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The map label for this gene is yjhC [C]

Identifier: 110634307

GI number: 110634307

Start: 2098306

End: 2099331

Strand: Direct

Name: yjhC [C]

Synonym: Meso_1957

Alternate gene names: 110634307

Gene position: 2098306-2099331 (Clockwise)

Preceding gene: 110634306

Following gene: 110634308

Centisome position: 47.55

GC content: 66.28

Gene sequence:

>1026_bases
ATGATGCGCGTGGGGATCGTGGGAACCGCCTTTGGCGAATCCCGCTGCCGGATGCTGGCCGCGGTGCCGCAGGCGCAGTT
GATCGCCGTCTGCGGCCGCGACGAGGCGCGGACCAGGGCGGTCGCCGAGCGGCATAACTGTGTGCCAGTCCTGGATTATC
GCGCGCTGATCGCCCGGCCGGATATCGATGTGGTGGGGGTCTATACTTCCACCGACATGCACGGCGAAATCGCCATTGCG
GCGCTGCGGGCCGGCAAGCATGTGATCGTCAGCAAGCCCACCGCCGTTGACGTGCCGGAAGGCGAGGCGATGCTGGCGGC
GGCGCGCGAGGCCGGGGTTCAACTGGTGGTGGAGTTCGACACGCGCTATGTGCCGGGCGCCTATCGCATCTACAAGGCGA
TTGCCGAAGGCCGCCTCGGGCCGCTGATCCAGGGCGATTATGTCAACAAGTGCCAGCGTTCGCAGGCCTATTACGACGAG
GGGTCGGGTTGGCGCGGCATCGCCGCGATGGGCGGCGGCTGCCTGCAGAACCAGGGCGTACACCCGATCGATCATCTGCT
ATGGTATCAGGGACAGGTTGAGGGCGTGTTCGCCTTTTCGGCGACAGTTGGGCACGATATTCCGGCCGAGGACGCAGCCA
GCGCTGTGATCCGTTTCACCAACGGCTCGTTCGCCACGCTGACCGTGACCACCACCTATCGCAGCAATCTGCCCGACGGG
CGCTATGGCGGCGGCACGCTGAAGCGCGCGCAGGTGCATGGCTCTCTTGGCAGCGCCACCATCGAGGGCGACACTGTCGC
CGATTGGGTGGTGCCAGAGGCGGTGGTGGCAGCGCCGATCCCCGATCATCCGCCACTCAACGTGTTTCAGGACCTGGCCT
GGACACTGGCCGACTCGGCGCGTCCCGCCCATACGCTGGTGGCCGGTGAAAGGGCGCTCGACGGCGTCTATATCACCGCC
GCGTTGCGGCAGTCGGCTGCCACCGGCGCTTATGTTGCCATCGACCAGTTGCGAGGCGTGCAATGA

Upstream 100 bases:

>100_bases
ATGGACGCCGAGGGCTTCGTGCATGTTCCCAAGGGGCCGGGCATGGGCTGGGATATCGACTGGGACTTCATCGCCGGCAA
CGAGATCAAGTGAGCCGGTC

Downstream 100 bases:

>100_bases
TCCCTGTTCTGCACCCGGCCGAATTGACCCGCCGATCTGCGCGCCTCGGTCATCGCAGCGCCGCCCCTGGTGCAGATGTC
GAAGCGGGCCGGATCACGCT

Product: oxidoreductase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MMRVGIVGTAFGESRCRMLAAVPQAQLIAVCGRDEARTRAVAERHNCVPVLDYRALIARPDIDVVGVYTSTDMHGEIAIA
ALRAGKHVIVSKPTAVDVPEGEAMLAAAREAGVQLVVEFDTRYVPGAYRIYKAIAEGRLGPLIQGDYVNKCQRSQAYYDE
GSGWRGIAAMGGGCLQNQGVHPIDHLLWYQGQVEGVFAFSATVGHDIPAEDAASAVIRFTNGSFATLTVTTTYRSNLPDG
RYGGGTLKRAQVHGSLGSATIEGDTVADWVVPEAVVAAPIPDHPPLNVFQDLAWTLADSARPAHTLVAGERALDGVYITA
ALRQSAATGAYVAIDQLRGVQ

Sequences:

>Translated_341_residues
MMRVGIVGTAFGESRCRMLAAVPQAQLIAVCGRDEARTRAVAERHNCVPVLDYRALIARPDIDVVGVYTSTDMHGEIAIA
ALRAGKHVIVSKPTAVDVPEGEAMLAAAREAGVQLVVEFDTRYVPGAYRIYKAIAEGRLGPLIQGDYVNKCQRSQAYYDE
GSGWRGIAAMGGGCLQNQGVHPIDHLLWYQGQVEGVFAFSATVGHDIPAEDAASAVIRFTNGSFATLTVTTTYRSNLPDG
RYGGGTLKRAQVHGSLGSATIEGDTVADWVVPEAVVAAPIPDHPPLNVFQDLAWTLADSARPAHTLVAGERALDGVYITA
ALRQSAATGAYVAIDQLRGVQ
>Mature_341_residues
MMRVGIVGTAFGESRCRMLAAVPQAQLIAVCGRDEARTRAVAERHNCVPVLDYRALIARPDIDVVGVYTSTDMHGEIAIA
ALRAGKHVIVSKPTAVDVPEGEAMLAAAREAGVQLVVEFDTRYVPGAYRIYKAIAEGRLGPLIQGDYVNKCQRSQAYYDE
GSGWRGIAAMGGGCLQNQGVHPIDHLLWYQGQVEGVFAFSATVGHDIPAEDAASAVIRFTNGSFATLTVTTTYRSNLPDG
RYGGGTLKRAQVHGSLGSATIEGDTVADWVVPEAVVAAPIPDHPPLNVFQDLAWTLADSARPAHTLVAGERALDGVYITA
ALRQSAATGAYVAIDQLRGVQ

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=248, Percent_Identity=24.5967741935484, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081947, Length=186, Percent_Identity=27.4193548387097, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36224; Mature: 36224

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRVGIVGTAFGESRCRMLAAVPQAQLIAVCGRDEARTRAVAERHNCVPVLDYRALIARP
CEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECHHHHHCCC
DIDVVGVYTSTDMHGEIAIAALRAGKHVIVSKPTAVDVPEGEAMLAAAREAGVQLVVEFD
CCCEEEEEECCCCCCCEEEEEEECCCEEEEECCCEEECCCCCHHHHHHHHCCEEEEEEEC
TRYVPGAYRIYKAIAEGRLGPLIQGDYVNKCQRSQAYYDEGSGWRGIAAMGGGCLQNQGV
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEHHHCCCHHCCCCC
HPIDHLLWYQGQVEGVFAFSATVGHDIPAEDAASAVIRFTNGSFATLTVTTTYRSNLPDG
CHHHHHHEECCCCCEEEEEEEECCCCCCCHHHCCEEEEEECCCEEEEEEEEEECCCCCCC
RYGGGTLKRAQVHGSLGSATIEGDTVADWVVPEAVVAAPIPDHPPLNVFQDLAWTLADSA
CCCCCCEEEEEECCCCCCEEECCCCCCHHHCCCHHEECCCCCCCCHHHHHHHHHHHHCCC
RPAHTLVAGERALDGVYITAALRQSAATGAYVAIDQLRGVQ
CCCHHEEECCHHHCCEEEEEEHHHCCCCCCEEEEHHHCCCC
>Mature Secondary Structure
MMRVGIVGTAFGESRCRMLAAVPQAQLIAVCGRDEARTRAVAERHNCVPVLDYRALIARP
CEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECHHHHHCCC
DIDVVGVYTSTDMHGEIAIAALRAGKHVIVSKPTAVDVPEGEAMLAAAREAGVQLVVEFD
CCCEEEEEECCCCCCCEEEEEEECCCEEEEECCCEEECCCCCHHHHHHHHCCEEEEEEEC
TRYVPGAYRIYKAIAEGRLGPLIQGDYVNKCQRSQAYYDEGSGWRGIAAMGGGCLQNQGV
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEHHHCCCHHCCCCC
HPIDHLLWYQGQVEGVFAFSATVGHDIPAEDAASAVIRFTNGSFATLTVTTTYRSNLPDG
CHHHHHHEECCCCCEEEEEEEECCCCCCCHHHCCEEEEEECCCEEEEEEEEEECCCCCCC
RYGGGTLKRAQVHGSLGSATIEGDTVADWVVPEAVVAAPIPDHPPLNVFQDLAWTLADSA
CCCCCCEEEEEECCCCCCEEECCCCCCHHHCCCHHEECCCCCCCCHHHHHHHHHHHHCCC
RPAHTLVAGERALDGVYITAALRQSAATGAYVAIDQLRGVQ
CCCHHEEECCHHHCCEEEEEEHHHCCCCCCEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]