Click here to switch to the map view.

The map label for this gene is 110634447

Identifier: 110634447

GI number: 110634447

Start: 2252615

End: 2253043

Strand: Reverse

Name: 110634447

Synonym: Meso_2098

Alternate gene names: NA

Gene position: 2253043-2252615 (Counterclockwise)

Preceding gene: 110634449

Following gene: 110634440

Centisome position: 51.06

GC content: 67.37

Gene sequence:

>429_bases
ATGATGTGCGGCGAAAACGAACGGGAGGACGGAATGGAGATCAAACGAAGCGGATCGCAGCCCTCCGGCACGGGCCCAGC
GGATTATTTCACCGGATCGGTGCGGCTCGACCCGCTCTTCACCGCGCCGGACCCCGCGCGGGCGGTGGGGACGCTTGTCA
CCTTCGAGCCGGGCGCGCGCACGGCCTGGCACACGCATCCGCTCGGCCAGACATTGATCGTGATGTCCGGCCTCGGGCGT
GCACAGCGCGAAGGCGGGCCGATCGAGGAAATCCAGCCGGGAGACGTGGTCTGGTTTCCGCCGGGCGAGAAGCACTGGCA
CGGCGCCAGCCCCACCACTGGAATGGCGCATATCGCCATTCAGGAGAGGCAGGACGGCGCGACAGCCGAGTGGCTGGAGC
ACGTCACCGACGAGCAATATGGCGGGTGA

Upstream 100 bases:

>100_bases
GTCTGGCCGATTGGCAAAGGCGCTCCTTATTCGGGTCATGCGAGGCCTTCGCGACGTTCGAGAACCAGTCGCCATTCTCG
CTTTAGGATAGCGGCCTGTT

Downstream 100 bases:

>100_bases
GGGATTCTCTGTCGTAAGGATCCCCTCTCTTGCGACAAGAAATCGCTATCTCCCCCGCGCGAGGGAGATATCGCCGGCAT
TGCCTCACCGCTGCTCTTCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Family Protein; 4-Carboxymuconolactone Decarboxylase; Cupin Region; Cupin Domain Protein; Double-Stranded Beta-Helix-Like Protein; Carboxymuconolactone Decarboxylase Family Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Double-Stranded Beta-Helix Protein; Secreted Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MMCGENEREDGMEIKRSGSQPSGTGPADYFTGSVRLDPLFTAPDPARAVGTLVTFEPGARTAWHTHPLGQTLIVMSGLGR
AQREGGPIEEIQPGDVVWFPPGEKHWHGASPTTGMAHIAIQERQDGATAEWLEHVTDEQYGG

Sequences:

>Translated_142_residues
MMCGENEREDGMEIKRSGSQPSGTGPADYFTGSVRLDPLFTAPDPARAVGTLVTFEPGARTAWHTHPLGQTLIVMSGLGR
AQREGGPIEEIQPGDVVWFPPGEKHWHGASPTTGMAHIAIQERQDGATAEWLEHVTDEQYGG
>Mature_142_residues
MMCGENEREDGMEIKRSGSQPSGTGPADYFTGSVRLDPLFTAPDPARAVGTLVTFEPGARTAWHTHPLGQTLIVMSGLGR
AQREGGPIEEIQPGDVVWFPPGEKHWHGASPTTGMAHIAIQERQDGATAEWLEHVTDEQYGG

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15321; Mature: 15321

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMCGENEREDGMEIKRSGSQPSGTGPADYFTGSVRLDPLFTAPDPARAVGTLVTFEPGAR
CCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCEEECEEECCCCHHHHHEEEEEECCCCC
TAWHTHPLGQTLIVMSGLGRAQREGGPIEEIQPGDVVWFPPGEKHWHGASPTTGMAHIAI
CCEECCCCCCEEEEECCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEE
QERQDGATAEWLEHVTDEQYGG
ECCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMCGENEREDGMEIKRSGSQPSGTGPADYFTGSVRLDPLFTAPDPARAVGTLVTFEPGAR
CCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCEEECEEECCCCHHHHHEEEEEECCCCC
TAWHTHPLGQTLIVMSGLGRAQREGGPIEEIQPGDVVWFPPGEKHWHGASPTTGMAHIAI
CCEECCCCCCEEEEECCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEE
QERQDGATAEWLEHVTDEQYGG
ECCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA