Click here to switch to the map view.

The map label for this gene is ctaE [H]

Identifier: 110634817

GI number: 110634817

Start: 2655298

End: 2656005

Strand: Direct

Name: ctaE [H]

Synonym: Meso_2476

Alternate gene names: 110634817

Gene position: 2655298-2656005 (Clockwise)

Preceding gene: 110634816

Following gene: 110634818

Centisome position: 60.18

GC content: 61.44

Gene sequence:

>708_bases
ATGAGCGTCATCCTGGTCTTCATCCTCGTGGTGGCCGGATTCTCTTTCTGGTGGCTGCTCCAGCATCGGGTGCTGTCAAA
GCCGTGGCTTGAGCATGGCGTGCACGCCGCCTTGCCCGAAACGGACATCTCCAACATGCCGACGGCCAAGATCGGGCTCG
GCATCTTTCTTGCTGTGATTGGCGCGCTCTTCGCCCTTTTCGCCAGCGCATATTTCATGCGCATGGAGTATTCGGACTGG
CAGGCGCCACCGCTGCCGCGGATTTTGTGGATCAACACCGGCGTCTTGATCCTCGCCAGTATCGCGCTCCATTGCGCCGT
GCGCGCCGTCCGCGAACGACGCATGGGGATGACGCGCCTTGCGCTGGTGACGGGCGGGTTTGCAACCCTTGTCTTCCTGA
CCGGGCAGCTTACGGCCTGGCGGGACCTGTCGGCCGGCGGTCATTTTCTGGATTCCAATCCGGCCAACGGCTTCTTCTAT
CTCATCACCGGCGCGCACGGGCTGCATATCTTGGGCGGCCTGGTCGCGCTTGGGCGGACAACCGCCAAAACATGGGATGA
GACGTTGCCCACCGAGCGGCTGCGCCTGAGCGTGGAGCTTTGCGCGGCCTATTGGCATTTTCTTTTGCTTATCTGGCTCG
GACTTTTCGTCCTGCTGGCCGGTTGGGCTGGCGATCTCGTCGCATTGTGCAGACAGTTGCTCACATGA

Upstream 100 bases:

>100_bases
TGGTCTACCGCTGGGCCTATGACTATTCGGTGCCGGGAGCACCGCAGGATTTCATCCCGCAGAACGATCCTTGGCCGCAA
AAGGCTGTCGCGGGGACGGC

Downstream 100 bases:

>100_bases
AGGGGACAAGAAATGGCTGAGACCACGCTGAACGGCTTCGAAGCCAAGGAGGCGCACCAGAACGGCCTCAGGGGCGTGGC
CGCCGACTGGTCGTCCGACC

Product: cytochrome c oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III [H]

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSVILVFILVVAGFSFWWLLQHRVLSKPWLEHGVHAALPETDISNMPTAKIGLGIFLAVIGALFALFASAYFMRMEYSDW
QAPPLPRILWINTGVLILASIALHCAVRAVRERRMGMTRLALVTGGFATLVFLTGQLTAWRDLSAGGHFLDSNPANGFFY
LITGAHGLHILGGLVALGRTTAKTWDETLPTERLRLSVELCAAYWHFLLLIWLGLFVLLAGWAGDLVALCRQLLT

Sequences:

>Translated_235_residues
MSVILVFILVVAGFSFWWLLQHRVLSKPWLEHGVHAALPETDISNMPTAKIGLGIFLAVIGALFALFASAYFMRMEYSDW
QAPPLPRILWINTGVLILASIALHCAVRAVRERRMGMTRLALVTGGFATLVFLTGQLTAWRDLSAGGHFLDSNPANGFFY
LITGAHGLHILGGLVALGRTTAKTWDETLPTERLRLSVELCAAYWHFLLLIWLGLFVLLAGWAGDLVALCRQLLT
>Mature_234_residues
SVILVFILVVAGFSFWWLLQHRVLSKPWLEHGVHAALPETDISNMPTAKIGLGIFLAVIGALFALFASAYFMRMEYSDWQ
APPLPRILWINTGVLILASIALHCAVRAVRERRMGMTRLALVTGGFATLVFLTGQLTAWRDLSAGGHFLDSNPANGFFYL
ITGAHGLHILGGLVALGRTTAKTWDETLPTERLRLSVELCAAYWHFLLLIWLGLFVLLAGWAGDLVALCRQLLT

Specific function: Unknown

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 25970; Mature: 25839

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVILVFILVVAGFSFWWLLQHRVLSKPWLEHGVHAALPETDISNMPTAKIGLGIFLAVI
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GALFALFASAYFMRMEYSDWQAPPLPRILWINTGVLILASIALHCAVRAVRERRMGMTRL
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHH
ALVTGGFATLVFLTGQLTAWRDLSAGGHFLDSNPANGFFYLITGAHGLHILGGLVALGRT
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCH
TAKTWDETLPTERLRLSVELCAAYWHFLLLIWLGLFVLLAGWAGDLVALCRQLLT
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SVILVFILVVAGFSFWWLLQHRVLSKPWLEHGVHAALPETDISNMPTAKIGLGIFLAVI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GALFALFASAYFMRMEYSDWQAPPLPRILWINTGVLILASIALHCAVRAVRERRMGMTRL
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHH
ALVTGGFATLVFLTGQLTAWRDLSAGGHFLDSNPANGFFYLITGAHGLHILGGLVALGRT
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCH
TAKTWDETLPTERLRLSVELCAAYWHFLLLIWLGLFVLLAGWAGDLVALCRQLLT
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]