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The map label for this gene is 110634568

Identifier: 110634568

GI number: 110634568

Start: 2367084

End: 2368709

Strand: Reverse

Name: 110634568

Synonym: Meso_2219

Alternate gene names: NA

Gene position: 2368709-2367084 (Counterclockwise)

Preceding gene: 110634569

Following gene: 110634567

Centisome position: 53.68

GC content: 57.13

Gene sequence:

>1626_bases
ATGAAACGCACAGCAATCTACGCCCGTTTCTCCACCGAACTGCAACAAGATCGTTCAATTGAAGATCAGATCGAATTGTG
TCGCAGCCACGCAGACCGGAACGGCCTTTCTGTGGTGGCGGTGTACGACGATCGCGCCCGCTCGGGAGCTTCCGTTTATG
GTCGCGACGGATTGATACATCTCTTGGAGGCTGCGCGGGATCGGAAGTTTGATGTGATCCTGGTCGAGGCGTTCGACCGC
CTCTCCCGTGATCAGGAAGATCTGGCCGGCATCTGGAAGAGGCTCAGCTTTCTCGGCATCGAACTCCAGGCAGTGCATGA
AGGTACGGCCGATCACATCCAGATTGGGGTTCGAGGGCTACTCGGTTCCCTTTATCTGACGGATCTGGCTCACAAAGTAC
GTCGTGGAATGCAGGGTGTTGTAAGAGACGGACGGCATGCGGGTGGAAGAGCGTACGGATATCGTCCGGTTCCCGGCAAA
CCGGGAGAACTCGAGATCGTTGAGGGCGAGGCCGAGATAGTCAGAAGGATATTTTCGGAATACGTTGGCGGGAAGACGCC
ACGGGGGATCGCCTTTGATTTAAACGCGGAGGGCATTTCTCCGCCTCGCGGCACACGGTGGAGTGCTTCGACCATCAACG
GCAACAAGACCAGACATCACGGCATTATTCTGAACGAGCTGTACGCAGGCAAGGTCGTTTGGAACCGCATTCGCATGTTG
AAGGACCCAGATACGGGCCGTCGTATTTCGCGGCCTAATCCTCCCGAAGAATGGAAACGCGCTGAAGCACCCCACCTCGC
CATTGTCAGCGAGGAACTCTTTGCGGCCGCTCAAACCAGAAAAGAGGCACGAAGCCACACAGCACCTGAGCGACAGCGCA
AGGGCAAATACCTTCTGTCCGGACTGCTCAAGTGCAGCTGCTGTGGTGGCGGCCTATCGGTCAAAGATCGAGATCATGGC
CGTGTCCGAGTCCATTGCACCACTAGGCGCGAGTCGGGTTCCTGCACTAACCACAAAATCTTCTACCTGGATGAGATCGA
CAAGGCAGTCTTGGCTGGCCTTCAGCAGCATCTAAAGGCGCCGCACCTGATTAAGGAATTTGCCCGAACATACCAGCAAG
AACGCGAGCGACTTGCCAGCGAGAAGCGTACGCGCTGTAGCAAGCTGGAAAGTCAATTGGCAAAGGCACAGCGCGCAATC
GATCGACTTTGGTCAGACTACGAGGCCGAACGGATACCTATGGACATCGCAGGGCCGAAGCTCAAAGAGCTGCATGCGCA
GAAGACTGAGCTCGAAGCGGAGCTTGCTGAAACGCCGGCCGAACAGCAGAAGGTCATCGGTCTACATCCGGCGGCGCTGC
AACAGTACGAACAGCATGTAGCCGAGCTGCAGGCTCTATTTGGCGAAGGCGTTTCTTCAGATTATGCGGAGGCGGCTGAC
AAGATACGGAACCTGATCGCGCGGGTAACCGTCATCCCCCAAGACAGGGGCTTCAAGCTGGAACTGCAGGGGAGGCTGGC
GCTGCTGCTGGGCGCGCCAAAGGTCTATCCGAATATGCGGATAGCGGCGTCGGGGGGAACGGTGGTAGCGGAGGAGGGAC
TCGAACCCCCGACACAAGGATTATGA

Upstream 100 bases:

>100_bases
TTGTAGAAATCGTTCGTGCCCTTGCACGCGCGGCTGCTCGGAGAGATCATCGTGAGGCCCGCGAGGCCGAACTGAAGATC
GCTACCAAGGCAGCCCGTCG

Downstream 100 bases:

>100_bases
TTCCTCTGCTCTAACCAACTGAGCTACTCCGCCCCAAGGTTCAGGGCGTTGCGCGCCCTGAACTCGAAGTCGGGCGGATA
TAAGGTTGCATGTTGAATGG

Product: recombinase

Products: NA

Alternate protein names: Resolvase Domain Protein; Resolvase Domain-Containing Protein; Resolvase Domain; Site-Specific Recombinase; DNA Recombinase; Site-Specific DNA Recombinase; DNA Integration/Recombination Protein; Site-Specific Recombinases; Resolvase; Resolvase N Terminal Domain Family; Site-Specific Recombinase For Integration And Excision; Recombinase Family; Cassette Chromosome Recombinase B; Resolvase Domain Protein PinR Type; Site-Specific Recombinase/DNA Invertase; LOW QUALITY PROTEIN Resolvase Domain Protein; Site-Specific Recombinase And Resolvase Superfamily Protein

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MKRTAIYARFSTELQQDRSIEDQIELCRSHADRNGLSVVAVYDDRARSGASVYGRDGLIHLLEAARDRKFDVILVEAFDR
LSRDQEDLAGIWKRLSFLGIELQAVHEGTADHIQIGVRGLLGSLYLTDLAHKVRRGMQGVVRDGRHAGGRAYGYRPVPGK
PGELEIVEGEAEIVRRIFSEYVGGKTPRGIAFDLNAEGISPPRGTRWSASTINGNKTRHHGIILNELYAGKVVWNRIRML
KDPDTGRRISRPNPPEEWKRAEAPHLAIVSEELFAAAQTRKEARSHTAPERQRKGKYLLSGLLKCSCCGGGLSVKDRDHG
RVRVHCTTRRESGSCTNHKIFYLDEIDKAVLAGLQQHLKAPHLIKEFARTYQQERERLASEKRTRCSKLESQLAKAQRAI
DRLWSDYEAERIPMDIAGPKLKELHAQKTELEAELAETPAEQQKVIGLHPAALQQYEQHVAELQALFGEGVSSDYAEAAD
KIRNLIARVTVIPQDRGFKLELQGRLALLLGAPKVYPNMRIAASGGTVVAEEGLEPPTQGL

Sequences:

>Translated_541_residues
MKRTAIYARFSTELQQDRSIEDQIELCRSHADRNGLSVVAVYDDRARSGASVYGRDGLIHLLEAARDRKFDVILVEAFDR
LSRDQEDLAGIWKRLSFLGIELQAVHEGTADHIQIGVRGLLGSLYLTDLAHKVRRGMQGVVRDGRHAGGRAYGYRPVPGK
PGELEIVEGEAEIVRRIFSEYVGGKTPRGIAFDLNAEGISPPRGTRWSASTINGNKTRHHGIILNELYAGKVVWNRIRML
KDPDTGRRISRPNPPEEWKRAEAPHLAIVSEELFAAAQTRKEARSHTAPERQRKGKYLLSGLLKCSCCGGGLSVKDRDHG
RVRVHCTTRRESGSCTNHKIFYLDEIDKAVLAGLQQHLKAPHLIKEFARTYQQERERLASEKRTRCSKLESQLAKAQRAI
DRLWSDYEAERIPMDIAGPKLKELHAQKTELEAELAETPAEQQKVIGLHPAALQQYEQHVAELQALFGEGVSSDYAEAAD
KIRNLIARVTVIPQDRGFKLELQGRLALLLGAPKVYPNMRIAASGGTVVAEEGLEPPTQGL
>Mature_541_residues
MKRTAIYARFSTELQQDRSIEDQIELCRSHADRNGLSVVAVYDDRARSGASVYGRDGLIHLLEAARDRKFDVILVEAFDR
LSRDQEDLAGIWKRLSFLGIELQAVHEGTADHIQIGVRGLLGSLYLTDLAHKVRRGMQGVVRDGRHAGGRAYGYRPVPGK
PGELEIVEGEAEIVRRIFSEYVGGKTPRGIAFDLNAEGISPPRGTRWSASTINGNKTRHHGIILNELYAGKVVWNRIRML
KDPDTGRRISRPNPPEEWKRAEAPHLAIVSEELFAAAQTRKEARSHTAPERQRKGKYLLSGLLKCSCCGGGLSVKDRDHG
RVRVHCTTRRESGSCTNHKIFYLDEIDKAVLAGLQQHLKAPHLIKEFARTYQQERERLASEKRTRCSKLESQLAKAQRAI
DRLWSDYEAERIPMDIAGPKLKELHAQKTELEAELAETPAEQQKVIGLHPAALQQYEQHVAELQALFGEGVSSDYAEAAD
KIRNLIARVTVIPQDRGFKLELQGRLALLLGAPKVYPNMRIAASGGTVVAEEGLEPPTQGL

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60400; Mature: 60400

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTAIYARFSTELQQDRSIEDQIELCRSHADRNGLSVVAVYDDRARSGASVYGRDGLIH
CCCCEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHH
LLEAARDRKFDVILVEAFDRLSRDQEDLAGIWKRLSFLGIELQAVHEGTADHIQIGVRGL
HHHHHCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHH
LGSLYLTDLAHKVRRGMQGVVRDGRHAGGRAYGYRPVPGKPGELEIVEGEAEIVRRIFSE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH
YVGGKTPRGIAFDLNAEGISPPRGTRWSASTINGNKTRHHGIILNELYAGKVVWNRIRML
HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCEEEHHHHHHHHHHHHHHHH
KDPDTGRRISRPNPPEEWKRAEAPHLAIVSEELFAAAQTRKEARSHTAPERQRKGKYLLS
CCCCCCCCCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
GLLKCSCCGGGLSVKDRDHGRVRVHCTTRRESGSCTNHKIFYLDEIDKAVLAGLQQHLKA
HHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCC
PHLIKEFARTYQQERERLASEKRTRCSKLESQLAKAQRAIDRLWSDYEAERIPMDIAGPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCH
LKELHAQKTELEAELAETPAEQQKVIGLHPAALQQYEQHVAELQALFGEGVSSDYAEAAD
HHHHHHHHHHHHHHHHHCCHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KIRNLIARVTVIPQDRGFKLELQGRLALLLGAPKVYPNMRIAASGGTVVAEEGLEPPTQG
HHHHHHHHHEEEECCCCCEEEECCCEEEEEECCCCCCCCEEEECCCEEEECCCCCCCCCC
L
C
>Mature Secondary Structure
MKRTAIYARFSTELQQDRSIEDQIELCRSHADRNGLSVVAVYDDRARSGASVYGRDGLIH
CCCCEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHH
LLEAARDRKFDVILVEAFDRLSRDQEDLAGIWKRLSFLGIELQAVHEGTADHIQIGVRGL
HHHHHCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHH
LGSLYLTDLAHKVRRGMQGVVRDGRHAGGRAYGYRPVPGKPGELEIVEGEAEIVRRIFSE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH
YVGGKTPRGIAFDLNAEGISPPRGTRWSASTINGNKTRHHGIILNELYAGKVVWNRIRML
HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCEEEHHHHHHHHHHHHHHHH
KDPDTGRRISRPNPPEEWKRAEAPHLAIVSEELFAAAQTRKEARSHTAPERQRKGKYLLS
CCCCCCCCCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
GLLKCSCCGGGLSVKDRDHGRVRVHCTTRRESGSCTNHKIFYLDEIDKAVLAGLQQHLKA
HHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCC
PHLIKEFARTYQQERERLASEKRTRCSKLESQLAKAQRAIDRLWSDYEAERIPMDIAGPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCH
LKELHAQKTELEAELAETPAEQQKVIGLHPAALQQYEQHVAELQALFGEGVSSDYAEAAD
HHHHHHHHHHHHHHHHHCCHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KIRNLIARVTVIPQDRGFKLELQGRLALLLGAPKVYPNMRIAASGGTVVAEEGLEPPTQG
HHHHHHHHHEEEECCCCCEEEECCCEEEEEECCCCCCCCEEEECCCEEEECCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA