| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110634535
Identifier: 110634535
GI number: 110634535
Start: 2336945
End: 2337442
Strand: Reverse
Name: 110634535
Synonym: Meso_2186
Alternate gene names: NA
Gene position: 2337442-2336945 (Counterclockwise)
Preceding gene: 110634537
Following gene: 110634533
Centisome position: 52.97
GC content: 60.84
Gene sequence:
>498_bases ATGCCTTCACCCGCCCATGCCGAAACGCGAACTGCCGAGCAGATGCGGTTTCGCGTAAAACTCTTTCACCTCTGGCACTT GTTCCGGCGTCCGCTGACGCTCGGTGTTCGCGGCGTGGTCTTCGATCAGCAGCGGCGTGAGGTGTTCCTGGTGAAGCACA CCTATGTGGGCGGCTGGCATCTGCCCGGAGGCGGGGTCGAACCGGGCGAGACCATGCTTTCCTGCCTTGCCCGAGAACTT CAGGAGGAAGGCAATATCGTGCTCACCGGAGCGCCGCAGCTCAAGTCTATCCATTTTAACGGCAAGGCGAGCCGTCGTGA TCACGTGGCGATCTATCTGATTACGCAATTCGCGCAGACCGCTCCGCGCAAGCCCGATCTGGAAATCGCGGATGCCCGGT TCTTTCCGCTCGATGCGTTGCCTGAGGGAACGACGGAGGGCACCCGCCGCCGCCTCGGCGAGATTTTCAGCGATTTGGAA GTTTCGGCAGATTGGTAG
Upstream 100 bases:
>100_bases CGGGAAGGGGGCCCAAATGGATATCGGAAAAATGTGCCAATCGAAACATGATGTTTCTGTAAAACACCCCGTCGCGGCTT ACCAGCCCTAAGAGAATTCG
Downstream 100 bases:
>100_bases CGGTTCCCTAGTCTCAGAGGGGGAGGGGTATGTTCAAGCAGCTTTGGCAAACCTTTCCCGGTCATGCGGCACGGCAAAGT CAAGCTCGGGGCCCAGCGGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; MutT/Nudix Family Protein; Hydrolase Protein; Hydrolase Protein MutT/Nudix Family; MutT/NUDIX Family Protein; NUDIX Family Hydrolase; MutT/NUDIX Family Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWHLPGGGVEPGETMLSCLAREL QEEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQTAPRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLE VSADW
Sequences:
>Translated_165_residues MPSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWHLPGGGVEPGETMLSCLAREL QEEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQTAPRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLE VSADW >Mature_164_residues PSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWHLPGGGVEPGETMLSCLARELQ EEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQTAPRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLEV SADW
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18716; Mature: 18584
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCEEEEEEEEEECCEE LPGGGVEPGETMLSCLARELQEEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQT CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEHHHHH APRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLEVSADW CCCCCCCEECCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWH CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCEEEEEEEEEECCEE LPGGGVEPGETMLSCLARELQEEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQT CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEHHHHH APRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLEVSADW CCCCCCCEECCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA