Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110634295

Identifier: 110634295

GI number: 110634295

Start: 2085297

End: 2086160

Strand: Reverse

Name: 110634295

Synonym: Meso_1945

Alternate gene names: NA

Gene position: 2086160-2085297 (Counterclockwise)

Preceding gene: 110634296

Following gene: 110634288

Centisome position: 47.28

GC content: 64.47

Gene sequence:

>864_bases
ATGCTGCACCGCAAACTGACCGGCACTCCCCCACATACAGCGCTGCCCAAGGGCGCGGTCGACACTCAGGTACACCTCTA
CTTGCCTGGCTACCCGGCGGCCCCTGGCGGCAGCCCTATTCCCGAGGGCACTCCAGGCCCGGCCGAATATCGCCAGGTTA
TGAGTTGGCTCGGCATAGAGCGCGTCATCGTCACCCAGGGCAACGCGCATCAGCGCGACAATGCCAATCTCTTGGCGAGC
CTTGCCGCGATGGGCGATATTGCCCGCGGCGTCGCCGTCATCGCCGGCGATACGAGCGACGCTGAATTGCAACGGCTCCA
GGCTGCGGGCGTTGTCGGCGCCCGGATAATGGACTTGCCGGGCGGCGCCATTGGCCTTGCCGATCTCGAAGCCGTCGATG
CCCGCGCAGCAGCTTTCGACTGGTGCCTGGCAGTGCAGTTCAACGGCTCCAATATCCTCGAGCACAAGACCCGTCTCGCT
GCGATTAGCAGCCGCTGGATTTTCGATCACCACGGCAAGTTCTTCGCCGGCGTGACGCCCAAGGGGCCGGAGATCGATGC
CGTTAAGCGATTGATCGATGGCGGCCGCTGCTGGTTCAAATTCGCCGCCTGCTACGAATCCTCGCGCACCGGCGGTCCGC
TTTACGAAGACATCGCGGCAGTCGCCCGTGAGATCGCCGGCTATGCCCCCGAGCGTATCGTCTGGGGCACCAACTGGCCG
CACAACCAGATGCAGACCACCGCATCCTATCCCGATGACGGCGCCTTGCTCGACCGCGTGCTGGGATGGCTGCCGGACGA
TCGTGCCCGCCAATTGGCCTTGGTCGACAATCCGGAGCAGCTGTTCCGCCTCCCTTCCGCATGA

Upstream 100 bases:

>100_bases
TCGACCATGTTGCCGGCGTGGTGATTATTCCCGACGGCCCGGGCCTTGGCATCGAAATCGAGCGTGACGCGCTTGAACGC
TATCGTCCAAAGGACCTTTG

Downstream 100 bases:

>100_bases
TGTACTACCGGGTGCGCTTGAACGAGCCCGGCTTCGGCTGAACGCCAGCAGATTGGGGTTAGTCACTTCGGCAGGCATGG
AAGCGTATAAGGCTCCGCCT

Product: amidohydrolase 2

Products: NA

Alternate protein names: Amidohydrolase; 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Dicarboxylic Acid Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Amidohydrolase Family Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase Family; Exported Protein

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MLHRKLTGTPPHTALPKGAVDTQVHLYLPGYPAAPGGSPIPEGTPGPAEYRQVMSWLGIERVIVTQGNAHQRDNANLLAS
LAAMGDIARGVAVIAGDTSDAELQRLQAAGVVGARIMDLPGGAIGLADLEAVDARAAAFDWCLAVQFNGSNILEHKTRLA
AISSRWIFDHHGKFFAGVTPKGPEIDAVKRLIDGGRCWFKFAACYESSRTGGPLYEDIAAVAREIAGYAPERIVWGTNWP
HNQMQTTASYPDDGALLDRVLGWLPDDRARQLALVDNPEQLFRLPSA

Sequences:

>Translated_287_residues
MLHRKLTGTPPHTALPKGAVDTQVHLYLPGYPAAPGGSPIPEGTPGPAEYRQVMSWLGIERVIVTQGNAHQRDNANLLAS
LAAMGDIARGVAVIAGDTSDAELQRLQAAGVVGARIMDLPGGAIGLADLEAVDARAAAFDWCLAVQFNGSNILEHKTRLA
AISSRWIFDHHGKFFAGVTPKGPEIDAVKRLIDGGRCWFKFAACYESSRTGGPLYEDIAAVAREIAGYAPERIVWGTNWP
HNQMQTTASYPDDGALLDRVLGWLPDDRARQLALVDNPEQLFRLPSA
>Mature_287_residues
MLHRKLTGTPPHTALPKGAVDTQVHLYLPGYPAAPGGSPIPEGTPGPAEYRQVMSWLGIERVIVTQGNAHQRDNANLLAS
LAAMGDIARGVAVIAGDTSDAELQRLQAAGVVGARIMDLPGGAIGLADLEAVDARAAAFDWCLAVQFNGSNILEHKTRLA
AISSRWIFDHHGKFFAGVTPKGPEIDAVKRLIDGGRCWFKFAACYESSRTGGPLYEDIAAVAREIAGYAPERIVWGTNWP
HNQMQTTASYPDDGALLDRVLGWLPDDRARQLALVDNPEQLFRLPSA

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30848; Mature: 30848

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHRKLTGTPPHTALPKGAVDTQVHLYLPGYPAAPGGSPIPEGTPGPAEYRQVMSWLGIE
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCE
RVIVTQGNAHQRDNANLLASLAAMGDIARGVAVIAGDTSDAELQRLQAAGVVGARIMDLP
EEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHEEEECC
GGAIGLADLEAVDARAAAFDWCLAVQFNGSNILEHKTRLAAISSRWIFDHHGKFFAGVTP
CCEECHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHCCEEECCCCEEECCCC
KGPEIDAVKRLIDGGRCWFKFAACYESSRTGGPLYEDIAAVAREIAGYAPERIVWGTNWP
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
HNQMQTTASYPDDGALLDRVLGWLPDDRARQLALVDNPEQLFRLPSA
CHHHEECCCCCCCHHHHHHHHCCCCCCHHCEEEEECCHHHHHCCCCC
>Mature Secondary Structure
MLHRKLTGTPPHTALPKGAVDTQVHLYLPGYPAAPGGSPIPEGTPGPAEYRQVMSWLGIE
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCE
RVIVTQGNAHQRDNANLLASLAAMGDIARGVAVIAGDTSDAELQRLQAAGVVGARIMDLP
EEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHEEEECC
GGAIGLADLEAVDARAAAFDWCLAVQFNGSNILEHKTRLAAISSRWIFDHHGKFFAGVTP
CCEECHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHCCEEECCCCEEECCCC
KGPEIDAVKRLIDGGRCWFKFAACYESSRTGGPLYEDIAAVAREIAGYAPERIVWGTNWP
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
HNQMQTTASYPDDGALLDRVLGWLPDDRARQLALVDNPEQLFRLPSA
CHHHEECCCCCCCHHHHHHHHCCCCCCHHCEEEEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA