Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

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The map label for this gene is 110634470

Identifier: 110634470

GI number: 110634470

Start: 2277049

End: 2277870

Strand: Direct

Name: 110634470

Synonym: Meso_2121

Alternate gene names: NA

Gene position: 2277049-2277870 (Clockwise)

Preceding gene: 110634469

Following gene: 110634471

Centisome position: 51.61

GC content: 63.02

Gene sequence:

>822_bases
GTGTACGAGTACGAGTGGCGGCGTCAGTGGCCTTTCCGCCTGCCCCGGGTTGCAAGAAGCGCACTCGTGCTCATCGCTTT
TGCAGCCGCTTCGGCTTGCTCGGTTGATAGTGTTCTGCGACCCGACGTGGATGTCGGCGTCTCGACCGGCGCCATAAGCG
GCGGTGGACTGCAAAACCTCGTCCCCTCCAATCCGATGATGATGAGCTATCCCGTGCCGGCGCAGCCCGAGCCGCCAGCG
ATGGCAAGCCCGCCGGGCGAAGCGATGACCTTCATGCCCGCCGAGGAAGTGGCGTGCCGTCAGGAACTGCAGCGGCTAGG
GGTGAGCTATCGCGATCTTCCGGCAATCGATGAGGGCGGGAGCTGCAAAATCGAGCATCCCGTTGCGGTCAGCGGTTTCT
CGGGCGGGGTCGCCTTGAAGCCATCCGCCACACTTACCTGCCAGATGGCACTGACAGTTGCGCGCTGGACGAAGAACGAG
CTCGCGCCTGCCGCCCGCAGACGCTATCTCTCCGGCATCGGCACCATTCACCAGGGTTCAAGCTATTCTTGCCGGCGCAT
TCGCGGCACCTCCGTGGCTTCAGAGCATTCCAAGGGCAATGCGATCGACATCATGAGCGTTACGCTCAAGAACGGCCGTG
AGATCGACGTCCGTCGCCCGGGCTTCTTTGCGTTCCGCCAGAGGGGCCTGCTCAACACCGTGCGCGCCGAGGGCTGCGAC
TATTTTACGACCGTGCTTGGGCCGGGCTATGATGCCGACCACCGCGACCACTTTCATTTTGACATAAAGGCTCGGCGGAA
CGGCTATCGCGCCTGCAGGTAG

Upstream 100 bases:

>100_bases
GCCGCATTTTCGCCACAAGATTCACGCTGGCGCTGAGTATTCGTTTACCATTCCCCACTAGCTTCACTTCGACCGGCGAG
CCGAAGCGGAGATGCGTAGC

Downstream 100 bases:

>100_bases
CAGGACCATCCGCAATGTCCTATCTTGGCGCGGGTAGCTTCTGCTGAGCCATCACGCTCCCAACCAGAGTCAATCATGCT
CTTTGTTGAAATCGCCATTC

Product: extensin-like

Products: NA

Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Inner Membrane Protein; Extensin Domain Protein; Conserved Protein; Extensin Domain-Containing Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MYEYEWRRQWPFRLPRVARSALVLIAFAAASACSVDSVLRPDVDVGVSTGAISGGGLQNLVPSNPMMMSYPVPAQPEPPA
MASPPGEAMTFMPAEEVACRQELQRLGVSYRDLPAIDEGGSCKIEHPVAVSGFSGGVALKPSATLTCQMALTVARWTKNE
LAPAARRRYLSGIGTIHQGSSYSCRRIRGTSVASEHSKGNAIDIMSVTLKNGREIDVRRPGFFAFRQRGLLNTVRAEGCD
YFTTVLGPGYDADHRDHFHFDIKARRNGYRACR

Sequences:

>Translated_273_residues
MYEYEWRRQWPFRLPRVARSALVLIAFAAASACSVDSVLRPDVDVGVSTGAISGGGLQNLVPSNPMMMSYPVPAQPEPPA
MASPPGEAMTFMPAEEVACRQELQRLGVSYRDLPAIDEGGSCKIEHPVAVSGFSGGVALKPSATLTCQMALTVARWTKNE
LAPAARRRYLSGIGTIHQGSSYSCRRIRGTSVASEHSKGNAIDIMSVTLKNGREIDVRRPGFFAFRQRGLLNTVRAEGCD
YFTTVLGPGYDADHRDHFHFDIKARRNGYRACR
>Mature_273_residues
MYEYEWRRQWPFRLPRVARSALVLIAFAAASACSVDSVLRPDVDVGVSTGAISGGGLQNLVPSNPMMMSYPVPAQPEPPA
MASPPGEAMTFMPAEEVACRQELQRLGVSYRDLPAIDEGGSCKIEHPVAVSGFSGGVALKPSATLTCQMALTVARWTKNE
LAPAARRRYLSGIGTIHQGSSYSCRRIRGTSVASEHSKGNAIDIMSVTLKNGREIDVRRPGFFAFRQRGLLNTVRAEGCD
YFTTVLGPGYDADHRDHFHFDIKARRNGYRACR

Specific function: Unknown

COG id: COG3921

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29852; Mature: 29852

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEYEWRRQWPFRLPRVARSALVLIAFAAASACSVDSVLRPDVDVGVSTGAISGGGLQNL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCC
VPSNPMMMSYPVPAQPEPPAMASPPGEAMTFMPAEEVACRQELQRLGVSYRDLPAIDEGG
CCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
SCKIEHPVAVSGFSGGVALKPSATLTCQMALTVARWTKNELAPAARRRYLSGIGTIHQGS
CEEECCCEEEECCCCCEEECCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
SYSCRRIRGTSVASEHSKGNAIDIMSVTLKNGREIDVRRPGFFAFRQRGLLNTVRAEGCD
CCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHCCHHHHHHHCCCC
YFTTVLGPGYDADHRDHFHFDIKARRNGYRACR
EEEHHCCCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MYEYEWRRQWPFRLPRVARSALVLIAFAAASACSVDSVLRPDVDVGVSTGAISGGGLQNL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCC
VPSNPMMMSYPVPAQPEPPAMASPPGEAMTFMPAEEVACRQELQRLGVSYRDLPAIDEGG
CCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
SCKIEHPVAVSGFSGGVALKPSATLTCQMALTVARWTKNELAPAARRRYLSGIGTIHQGS
CEEECCCEEEECCCCCEEECCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
SYSCRRIRGTSVASEHSKGNAIDIMSVTLKNGREIDVRRPGFFAFRQRGLLNTVRAEGCD
CCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHCCHHHHHHHCCCC
YFTTVLGPGYDADHRDHFHFDIKARRNGYRACR
EEEHHCCCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA