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The map label for this gene is yisS [H]

Identifier: 110634567

GI number: 110634567

Start: 2365877

End: 2366869

Strand: Reverse

Name: yisS [H]

Synonym: Meso_2218

Alternate gene names: 110634567

Gene position: 2366869-2365877 (Counterclockwise)

Preceding gene: 110634568

Following gene: 110634565

Centisome position: 53.64

GC content: 62.13

Gene sequence:

>993_bases
ATGAAGCTGCGTGTCGCCGTTCTTGGGTGTGGGTATTGGGGGGCGAACCACATCCGCACACTGAAGTCGCTCGGCGCTCT
CTACGCCGTTTCCGATGCCAATCGCGCAAGGGCGGAAGGGTTCGCCAGCGAACAGGAATGCCTCGCGATCGATCCTGACG
ATCTTTTCGAGAACCGTGAGGTGGACGCGGTCGTCATGGCCTTGCCGCCGCAGTTTCACGCCGAAAATGCCATCAAGGCC
GTGCAGGCGGGAAAGCATGTGCTGGTGGAGAAGCCGATTGCGCTCACAGTTGCCGACGCGGAGCGGGCCGTCCGGACCGC
GCGCGATGCAGGCCGCGTCTATATGGTCGGCCATGTGCTGCGGTTCCATCCTGCCTTCGAAAAACTGAAGGCCCTCATCG
ATGCCGGTGAATTGGGGGATGTCCGTTATATCCATTCGCACCGGCTCGGTCTCGGCAAGTTTCACACGGAGAACGACGCG
CTTTGGGACCTGGCGCCGCACGACCTCTCCATGATCCTCGCCATTACCGGCGCGCCGCCTGTCGAGGTGCGAGGGGAGGG
GGCGGCCCTTCTGGATCATCTGAGCGATTTCGCCCATCTCCATATGCGCTTTGAAAGCGGGCTTAGGAGCCATCTCTTCG
CCTCACGCCTTAATCCCTATCGCGAGCGGCGGCTTACCGTCGTCGGCAACAAGGCCATGGCTGTGTTCGACGATGTCGAG
CCGTGGAGCCGGAAGCTTGCGATCTACCGCCATGCCATATGGCAGGACAGCGGTCAGTGGGCTTTCACCACCAATGAGCC
CACCTATGTGCCCGTGGAGGAAGGCATGCCGCTCACGCGCGAGCTCGAGCACTTTATGGATTGCGTCGAGAACAACAGGG
AGCCTCGCACCACGGGCGAGGAGGCCATCGAAGTGCTCCGTATCCTCACCGCCGGTACCATCGTGCACAGCCGCGACACG
GGCGATTTCCTGGACACACAGGCCGGGCAGTAG

Upstream 100 bases:

>100_bases
GTCGGCGTCTTTTCCATTTCCTTCGTCACATCGCCGCGTGGGGTTGAGTTGCGTCGCCAGCACCGATATGTGTCCGGCGA
GCAAATCGTGTGAAGATTAG

Downstream 100 bases:

>100_bases
GACATCCTTTTTCCTCCCGGTCTGAAGAGCCGATGGCCGCGCGCTTCATCCTTACCAAGCCCGGCTGTTTCCATCTGGCC
ATTACAGGAGAAGCTGGGAA

Product: oxidoreductase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKLRVAVLGCGYWGANHIRTLKSLGALYAVSDANRARAEGFASEQECLAIDPDDLFENREVDAVVMALPPQFHAENAIKA
VQAGKHVLVEKPIALTVADAERAVRTARDAGRVYMVGHVLRFHPAFEKLKALIDAGELGDVRYIHSHRLGLGKFHTENDA
LWDLAPHDLSMILAITGAPPVEVRGEGAALLDHLSDFAHLHMRFESGLRSHLFASRLNPYRERRLTVVGNKAMAVFDDVE
PWSRKLAIYRHAIWQDSGQWAFTTNEPTYVPVEEGMPLTRELEHFMDCVENNREPRTTGEEAIEVLRILTAGTIVHSRDT
GDFLDTQAGQ

Sequences:

>Translated_330_residues
MKLRVAVLGCGYWGANHIRTLKSLGALYAVSDANRARAEGFASEQECLAIDPDDLFENREVDAVVMALPPQFHAENAIKA
VQAGKHVLVEKPIALTVADAERAVRTARDAGRVYMVGHVLRFHPAFEKLKALIDAGELGDVRYIHSHRLGLGKFHTENDA
LWDLAPHDLSMILAITGAPPVEVRGEGAALLDHLSDFAHLHMRFESGLRSHLFASRLNPYRERRLTVVGNKAMAVFDDVE
PWSRKLAIYRHAIWQDSGQWAFTTNEPTYVPVEEGMPLTRELEHFMDCVENNREPRTTGEEAIEVLRILTAGTIVHSRDT
GDFLDTQAGQ
>Mature_330_residues
MKLRVAVLGCGYWGANHIRTLKSLGALYAVSDANRARAEGFASEQECLAIDPDDLFENREVDAVVMALPPQFHAENAIKA
VQAGKHVLVEKPIALTVADAERAVRTARDAGRVYMVGHVLRFHPAFEKLKALIDAGELGDVRYIHSHRLGLGKFHTENDA
LWDLAPHDLSMILAITGAPPVEVRGEGAALLDHLSDFAHLHMRFESGLRSHLFASRLNPYRERRLTVVGNKAMAVFDDVE
PWSRKLAIYRHAIWQDSGQWAFTTNEPTYVPVEEGMPLTRELEHFMDCVENNREPRTTGEEAIEVLRILTAGTIVHSRDT
GDFLDTQAGQ

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=149, Percent_Identity=31.5436241610738, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI87081947, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787574, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36786; Mature: 36786

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRVAVLGCGYWGANHIRTLKSLGALYAVSDANRARAEGFASEQECLAIDPDDLFENRE
CEEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCCCEEEECHHHHHCCCC
VDAVVMALPPQFHAENAIKAVQAGKHVLVEKPIALTVADAERAVRTARDAGRVYMVGHVL
CCEEEEECCCCCCHHHHHHHHHCCCEEEEECCEEEEEHHHHHHHHHHHHCCCEEEEHHHH
RFHPAFEKLKALIDAGELGDVRYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGAPP
HHCHHHHHHHHHHCCCCCCCEEEEHHCCCCCCCEECCCCCEEEECCCCEEEEEEECCCCC
VEVRGEGAALLDHLSDFAHLHMRFESGLRSHLFASRLNPYRERRLTVVGNKAMAVFDDVE
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEECCCEEEEECCCC
PWSRKLAIYRHAIWQDSGQWAFTTNEPTYVPVEEGMPLTRELEHFMDCVENNREPRTTGE
HHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHH
EAIEVLRILTAGTIVHSRDTGDFLDTQAGQ
HHHHHHHHHHHHHEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKLRVAVLGCGYWGANHIRTLKSLGALYAVSDANRARAEGFASEQECLAIDPDDLFENRE
CEEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCCCEEEECHHHHHCCCC
VDAVVMALPPQFHAENAIKAVQAGKHVLVEKPIALTVADAERAVRTARDAGRVYMVGHVL
CCEEEEECCCCCCHHHHHHHHHCCCEEEEECCEEEEEHHHHHHHHHHHHCCCEEEEHHHH
RFHPAFEKLKALIDAGELGDVRYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGAPP
HHCHHHHHHHHHHCCCCCCCEEEEHHCCCCCCCEECCCCCEEEECCCCEEEEEEECCCCC
VEVRGEGAALLDHLSDFAHLHMRFESGLRSHLFASRLNPYRERRLTVVGNKAMAVFDDVE
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEECCCEEEEECCCC
PWSRKLAIYRHAIWQDSGQWAFTTNEPTYVPVEEGMPLTRELEHFMDCVENNREPRTTGE
HHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHH
EAIEVLRILTAGTIVHSRDTGDFLDTQAGQ
HHHHHHHHHHHHHEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]