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The map label for this gene is ycaK [C]

Identifier: 110634575

GI number: 110634575

Start: 2375878

End: 2376462

Strand: Reverse

Name: ycaK [C]

Synonym: Meso_2227

Alternate gene names: 110634575

Gene position: 2376462-2375878 (Counterclockwise)

Preceding gene: 110634577

Following gene: 110634574

Centisome position: 53.86

GC content: 64.27

Gene sequence:

>585_bases
ATGGCCAACCGTATCGTCATCATTCAGGGCCACCCCGATCCGGATCCGGGCCGCTACTGCCGCGCCTTGGCGGATGCCTA
TGCCGAGGGTGCGGAAGCTGCAGGCCACCAGGTGACCAGGATCGACCTTGCACAGATCGAATTTCCGCTGCTTCGCACGC
AGGAGGACTTCCTGCACGGCTCGGTCCCGCGGGAGCTCGAGCTCGCCAAGGGAGCGATCCTCAGGGCCGAGCACCTGGTC
TTCGTCTTTCCGCTGTGGCTGGGAACCATGCCGGCCTTGCTCAAGGGCTTCCTCGAACAGATAATGCGGCCGGGTGTCGC
CTTCGCCTACGGGAAGAGAGGCTTTCCGGAAACCCTCCTCAAGGGCCGCTCGGCCCGCATCATCGTCACCATGGGCATGC
CGGCCTTCTTCTATCGCTGGTGGTTTTTGGGCCACGGGCTGCGCGGGATGCGGCGCAACATCCTCAAATTCGTGGGGCTC
GGCCCGGTAAAGGAAACCCTGTTCGGCATGATCGAGGCCGCCGGCGATCAAAAGCGGCGCAAATGGCTCGATCAGATACG
CCGGCTCGGGGAGCGGGCAGCCTGA

Upstream 100 bases:

>100_bases
GAGGAGCTCCGACCGATTTGTTCCCAGTCTTTGATGCCAGTCAAAGGGGTGGCCGGGCAAGGAGCGTATCGTTTCGATAC
TCAAAAAACCAGGAAGCATC

Downstream 100 bases:

>100_bases
ACCCCATACCTGGTGTTCTTCGCGGCTCGAAACGGCGGTACACGGTATAAGCCGTCTGAAGAGGGGAGGGCTTGCGTGCA
GCCTGATGTCGGAGCGATTC

Product: NAD(P)H dehydrogenase (quinone)

Products: NA

Alternate protein names: NAD(P)H Dehydrogenase Quinone Family; Oxidoreductase; NADPH-Quinone Reductase; Quinone Family NAD(P)H Dehydrogenase; Flavodoxin-Like Fold Subfamily; NADPH-Quinone Reductase YabF Family; NADPH-Dependent FMN Reductase; Flavodoxin-Like Fold Family Protein; Flavodoxin-Like Fold Protein; Quinone Family Oxidoreductase/NAD(P)H Dehydrogenase; Flavodoxin Containing Oxidoreductase; NAD(P)H Quinone Oxidoreductase; NAD(P)H Oxidoreductase

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MANRIVIIQGHPDPDPGRYCRALADAYAEGAEAAGHQVTRIDLAQIEFPLLRTQEDFLHGSVPRELELAKGAILRAEHLV
FVFPLWLGTMPALLKGFLEQIMRPGVAFAYGKRGFPETLLKGRSARIIVTMGMPAFFYRWWFLGHGLRGMRRNILKFVGL
GPVKETLFGMIEAAGDQKRRKWLDQIRRLGERAA

Sequences:

>Translated_194_residues
MANRIVIIQGHPDPDPGRYCRALADAYAEGAEAAGHQVTRIDLAQIEFPLLRTQEDFLHGSVPRELELAKGAILRAEHLV
FVFPLWLGTMPALLKGFLEQIMRPGVAFAYGKRGFPETLLKGRSARIIVTMGMPAFFYRWWFLGHGLRGMRRNILKFVGL
GPVKETLFGMIEAAGDQKRRKWLDQIRRLGERAA
>Mature_193_residues
ANRIVIIQGHPDPDPGRYCRALADAYAEGAEAAGHQVTRIDLAQIEFPLLRTQEDFLHGSVPRELELAKGAILRAEHLVF
VFPLWLGTMPALLKGFLEQIMRPGVAFAYGKRGFPETLLKGRSARIIVTMGMPAFFYRWWFLGHGLRGMRRNILKFVGLG
PVKETLFGMIEAAGDQKRRKWLDQIRRLGERAA

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.- [C]

Molecular weight: Translated: 21911; Mature: 21780

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRIVIIQGHPDPDPGRYCRALADAYAEGAEAAGHQVTRIDLAQIEFPLLRTQEDFLHG
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCHHHHHCC
SVPRELELAKGAILRAEHLVFVFPLWLGTMPALLKGFLEQIMRPGVAFAYGKRGFPETLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCHHHHH
KGRSARIIVTMGMPAFFYRWWFLGHGLRGMRRNILKFVGLGPVKETLFGMIEAAGDQKRR
CCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH
KWLDQIRRLGERAA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ANRIVIIQGHPDPDPGRYCRALADAYAEGAEAAGHQVTRIDLAQIEFPLLRTQEDFLHG
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCHHHHHCC
SVPRELELAKGAILRAEHLVFVFPLWLGTMPALLKGFLEQIMRPGVAFAYGKRGFPETLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCHHHHH
KGRSARIIVTMGMPAFFYRWWFLGHGLRGMRRNILKFVGLGPVKETLFGMIEAAGDQKRR
CCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH
KWLDQIRRLGERAA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA