| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is gsiB [H]
Identifier: 110634750
GI number: 110634750
Start: 2566071
End: 2567588
Strand: Reverse
Name: gsiB [H]
Synonym: Meso_2408
Alternate gene names: 110634750
Gene position: 2567588-2566071 (Counterclockwise)
Preceding gene: 110634751
Following gene: 110634749
Centisome position: 58.19
GC content: 62.45
Gene sequence:
>1518_bases ATGACTTTTTCCTTCAAGCGCAGCCTGATGGCGGCCGCAGTGGGTGTCAGCGCGGTGACGCTGATCGCCGGCAGCGGCCT GGCACAGGACAACTCGACCGTCGTCGTTGCGCAGGCCGTGGACGCCTATACGATGGATCCCGCCAAGCATTCCAACTTCC CGACCGCGAACATCCTGTTTCAGATCTATGACGGCCTGATCGCGGAGGGAGAGAATGGCGAGCTCGTGCCGGCGCTGGCC GAATCCTGGAGCAACCCGGACGAACTGACCTGGCGCTTCAAGCTGCGGGAAGGCGTCACCTTCCATAATGGCGAGCCTTT CAATGCCGAGGCGGTGAAGCTCAGCTTCGAGCGCGCGCTCGATCCCGAGTTCAAGGCCCCTTATTTCTCGCGCATCTCGC ACATCAAGGCCGTGGAGGTCGTCGACGAGTATACGGTCGACTTCAAGACGGAGGAGCCGTTCCCGACGATGCTGCTGTCG CTGTACGAGGCGTCTTTCCCCGCCCTGATCGTGCCGCCGGCATATGCGAAGGAAAACGACGGCGCATCCATCGCCGCCCA TCCGGTCGGCACCGGCCCCTATAAGTTCGTCGAATGGCTCAAAGACGAGCGCGTCGTGCTCGAAGCCAATCCCGATTATT GGGGCGGCAAGCCGGCGATCGACAAGGTCGTCTTCCGTCCGATTGCCGAGACTCGCACCCGCATCGCCGAACTCACGAGC GGCGGTGCGGATATCATTGTCGACGTGCCGCCCGAAGACATCGCCGCGCTCGACGGCGGCGACACCAAGGTCAGCACCAT CGCCAGTGATTCCCTCTATTTCCTCGCCTTCGACACGACACGCGACACCCCGCTCAAGGACAAGCGCGTCCGGCAGGCGA TCAACTACGCCGTCGATGTCGACGCCATCCAGGCTGCGCTGCTGAACGGCATGGGCACGCGCATCGCGCTGACCTTGCCC ACGAACGCCTTCGCCTATGATCAGGCCTGGAAACCCTATCCCTATGACCCCGAAAAGGCCAAGCAGCTTCTGGCGGAAGC CGGGTATCCGGAGGGCTTTGAGATTCCCTTCATGTCGCGCAAGGGCCGCTACATGAAGGACAGCGAGATTATCGAGGCAA CAGCCGGTTTCCTCGCCCGCGTCGGCATCAAGGCCAACATCCAGTATCTGGAGCCGGGCGTGTGGGCGCAGGTTTCGGAA CGCAAGGGGCGCGAAGGCATCACCTTCCCCGGCTGGGCGGGCCGCGATCCACAGCTTGTCTGGGCGCCTCTGCTGATCAC CGGCCAGTACCAGAGCTATTTCAGCAATCCGGAGCTGGATGAACTGCTCAAGGCCGGCGCCTCGATCATCGATCCTGAGG AGCGCAAGGCGAACTACGCGAAGGCAGCCGAAATCATCAAGGAAGAGGCGCCGCACCTGCCGATGATCCAGCCGCCGCTC ATCTACGCCATTGATGCGAAACTGAACTGGACCCCGCGCAGCGACGGCATCATCGACCTGCGCAAGGCGCATTTCTAG
Upstream 100 bases:
>100_bases CGTGCTTCCGCGAAGCGCGACCAAAGGGGAGACGACCGAGGAGTGACAGAATCATCAACCGCAAGGGCCGGTACTGGCCA TTATAAAAGAGGGTAACGAA
Downstream 100 bases:
>100_bases GCTTTCGCACCGACATCCACCGGCCGGTATCGATCCGGCCGGTGAGCATCCGTACTCGTGTCTGCCATGGAGTGGAGCAG GCGTTGGCCGATTTCCTGAT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MTFSFKRSLMAAAVGVSAVTLIAGSGLAQDNSTVVVAQAVDAYTMDPAKHSNFPTANILFQIYDGLIAEGENGELVPALA ESWSNPDELTWRFKLREGVTFHNGEPFNAEAVKLSFERALDPEFKAPYFSRISHIKAVEVVDEYTVDFKTEEPFPTMLLS LYEASFPALIVPPAYAKENDGASIAAHPVGTGPYKFVEWLKDERVVLEANPDYWGGKPAIDKVVFRPIAETRTRIAELTS GGADIIVDVPPEDIAALDGGDTKVSTIASDSLYFLAFDTTRDTPLKDKRVRQAINYAVDVDAIQAALLNGMGTRIALTLP TNAFAYDQAWKPYPYDPEKAKQLLAEAGYPEGFEIPFMSRKGRYMKDSEIIEATAGFLARVGIKANIQYLEPGVWAQVSE RKGREGITFPGWAGRDPQLVWAPLLITGQYQSYFSNPELDELLKAGASIIDPEERKANYAKAAEIIKEEAPHLPMIQPPL IYAIDAKLNWTPRSDGIIDLRKAHF
Sequences:
>Translated_505_residues MTFSFKRSLMAAAVGVSAVTLIAGSGLAQDNSTVVVAQAVDAYTMDPAKHSNFPTANILFQIYDGLIAEGENGELVPALA ESWSNPDELTWRFKLREGVTFHNGEPFNAEAVKLSFERALDPEFKAPYFSRISHIKAVEVVDEYTVDFKTEEPFPTMLLS LYEASFPALIVPPAYAKENDGASIAAHPVGTGPYKFVEWLKDERVVLEANPDYWGGKPAIDKVVFRPIAETRTRIAELTS GGADIIVDVPPEDIAALDGGDTKVSTIASDSLYFLAFDTTRDTPLKDKRVRQAINYAVDVDAIQAALLNGMGTRIALTLP TNAFAYDQAWKPYPYDPEKAKQLLAEAGYPEGFEIPFMSRKGRYMKDSEIIEATAGFLARVGIKANIQYLEPGVWAQVSE RKGREGITFPGWAGRDPQLVWAPLLITGQYQSYFSNPELDELLKAGASIIDPEERKANYAKAAEIIKEEAPHLPMIQPPL IYAIDAKLNWTPRSDGIIDLRKAHF >Mature_504_residues TFSFKRSLMAAAVGVSAVTLIAGSGLAQDNSTVVVAQAVDAYTMDPAKHSNFPTANILFQIYDGLIAEGENGELVPALAE SWSNPDELTWRFKLREGVTFHNGEPFNAEAVKLSFERALDPEFKAPYFSRISHIKAVEVVDEYTVDFKTEEPFPTMLLSL YEASFPALIVPPAYAKENDGASIAAHPVGTGPYKFVEWLKDERVVLEANPDYWGGKPAIDKVVFRPIAETRTRIAELTSG GADIIVDVPPEDIAALDGGDTKVSTIASDSLYFLAFDTTRDTPLKDKRVRQAINYAVDVDAIQAALLNGMGTRIALTLPT NAFAYDQAWKPYPYDPEKAKQLLAEAGYPEGFEIPFMSRKGRYMKDSEIIEATAGFLARVGIKANIQYLEPGVWAQVSER KGREGITFPGWAGRDPQLVWAPLLITGQYQSYFSNPELDELLKAGASIIDPEERKANYAKAAEIIKEEAPHLPMIQPPLI YAIDAKLNWTPRSDGIIDLRKAHF
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=492, Percent_Identity=30.4878048780488, Blast_Score=218, Evalue=1e-57, Organism=Escherichia coli, GI1789966, Length=437, Percent_Identity=30.2059496567506, Blast_Score=154, Evalue=2e-38, Organism=Escherichia coli, GI1787762, Length=508, Percent_Identity=26.7716535433071, Blast_Score=145, Evalue=8e-36, Organism=Escherichia coli, GI1787551, Length=482, Percent_Identity=27.1784232365145, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1787495, Length=537, Percent_Identity=24.9534450651769, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1789887, Length=507, Percent_Identity=26.232741617357, Blast_Score=129, Evalue=6e-31, Organism=Escherichia coli, GI87081878, Length=507, Percent_Identity=24.8520710059172, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI1789397, Length=516, Percent_Identity=24.4186046511628, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786256, Length=244, Percent_Identity=27.8688524590164, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI87082063, Length=460, Percent_Identity=22.1739130434783, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 55689; Mature: 55557
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSFKRSLMAAAVGVSAVTLIAGSGLAQDNSTVVVAQAVDAYTMDPAKHSNFPTANILF CCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEECCCEECCCHHCCCCCHHHHHH QIYDGLIAEGENGELVPALAESWSNPDELTWRFKLREGVTFHNGEPFNAEAVKLSFERAL HHHHHHHCCCCCCCEEHHHHHCCCCCCCEEEEEEEECCCEECCCCCCCCCEEEEEHHHCC DPEFKAPYFSRISHIKAVEVVDEYTVDFKTEEPFPTMLLSLYEASFPALIVPPAYAKEND CCCCCCCHHHHHHHHHHEEEHHHHEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC GASIAAHPVGTGPYKFVEWLKDERVVLEANPDYWGGKPAIDKVVFRPIAETRTRIAELTS CCEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC GGADIIVDVPPEDIAALDGGDTKVSTIASDSLYFLAFDTTRDTPLKDKRVRQAINYAVDV CCCEEEEECCCHHHEECCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHCCH DAIQAALLNGMGTRIALTLPTNAFAYDQAWKPYPYDPEKAKQLLAEAGYPEGFEIPFMSR HHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC KGRYMKDSEIIEATAGFLARVGIKANIQYLEPGVWAQVSERKGREGITFPGWAGRDPQLV CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCCEE WAPLLITGQYQSYFSNPELDELLKAGASIIDPEERKANYAKAAEIIKEEAPHLPMIQPPL EEEEEEECCHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE IYAIDAKLNWTPRSDGIIDLRKAHF EEEEECEEECCCCCCCEEEHHCCCC >Mature Secondary Structure TFSFKRSLMAAAVGVSAVTLIAGSGLAQDNSTVVVAQAVDAYTMDPAKHSNFPTANILF CCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEECCCEECCCHHCCCCCHHHHHH QIYDGLIAEGENGELVPALAESWSNPDELTWRFKLREGVTFHNGEPFNAEAVKLSFERAL HHHHHHHCCCCCCCEEHHHHHCCCCCCCEEEEEEEECCCEECCCCCCCCCEEEEEHHHCC DPEFKAPYFSRISHIKAVEVVDEYTVDFKTEEPFPTMLLSLYEASFPALIVPPAYAKEND CCCCCCCHHHHHHHHHHEEEHHHHEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC GASIAAHPVGTGPYKFVEWLKDERVVLEANPDYWGGKPAIDKVVFRPIAETRTRIAELTS CCEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC GGADIIVDVPPEDIAALDGGDTKVSTIASDSLYFLAFDTTRDTPLKDKRVRQAINYAVDV CCCEEEEECCCHHHEECCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHCCH DAIQAALLNGMGTRIALTLPTNAFAYDQAWKPYPYDPEKAKQLLAEAGYPEGFEIPFMSR HHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC KGRYMKDSEIIEATAGFLARVGIKANIQYLEPGVWAQVSERKGREGITFPGWAGRDPQLV CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCCEE WAPLLITGQYQSYFSNPELDELLKAGASIIDPEERKANYAKAAEIIKEEAPHLPMIQPPL EEEEEEECCHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE IYAIDAKLNWTPRSDGIIDLRKAHF EEEEECEEECCCCCCCEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA