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The map label for this gene is ooxA [H]

Identifier: 110634281

GI number: 110634281

Start: 2067094

End: 2068527

Strand: Reverse

Name: ooxA [H]

Synonym: Meso_1931

Alternate gene names: 110634281

Gene position: 2068527-2067094 (Counterclockwise)

Preceding gene: 110634282

Following gene: 110634280

Centisome position: 46.88

GC content: 58.09

Gene sequence:

>1434_bases
GTGATCAGCTTGCAGTCCTTAATGAATCTCGACGATCGTTATGAGCTGATCGTGATCGGTGCCGGGCCAGCCGGAATGGC
TGCGGCGATAGAGGCGACGCGGAATGGCGTCAAGACGCTGGTTTTAGACGAGAATGGCGCGATTGGAGGGCAGATTTACC
GCTCGATCACCACCGCGACACCGAAGCGCCTAGCAGTTCTCGGAAAGGACTATGCAGGGGGCGCAGAGCTCGCCCGGACC
TTTACTGAATCGGGTGCTGCTTACCTGGCAAAAGCTACCGTCTGGCGGCTGACTGCCGACCGCGAACTTGGAGTTTCGCA
TGATGGCATGGCCAAGCTGATAACGGGAGAGCGGGTCCTGGTGGCCACTGGTGCCCTGGAGCGGCCATTTCCAATTGCTG
GATGGACATTGCCCGGCGTCATGACCGCCGGCGCTGCGCAGATACTGCTCAAGGCGAGTGGCGCCGTTATGGGGCCAAAG
ATGGTTCTGGCAGGAAGTGGTCCGCTTCTCTGGTTGCTAGCCAGCCAGTATCTTGCTGCCGATGTTCCCCTTCTCGCTAT
CCTTGACACGACTCCCCGGAAAAATGTCCTTAGAGCCATTCCGCATCTGCCTGGTTTCATGGCCTCGCCTTATTTCAGAA
AGGGCTTAGGCTTGGTCACTAAGGTCCGGCGGGCCGTACGAGTCTACAAGAATGTCGATAAACTGAGAGCAGAAGGGAGC
GAACGGGTCGAGCGCGTGCGGTTTAGCGCTTCCGGGAAAGAGCACTCTTTGGAACTCGATCACCTCCTGCTGCATCATGG
AGTCGTGCCCGAGATGAACCTTCTTCGTTCCGTTGGCTGCGAAATGGCGTGGGACGAGGAGCAGATATGCTGGCATCCGA
TCGCCAGTGCTGGCGGCGAGACATCTATTCCCGGGATCTATGTCGCTGGCGACGGACGGGCGATCTACGGCGCTGAACTG
GCGCGATTTGGCGGAAGACGTGCCGCTCTGGAGATCTCGAAGTCCCTGGGAGCAATCGACGGCGCGGCCTTCGAGCATCT
TTGCGCCCAGCTTGAGCAGGAGAGCCGGCCCTTTATCCGGGGGCGTTTTTTCCTCGACCGGATGTTCAGACCGCGACGAG
AGCATCTCACACCTGCCCACGATGCCCTTGTATGTCGTTGCGAGGAAGTCTTGGGCTCGACCCTCCACGATACAATTTTC
CGTCTGAAAGTTCTCGGCCCCAATCAGCTAAAGGCCTTTCTGCGGAGTGGAATGGGCCCATGCCAAGGACGTCAATGCAG
CCTAAGCGTCACGCAAACGATAGCAAAATTGCGCGGTGTTTCACCCGAAGATGTTGGCGCCTATCGTATCCGGCCACCTG
TCAAGCCCATCACTGTTGGGCAGATAGCCAATTTGCAAACGAGGCACAAACGCGGCCTTGAGTGTCTCCAATGA

Upstream 100 bases:

>100_bases
CAATTGACGGGGTGGCCAACCGACAGGCCTGCATGGTCAAAGTGGAAAAGGGTATGAACGTTCGAACCCAAATCGACCGG
CATCCGGGGAGGACGACCTA

Downstream 100 bases:

>100_bases
AAAGTATCAGGAAAGGAAATACGTTGATCAATAGACGATACAGAACGCCCATTATGCATCGTGCCGTAATCAGCTCGGAC
GTTATCTATTTCGGCGGCGT

Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

Products: NA

Alternate protein names: Octopine oxidase subunit A [H]

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MISLQSLMNLDDRYELIVIGAGPAGMAAAIEATRNGVKTLVLDENGAIGGQIYRSITTATPKRLAVLGKDYAGGAELART
FTESGAAYLAKATVWRLTADRELGVSHDGMAKLITGERVLVATGALERPFPIAGWTLPGVMTAGAAQILLKASGAVMGPK
MVLAGSGPLLWLLASQYLAADVPLLAILDTTPRKNVLRAIPHLPGFMASPYFRKGLGLVTKVRRAVRVYKNVDKLRAEGS
ERVERVRFSASGKEHSLELDHLLLHHGVVPEMNLLRSVGCEMAWDEEQICWHPIASAGGETSIPGIYVAGDGRAIYGAEL
ARFGGRRAALEISKSLGAIDGAAFEHLCAQLEQESRPFIRGRFFLDRMFRPRREHLTPAHDALVCRCEEVLGSTLHDTIF
RLKVLGPNQLKAFLRSGMGPCQGRQCSLSVTQTIAKLRGVSPEDVGAYRIRPPVKPITVGQIANLQTRHKRGLECLQ

Sequences:

>Translated_477_residues
MISLQSLMNLDDRYELIVIGAGPAGMAAAIEATRNGVKTLVLDENGAIGGQIYRSITTATPKRLAVLGKDYAGGAELART
FTESGAAYLAKATVWRLTADRELGVSHDGMAKLITGERVLVATGALERPFPIAGWTLPGVMTAGAAQILLKASGAVMGPK
MVLAGSGPLLWLLASQYLAADVPLLAILDTTPRKNVLRAIPHLPGFMASPYFRKGLGLVTKVRRAVRVYKNVDKLRAEGS
ERVERVRFSASGKEHSLELDHLLLHHGVVPEMNLLRSVGCEMAWDEEQICWHPIASAGGETSIPGIYVAGDGRAIYGAEL
ARFGGRRAALEISKSLGAIDGAAFEHLCAQLEQESRPFIRGRFFLDRMFRPRREHLTPAHDALVCRCEEVLGSTLHDTIF
RLKVLGPNQLKAFLRSGMGPCQGRQCSLSVTQTIAKLRGVSPEDVGAYRIRPPVKPITVGQIANLQTRHKRGLECLQ
>Mature_477_residues
MISLQSLMNLDDRYELIVIGAGPAGMAAAIEATRNGVKTLVLDENGAIGGQIYRSITTATPKRLAVLGKDYAGGAELART
FTESGAAYLAKATVWRLTADRELGVSHDGMAKLITGERVLVATGALERPFPIAGWTLPGVMTAGAAQILLKASGAVMGPK
MVLAGSGPLLWLLASQYLAADVPLLAILDTTPRKNVLRAIPHLPGFMASPYFRKGLGLVTKVRRAVRVYKNVDKLRAEGS
ERVERVRFSASGKEHSLELDHLLLHHGVVPEMNLLRSVGCEMAWDEEQICWHPIASAGGETSIPGIYVAGDGRAIYGAEL
ARFGGRRAALEISKSLGAIDGAAFEHLCAQLEQESRPFIRGRFFLDRMFRPRREHLTPAHDALVCRCEEVLGSTLHDTIF
RLKVLGPNQLKAFLRSGMGPCQGRQCSLSVTQTIAKLRGVSPEDVGAYRIRPPVKPITVGQIANLQTRHKRGLECLQ

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To T-protein and to dimethylglycine dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007419
- InterPro:   IPR013027
- InterPro:   IPR017224
- InterPro:   IPR000103 [H]

Pfam domain/function: PF04324 Fer2_BFD; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 51618; Mature: 51618

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLQSLMNLDDRYELIVIGAGPAGMAAAIEATRNGVKTLVLDENGAIGGQIYRSITTAT
CCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCC
PKRLAVLGKDYAGGAELARTFTESGAAYLAKATVWRLTADRELGVSHDGMAKLITGERVL
CHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCCCCCCHHHCCCCEEE
VATGALERPFPIAGWTLPGVMTAGAAQILLKASGAVMGPKMVLAGSGPLLWLLASQYLAA
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHC
DVPLLAILDTTPRKNVLRAIPHLPGFMASPYFRKGLGLVTKVRRAVRVYKNVDKLRAEGS
CCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ERVERVRFSASGKEHSLELDHLLLHHGVVPEMNLLRSVGCEMAWDEEQICWHPIASAGGE
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC
TSIPGIYVAGDGRAIYGAELARFGGRRAALEISKSLGAIDGAAFEHLCAQLEQESRPFIR
CCCCEEEEECCCCEEHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
GRFFLDRMFRPRREHLTPAHDALVCRCEEVLGSTLHDTIFRLKVLGPNQLKAFLRSGMGP
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHEEEECCHHHHHHHHHCCCCC
CQGRQCSLSVTQTIAKLRGVSPEDVGAYRIRPPVKPITVGQIANLQTRHKRGLECLQ
CCCCEEEHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEHHHHHCHHHHHHHCHHHCC
>Mature Secondary Structure
MISLQSLMNLDDRYELIVIGAGPAGMAAAIEATRNGVKTLVLDENGAIGGQIYRSITTAT
CCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCC
PKRLAVLGKDYAGGAELARTFTESGAAYLAKATVWRLTADRELGVSHDGMAKLITGERVL
CHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCCCCCCHHHCCCCEEE
VATGALERPFPIAGWTLPGVMTAGAAQILLKASGAVMGPKMVLAGSGPLLWLLASQYLAA
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHC
DVPLLAILDTTPRKNVLRAIPHLPGFMASPYFRKGLGLVTKVRRAVRVYKNVDKLRAEGS
CCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ERVERVRFSASGKEHSLELDHLLLHHGVVPEMNLLRSVGCEMAWDEEQICWHPIASAGGE
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC
TSIPGIYVAGDGRAIYGAELARFGGRRAALEISKSLGAIDGAAFEHLCAQLEQESRPFIR
CCCCEEEEECCCCEEHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
GRFFLDRMFRPRREHLTPAHDALVCRCEEVLGSTLHDTIFRLKVLGPNQLKAFLRSGMGP
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHEEEECCHHHHHHHHHCCCCC
CQGRQCSLSVTQTIAKLRGVSPEDVGAYRIRPPVKPITVGQIANLQTRHKRGLECLQ
CCCCEEEHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEHHHHHCHHHHHHHCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA