ARLYASYALQRVYYSAFSPTGHPSAVLPAEPTPLIREHRLYQTDWLLRFYGFSLPEVEEALPGGMLDLSIDPKLAWALSH
RDFFPVDVNKASRELLLRVPGLGVKAVDRIIAARRHGSLRLAELARLTGSLKRVRPFVLTPDWQPGSLLEQPRLRQRLVA
PQQLSLGL

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45074; Mature: 44942

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNLLQKLEILADAAKYDASCVSSGGEKRKAEKGIGSVTGQGICHAFTPDGRCVSLLKI
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHH
LLTNFCIYDCVYCVSRRSSNAPRARFKVEEVVQLTLDLYRRNCIEGLFLSSGIARSADET
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
MADLVRVAKALREEHGFRGYIHLKTIPGASPELLDEAGLYADRLSMNVEMPAEAALEKLA
HHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCHHHHHCCCCCCCHHHHHHHHC
PEKSATEIKRGLARARSRIEEGSAPSRGGKARLRRFAPAGQSTQIVVGADSSTDLDILRS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH
SARLYASYALQRVYYSAFSPTGHPSAVLPAEPTPLIREHRLYQTDWLLRFYGFSLPEVEE
HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
ALPGGMLDLSIDPKLAWALSHRDFFPVDVNKASRELLLRVPGLGVKAVDRIIAARRHGSL
HCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
RLAELARLTGSLKRVRPFVLTPDWQPGSLLEQPRLRQRLVAPQQLSLGL
HHHHHHHHHHHHHHCCCEEECCCCCCCCHHCCHHHHHHHCCCHHHCCCC
>Mature Secondary Structure 
PLNLLQKLEILADAAKYDASCVSSGGEKRKAEKGIGSVTGQGICHAFTPDGRCVSLLKI
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHH
LLTNFCIYDCVYCVSRRSSNAPRARFKVEEVVQLTLDLYRRNCIEGLFLSSGIARSADET
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
MADLVRVAKALREEHGFRGYIHLKTIPGASPELLDEAGLYADRLSMNVEMPAEAALEKLA
HHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCHHHHHCCCCCCCHHHHHHHHC
PEKSATEIKRGLARARSRIEEGSAPSRGGKARLRRFAPAGQSTQIVVGADSSTDLDILRS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH
SARLYASYALQRVYYSAFSPTGHPSAVLPAEPTPLIREHRLYQTDWLLRFYGFSLPEVEE
HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
ALPGGMLDLSIDPKLAWALSHRDFFPVDVNKASRELLLRVPGLGVKAVDRIIAARRHGSL
HCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
RLAELARLTGSLKRVRPFVLTPDWQPGSLLEQPRLRQRLVAPQQLSLGL
HHHHHHHHHHHHHHCCCEEECCCCCCCCHHCCHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA