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The map label for this gene is ydiK [C]

Identifier: 110634577

GI number: 110634577

Start: 2379278

End: 2380456

Strand: Reverse

Name: ydiK [C]

Synonym: Meso_2229

Alternate gene names: 110634577

Gene position: 2380456-2379278 (Counterclockwise)

Preceding gene: 110634578

Following gene: 110634575

Centisome position: 53.95

GC content: 60.39

Gene sequence:

>1179_bases
ATGCGCCAGCAGAATACCAAGGCGAAAAAGAACGGAACGCCAACGGCTGTGACCGTAATCGAGCGTATGGATTCGAGCGC
GGCCAGGATGCTGGTCCTAGTGGCCGCCGCCGTCCTGGGCGTCTACCTCTCCTATCGGCTGGCACTACCATTCCTCCCGG
CACTTGTCTGGGCTGTCGTGCTCGGCGTCCTCATTGCGCCGGTCCAGCCGAAACTCGAAATGCACCTTGGCGCAAATGTT
GCCGCATTCGTCTCGGCGTCGGTGGCTGCCTTGATTGTGATATTGCTTCTGCTCTTTATCGTGCAGCAGCTTGTCAGGGA
GGCTGCCGATGGCGCCATGAACATCGAAAGCGCGCTGCGGTCGTCCGACTGGCAGAGCATCATCAATGGTGTTCCGATAT
TTTCTACGCTCGCCGCATGGCTCGGCGAGCGCCTCGACCTTGCCGGAATGATGGGGCGGATTGCCCAGTGGCTCACCGCA
CAAAGTGCAACGCTGCTGCGCGGATCCATCAATCAGGCAATCACGCTTCTGCTCGTCTTCTACATGCTCTTCTATTTCCT
GCGCGATCGGAAGCTTGCCGTACGCGCCCTGGGGGAATTCTCGCCGCTGAACGGTGATGAGACGGCACACATCGTTGCCG
GTTTCGTGGATACCGTGCACGCCACGATGTTCGGGACCCTTATCGTCGCCGCCGTTCAGGGCACTCTGGGCGGTCTGATG
TTCTGGTTGCTTGGCTTGCCGGCTCCCGCGTTCTGGGGGCTGGTCATGGGTCTCCTCGCGATCGTGCCCGTGCTGGGTGC
GTTCGTGGTCTGGGTCCCCGCAGCCATCTTTCTTGCCGTGGAAGGCGAGTGGGTTCGTGCTCTAGTTTTGGTTATATGGG
GCGGCGTGATAATCGCCACGATCGATAATCTGCTCTACCCGATATTTGTCGGCAATCGGCTGAAGCTGCACACTGTTCTG
GCTTTCATTGGCGCTGTGGGCGGCATCATCCTGTTCGGCGCTTCCGGGCTTGTTCTCGGGCCGGCGACGATTTCCATTAC
GTTGGCTCTGATCGCGGTCCTGAAGGGCCGCTTCCAGGGTGAGCCTTTGTCGACGACAGTCGGGTCGGAGGTGCCTGATC
CAAGCGCCGCAACGCGGCTACCGCAGCTTGAGATTGGCGATCGCGACGCCGGGCTCTGA

Upstream 100 bases:

>100_bases
AGGCTCGAATTCTGAACCTGCGGCAATGCACGACGGCGATAGTCCTCTCCGGGGACGGCCAGCACTGGCAATTCCATCGG
GTTTCGGGGGCGAGAGCGAT

Downstream 100 bases:

>100_bases
AGGGTGGGGCGCCAGCTTGAAGCCGAACTCCCTGCCCATCGCGAGCATTTTCGTGTTCTCACTGAGGATTAAGCCTTCGA
TGACGCTCAGGCCGTCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRQQNTKAKKNGTPTAVTVIERMDSSAARMLVLVAAAVLGVYLSYRLALPFLPALVWAVVLGVLIAPVQPKLEMHLGANV
AAFVSASVAALIVILLLLFIVQQLVREAADGAMNIESALRSSDWQSIINGVPIFSTLAAWLGERLDLAGMMGRIAQWLTA
QSATLLRGSINQAITLLLVFYMLFYFLRDRKLAVRALGEFSPLNGDETAHIVAGFVDTVHATMFGTLIVAAVQGTLGGLM
FWLLGLPAPAFWGLVMGLLAIVPVLGAFVVWVPAAIFLAVEGEWVRALVLVIWGGVIIATIDNLLYPIFVGNRLKLHTVL
AFIGAVGGIILFGASGLVLGPATISITLALIAVLKGRFQGEPLSTTVGSEVPDPSAATRLPQLEIGDRDAGL

Sequences:

>Translated_392_residues
MRQQNTKAKKNGTPTAVTVIERMDSSAARMLVLVAAAVLGVYLSYRLALPFLPALVWAVVLGVLIAPVQPKLEMHLGANV
AAFVSASVAALIVILLLLFIVQQLVREAADGAMNIESALRSSDWQSIINGVPIFSTLAAWLGERLDLAGMMGRIAQWLTA
QSATLLRGSINQAITLLLVFYMLFYFLRDRKLAVRALGEFSPLNGDETAHIVAGFVDTVHATMFGTLIVAAVQGTLGGLM
FWLLGLPAPAFWGLVMGLLAIVPVLGAFVVWVPAAIFLAVEGEWVRALVLVIWGGVIIATIDNLLYPIFVGNRLKLHTVL
AFIGAVGGIILFGASGLVLGPATISITLALIAVLKGRFQGEPLSTTVGSEVPDPSAATRLPQLEIGDRDAGL
>Mature_392_residues
MRQQNTKAKKNGTPTAVTVIERMDSSAARMLVLVAAAVLGVYLSYRLALPFLPALVWAVVLGVLIAPVQPKLEMHLGANV
AAFVSASVAALIVILLLLFIVQQLVREAADGAMNIESALRSSDWQSIINGVPIFSTLAAWLGERLDLAGMMGRIAQWLTA
QSATLLRGSINQAITLLLVFYMLFYFLRDRKLAVRALGEFSPLNGDETAHIVAGFVDTVHATMFGTLIVAAVQGTLGGLM
FWLLGLPAPAFWGLVMGLLAIVPVLGAFVVWVPAAIFLAVEGEWVRALVLVIWGGVIIATIDNLLYPIFVGNRLKLHTVL
AFIGAVGGIILFGASGLVLGPATISITLALIAVLKGRFQGEPLSTTVGSEVPDPSAATRLPQLEIGDRDAGL

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=327, Percent_Identity=27.5229357798165, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41592; Mature: 41592

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQQNTKAKKNGTPTAVTVIERMDSSAARMLVLVAAAVLGVYLSYRLALPFLPALVWAVV
CCCCCCCHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVLIAPVQPKLEMHLGANVAAFVSASVAALIVILLLLFIVQQLVREAADGAMNIESALR
HHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SSDWQSIINGVPIFSTLAAWLGERLDLAGMMGRIAQWLTAQSATLLRGSINQAITLLLVF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMLFYFLRDRKLAVRALGEFSPLNGDETAHIVAGFVDTVHATMFGTLIVAAVQGTLGGLM
HHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWLLGLPAPAFWGLVMGLLAIVPVLGAFVVWVPAAIFLAVEGEWVRALVLVIWGGVIIAT
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IDNLLYPIFVGNRLKLHTVLAFIGAVGGIILFGASGLVLGPATISITLALIAVLKGRFQG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHCCCC
EPLSTTVGSEVPDPSAATRLPQLEIGDRDAGL
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQQNTKAKKNGTPTAVTVIERMDSSAARMLVLVAAAVLGVYLSYRLALPFLPALVWAVV
CCCCCCCHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVLIAPVQPKLEMHLGANVAAFVSASVAALIVILLLLFIVQQLVREAADGAMNIESALR
HHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SSDWQSIINGVPIFSTLAAWLGERLDLAGMMGRIAQWLTAQSATLLRGSINQAITLLLVF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMLFYFLRDRKLAVRALGEFSPLNGDETAHIVAGFVDTVHATMFGTLIVAAVQGTLGGLM
HHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWLLGLPAPAFWGLVMGLLAIVPVLGAFVVWVPAAIFLAVEGEWVRALVLVIWGGVIIAT
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IDNLLYPIFVGNRLKLHTVLAFIGAVGGIILFGASGLVLGPATISITLALIAVLKGRFQG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHCCCC
EPLSTTVGSEVPDPSAATRLPQLEIGDRDAGL
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]