| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634824
Identifier: 110634824
GI number: 110634824
Start: 2661220
End: 2662080
Strand: Direct
Name: 110634824
Synonym: Meso_2483
Alternate gene names: NA
Gene position: 2661220-2662080 (Clockwise)
Preceding gene: 110634823
Following gene: 110634825
Centisome position: 60.31
GC content: 55.63
Gene sequence:
>861_bases ATGTCCGATCCGATGCAACAGCTTGCTGAAGCAATTAAGCGCAGAAGCGCCGTCCTGTTCGTTGGTGCGGGGGTATCCAT GAGTGTCGGCCTGCCGTCATGGGACAAGCTGATCAGACAGATGGAGCAGGAACTCGGTATCGATCCTGAAACCACCAAAT CTTCCCGCTATAGCTACCAGACACTCGCCGAATATTACCGTCTGAAGCAGGGCAGCTTAGGCCCGCTGCGGAGTTGGATG GACCGGAACTGGAGCGTTTCGCGCGAAAAGGTGAAAGAATCTCTCCTCCATCGACTGATCGTCGAACTCGACTTTCCAAT CATCTACACCACGAACTACGATCGGAACCTTGAAGTCGCCTTCGAACTCTATGGACGCGATTTCGTGAAGGTCGCCAATG CTCGAGATATCAGCCGGATTGCCGACGGCGTGACGCAGATCATAAAATATCACGGCGATTTCGATGAGGATGCCTCGCTG GTCCTGACGGAAACGGATTACTTCAACCGGCTCTCCTTCGATTCCCCTCTCGACGTGAAATTTCGCGCCGATGCGCTGGG CCGCACAATCCTTTTTATCGGCTATAGCCTGTCCGACATGAACATCAGGCTTCTGCTCCACCGTCTCTGGCAGACCTGGC GCGATTCCGGCTACGAAAAGGACCGCCCGCCCTCCTTCGTTTTCATGCCGAACCGAAATCCCGTGGAGGAGGCGGTTCTG GCGCGGTGGGGCATCACCGCTTTAAGCGAGGAAAGCGAAAGCGCTCAAGAAGCTCTCGGCACGTTCCTGAAGCATTTGCT TCAGATGACGTGCAAGAGCGCGGGCGAGTCCGAAAAACTAGGCCGCACCCAACGTCCTTAG
Upstream 100 bases:
>100_bases GGCCCGCCGCGCTTCTGGCCGGCGGATTAACTTCCCCGCTACCCGTACCGGAACGTAGTCGATTGGCGCTCGTTAGTTCG GACGGCCCCAGGAGCACTGC
Downstream 100 bases:
>100_bases GAAGCGGTGTCTTTGAGCAATCAACGAAAACACCCCACGGCATTGTGGTTCATGGGGGCGTAGTCTATAGGGCGGGCATC GGGCGGACGAAATCGGACGG
Product: putative Sir2-like transcriptional silencer protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSDPMQQLAEAIKRRSAVLFVGAGVSMSVGLPSWDKLIRQMEQELGIDPETTKSSRYSYQTLAEYYRLKQGSLGPLRSWM DRNWSVSREKVKESLLHRLIVELDFPIIYTTNYDRNLEVAFELYGRDFVKVANARDISRIADGVTQIIKYHGDFDEDASL VLTETDYFNRLSFDSPLDVKFRADALGRTILFIGYSLSDMNIRLLLHRLWQTWRDSGYEKDRPPSFVFMPNRNPVEEAVL ARWGITALSEESESAQEALGTFLKHLLQMTCKSAGESEKLGRTQRP
Sequences:
>Translated_286_residues MSDPMQQLAEAIKRRSAVLFVGAGVSMSVGLPSWDKLIRQMEQELGIDPETTKSSRYSYQTLAEYYRLKQGSLGPLRSWM DRNWSVSREKVKESLLHRLIVELDFPIIYTTNYDRNLEVAFELYGRDFVKVANARDISRIADGVTQIIKYHGDFDEDASL VLTETDYFNRLSFDSPLDVKFRADALGRTILFIGYSLSDMNIRLLLHRLWQTWRDSGYEKDRPPSFVFMPNRNPVEEAVL ARWGITALSEESESAQEALGTFLKHLLQMTCKSAGESEKLGRTQRP >Mature_285_residues SDPMQQLAEAIKRRSAVLFVGAGVSMSVGLPSWDKLIRQMEQELGIDPETTKSSRYSYQTLAEYYRLKQGSLGPLRSWMD RNWSVSREKVKESLLHRLIVELDFPIIYTTNYDRNLEVAFELYGRDFVKVANARDISRIADGVTQIIKYHGDFDEDASLV LTETDYFNRLSFDSPLDVKFRADALGRTILFIGYSLSDMNIRLLLHRLWQTWRDSGYEKDRPPSFVFMPNRNPVEEAVLA RWGITALSEESESAQEALGTFLKHLLQMTCKSAGESEKLGRTQRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32878; Mature: 32747
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPMQQLAEAIKRRSAVLFVGAGVSMSVGLPSWDKLIRQMEQELGIDPETTKSSRYSYQ CCCHHHHHHHHHHHCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH TLAEYYRLKQGSLGPLRSWMDRNWSVSREKVKESLLHRLIVELDFPIIYTTNYDRNLEVA HHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEH FELYGRDFVKVANARDISRIADGVTQIIKYHGDFDEDASLVLTETDYFNRLSFDSPLDVK HEECCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCCCCEE FRADALGRTILFIGYSLSDMNIRLLLHRLWQTWRDSGYEKDRPPSFVFMPNRNPVEEAVL EEHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHH ARWGITALSEESESAQEALGTFLKHLLQMTCKSAGESEKLGRTQRP HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC >Mature Secondary Structure SDPMQQLAEAIKRRSAVLFVGAGVSMSVGLPSWDKLIRQMEQELGIDPETTKSSRYSYQ CCHHHHHHHHHHHCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH TLAEYYRLKQGSLGPLRSWMDRNWSVSREKVKESLLHRLIVELDFPIIYTTNYDRNLEVA HHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEH FELYGRDFVKVANARDISRIADGVTQIIKYHGDFDEDASLVLTETDYFNRLSFDSPLDVK HEECCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCCCCEE FRADALGRTILFIGYSLSDMNIRLLLHRLWQTWRDSGYEKDRPPSFVFMPNRNPVEEAVL EEHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHH ARWGITALSEESESAQEALGTFLKHLLQMTCKSAGESEKLGRTQRP HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA