| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110634776
Identifier: 110634776
GI number: 110634776
Start: 2612058
End: 2612885
Strand: Reverse
Name: 110634776
Synonym: Meso_2435
Alternate gene names: NA
Gene position: 2612885-2612058 (Counterclockwise)
Preceding gene: 110634777
Following gene: 110634775
Centisome position: 59.22
GC content: 60.63
Gene sequence:
>828_bases ATGCTGCCCTGCCCAATGTTCTCTGCGCTTGCCGCGCTTTTCATGCTGGCCGGAGTTGCCGCCGCCCAGGACCAGTCCAT TGTCGTCGCTTCGACGACCTCGACGCAGGATTCCGGCCTCTTCGATCACATTCTTCCGCTATTCGAAGAGAAAACGGGCA TCGAGGTGAAGGTGATCGCCCAGGGAACCGGCCAGGCGCTCGATACGGGGCGGCGCGGCGATGCCGATGTGGTCTTCGTG CATGCGAGGGAACAGGAGGAGAAGTTCATCGAAGAAGGCTTCGGTGTGAGGCGCTTCGACGTGATGTATAACGATTTTGT CTTGATCGGTCCTAAGAGTGATCCTGCGGGCATCGGCGGTAGCGGCGATATCGCGGCTGCGCTTGTCGCAATCCAGAGCA GGCAAGCGCCGTTTATCTCGCGCGGCGACAAATCCGGAACCCATTCCGCGGAACTGAAGCTCTGGGAGGCGGCCAGCGTG GACATCGAAACCGCCAAGGGGCAGTGGTACAAGGAGATCGGGCAGGGAATGGGCGCGGCGCTCAATACGGCCTCTGCCAT GAATGCCTATGTGCTGTCCGACCGCGGCACCTGGCTGTCTTTCAAGAACCGCGGCGATCTCGACATTATGGTCGAGGGCG ACAGGCGACTGTTCAACCAGTATGGGGTCATGCTGGTCAACCCGGAGAAGCACCCGAGCGTCCAGGCCGAGGCCGGGCAG CGTTTCATCGAGTGGCTGATCTCGCCTGAGGGTCAGCAAGCGATCGGCGAATATAAGATTGGTGGCCAGCAGCTGTTCTT CCCGAACGCGGAGCAGGATCGTTCCTGA
Upstream 100 bases:
>100_bases GCGTGCCGACGCAGCGGACTTCCTGGACCGTCCCGCTACCCCGGAAGCCGCAGCCTTCGTGCAGGGCGAACTCGTTATCT GATCAACGATGGAGTTTGGA
Downstream 100 bases:
>100_bases GGACAGTTGCAAACCCCTTGGCGACTGTCCATCATCGGGAGATGATGACGACGCCTCCTCCAGCCGGCATTCTGACCAAT CTCAAAGCGGCGCTCGCCGC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLPCPMFSALAALFMLAGVAAAQDQSIVVASTTSTQDSGLFDHILPLFEEKTGIEVKVIAQGTGQALDTGRRGDADVVFV HAREQEEKFIEEGFGVRRFDVMYNDFVLIGPKSDPAGIGGSGDIAAALVAIQSRQAPFISRGDKSGTHSAELKLWEAASV DIETAKGQWYKEIGQGMGAALNTASAMNAYVLSDRGTWLSFKNRGDLDIMVEGDRRLFNQYGVMLVNPEKHPSVQAEAGQ RFIEWLISPEGQQAIGEYKIGGQQLFFPNAEQDRS
Sequences:
>Translated_275_residues MLPCPMFSALAALFMLAGVAAAQDQSIVVASTTSTQDSGLFDHILPLFEEKTGIEVKVIAQGTGQALDTGRRGDADVVFV HAREQEEKFIEEGFGVRRFDVMYNDFVLIGPKSDPAGIGGSGDIAAALVAIQSRQAPFISRGDKSGTHSAELKLWEAASV DIETAKGQWYKEIGQGMGAALNTASAMNAYVLSDRGTWLSFKNRGDLDIMVEGDRRLFNQYGVMLVNPEKHPSVQAEAGQ RFIEWLISPEGQQAIGEYKIGGQQLFFPNAEQDRS >Mature_275_residues MLPCPMFSALAALFMLAGVAAAQDQSIVVASTTSTQDSGLFDHILPLFEEKTGIEVKVIAQGTGQALDTGRRGDADVVFV HAREQEEKFIEEGFGVRRFDVMYNDFVLIGPKSDPAGIGGSGDIAAALVAIQSRQAPFISRGDKSGTHSAELKLWEAASV DIETAKGQWYKEIGQGMGAALNTASAMNAYVLSDRGTWLSFKNRGDLDIMVEGDRRLFNQYGVMLVNPEKHPSVQAEAGQ RFIEWLISPEGQQAIGEYKIGGQQLFFPNAEQDRS
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29822; Mature: 29822
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPCPMFSALAALFMLAGVAAAQDQSIVVASTTSTQDSGLFDHILPLFEEKTGIEVKVIA CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEE QGTGQALDTGRRGDADVVFVHAREQEEKFIEEGFGVRRFDVMYNDFVLIGPKSDPAGIGG CCCCCHHCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEECCEEEECCCCCCCCCCC SGDIAAALVAIQSRQAPFISRGDKSGTHSAELKLWEAASVDIETAKGQWYKEIGQGMGAA CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCHHHHHHHCCCCHH LNTASAMNAYVLSDRGTWLSFKNRGDLDIMVEGDRRLFNQYGVMLVNPEKHPSVQAEAGQ HHHHHHCEEEEEECCCCEEEECCCCCEEEEECCCHHHHHHCCEEEECCCCCCCCCHHHHH RFIEWLISPEGQQAIGEYKIGGQQLFFPNAEQDRS HHHHHHCCCCCHHHCCCEEECCEEEECCCCCCCCC >Mature Secondary Structure MLPCPMFSALAALFMLAGVAAAQDQSIVVASTTSTQDSGLFDHILPLFEEKTGIEVKVIA CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEE QGTGQALDTGRRGDADVVFVHAREQEEKFIEEGFGVRRFDVMYNDFVLIGPKSDPAGIGG CCCCCHHCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEECCEEEECCCCCCCCCCC SGDIAAALVAIQSRQAPFISRGDKSGTHSAELKLWEAASVDIETAKGQWYKEIGQGMGAA CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCHHHHHHHCCCCHH LNTASAMNAYVLSDRGTWLSFKNRGDLDIMVEGDRRLFNQYGVMLVNPEKHPSVQAEAGQ HHHHHHCEEEEEECCCCEEEECCCCCEEEEECCCHHHHHHCCEEEECCCCCCCCCHHHHH RFIEWLISPEGQQAIGEYKIGGQQLFFPNAEQDRS HHHHHHCCCCCHHHCCCEEECCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA