| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is hisD2 [H]
Identifier: 110634278
GI number: 110634278
Start: 2064253
End: 2065578
Strand: Reverse
Name: hisD2 [H]
Synonym: Meso_1928
Alternate gene names: 110634278
Gene position: 2065578-2064253 (Counterclockwise)
Preceding gene: 110634279
Following gene: 110634274
Centisome position: 46.81
GC content: 54.9
Gene sequence:
>1326_bases ATGCCTAAATACTTGAAGAGTTCTGGCACGCCCCGAGGGAATGTCAGCAATCTCAAGGTGCGACAGACGGTAGAACGTAT CATCGAGGATGTCGAACGCGAGAAAGACTTGGCTGTCCGGCGCCTATCAATAGAGTTTGATGGATACGACCGTCAGACCT ACAGGCTATCTGCACAGGAAATCCAATATTGCATCGATTGGTTGGCCAAAGAAGATCTGGACGATATTCTTTTTGCACAG GAGCAGGTCCGGAACTTCGCCAGGAAGCAGCGCGATTGCCTGCTTGACCTGGAAGTCGAAACCTATCCTGGCGTTGTGTT AGGCCACCGCAATATCCCGATCGCCAATGTCGGCTGTTATGTACCGGGTGGCAAGTATCCGCTTCTGGCGTCTGCGCACA TGTCCGTGGTGACCGCAAAGGTGGCCGGAGTCGAGAGGATTATCACATGTGCTCCGCCGGTGAATGGTCGTCCATCTCCT GCGATCGTAGCGGCTCAACATCTGGCAGGCGCGGACGAGATATATTGCCTGGGAGGCGTACAAGCGGTTGTCGCTATGGC CTTGGGAACCGAATCCATTGCCGCCGTTGATATGCTTGTAGGTCCTGGCAATGCGTATGTCGCAGAAGCAAAACGCCAGC TATATGGGCGTGTCGGAATTGATCTGTTTGCGGGCCCGACGGAAACGCTGATCATTGCCGATGAAACGGCTGATGCCCTT ACCTGTGCTACCGACATCCTCGGCCAAGCCGAGCACGGACCAGATTCGCCGGCCATATTGCTGACGACGAGTGAGTCCTT GGCTGTTGAGACACTGCGTCAAATCGAAGAACTACTCTCGGTGCTTCCCACGGCGGAAATCGCTCGGAAAGCATGGGAGG CTCACGGCGAGATCATCATCTGCAAGGACGACGCCGAACTTGTCGTCGAAGCCGATCGTATCGCGTCGGAGCATGTGCAG GTTATGACGCGTGATCCGGACTATTTCTTGGAAAATATGCGCAACTACGGCGCTCTTTTTCTTGGCGAACGGACAAATGT GGCCTATGGCGATAAGGTCATCGGCACCAACCATACGCTGCCGACGTTGGGCGCTGCGCGATATACCGGAGGACTGTGGG TTGGGAAGTTTCTGAAGACGTGCACCTATCAGCGCGTGCTCACTGACGAAGCTTCCGTGTATTTTGGCGAGTACTGTTCC CGGTTGAGCATGCTTGAAGGATTTGTCGGTCACACGGAACAGGCCAATATCAGGCTGAGACGTTTTGGTGGACGATCTGT GCCTTACGGGACTGCTGCAGATCGTGTCATCGGGCCCCATGGCTAG
Upstream 100 bases:
>100_bases GATCGGCAGCCCTAGCCCGACCAGGGCGCGGGAAGAACCACAATTAGCTAGTCACAAGGAGACGACAGCCGGAGTAGGGC TTCGTCCCAGGGAGAAAGTC
Downstream 100 bases:
>100_bases TTTGTATCGTTTCCGCTTTAAGAACCATTATAGAGCTTCGGTGGCGATGCCGTAGCCCTATCTCCGCCGGATCGATGTAT TAGAATCATCCAAGCGGTTC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 2 [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MPKYLKSSGTPRGNVSNLKVRQTVERIIEDVEREKDLAVRRLSIEFDGYDRQTYRLSAQEIQYCIDWLAKEDLDDILFAQ EQVRNFARKQRDCLLDLEVETYPGVVLGHRNIPIANVGCYVPGGKYPLLASAHMSVVTAKVAGVERIITCAPPVNGRPSP AIVAAQHLAGADEIYCLGGVQAVVAMALGTESIAAVDMLVGPGNAYVAEAKRQLYGRVGIDLFAGPTETLIIADETADAL TCATDILGQAEHGPDSPAILLTTSESLAVETLRQIEELLSVLPTAEIARKAWEAHGEIIICKDDAELVVEADRIASEHVQ VMTRDPDYFLENMRNYGALFLGERTNVAYGDKVIGTNHTLPTLGAARYTGGLWVGKFLKTCTYQRVLTDEASVYFGEYCS RLSMLEGFVGHTEQANIRLRRFGGRSVPYGTAADRVIGPHG
Sequences:
>Translated_441_residues MPKYLKSSGTPRGNVSNLKVRQTVERIIEDVEREKDLAVRRLSIEFDGYDRQTYRLSAQEIQYCIDWLAKEDLDDILFAQ EQVRNFARKQRDCLLDLEVETYPGVVLGHRNIPIANVGCYVPGGKYPLLASAHMSVVTAKVAGVERIITCAPPVNGRPSP AIVAAQHLAGADEIYCLGGVQAVVAMALGTESIAAVDMLVGPGNAYVAEAKRQLYGRVGIDLFAGPTETLIIADETADAL TCATDILGQAEHGPDSPAILLTTSESLAVETLRQIEELLSVLPTAEIARKAWEAHGEIIICKDDAELVVEADRIASEHVQ VMTRDPDYFLENMRNYGALFLGERTNVAYGDKVIGTNHTLPTLGAARYTGGLWVGKFLKTCTYQRVLTDEASVYFGEYCS RLSMLEGFVGHTEQANIRLRRFGGRSVPYGTAADRVIGPHG >Mature_440_residues PKYLKSSGTPRGNVSNLKVRQTVERIIEDVEREKDLAVRRLSIEFDGYDRQTYRLSAQEIQYCIDWLAKEDLDDILFAQE QVRNFARKQRDCLLDLEVETYPGVVLGHRNIPIANVGCYVPGGKYPLLASAHMSVVTAKVAGVERIITCAPPVNGRPSPA IVAAQHLAGADEIYCLGGVQAVVAMALGTESIAAVDMLVGPGNAYVAEAKRQLYGRVGIDLFAGPTETLIIADETADALT CATDILGQAEHGPDSPAILLTTSESLAVETLRQIEELLSVLPTAEIARKAWEAHGEIIICKDDAELVVEADRIASEHVQV MTRDPDYFLENMRNYGALFLGERTNVAYGDKVIGTNHTLPTLGAARYTGGLWVGKFLKTCTYQRVLTDEASVYFGEYCSR LSMLEGFVGHTEQANIRLRRFGGRSVPYGTAADRVIGPHG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=405, Percent_Identity=35.3086419753086, Blast_Score=239, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6319819, Length=415, Percent_Identity=34.9397590361446, Blast_Score=206, Evalue=6e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 48202; Mature: 48071
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYLKSSGTPRGNVSNLKVRQTVERIIEDVEREKDLAVRRLSIEFDGYDRQTYRLSAQE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEECHHH IQYCIDWLAKEDLDDILFAQEQVRNFARKQRDCLLDLEVETYPGVVLGHRNIPIANVGCY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEEEE VPGGKYPLLASAHMSVVTAKVAGVERIITCAPPVNGRPSPAIVAAQHLAGADEIYCLGGV CCCCCCCEEEHHHHHHHHHHHHCHHEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECHH QAVVAMALGTESIAAVDMLVGPGNAYVAEAKRQLYGRVGIDLFAGPTETLIIADETADAL HHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCHH TCATDILGQAEHGPDSPAILLTTSESLAVETLRQIEELLSVLPTAEIARKAWEAHGEIII HHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEE CKDDAELVVEADRIASEHVQVMTRDPDYFLENMRNYGALFLGERTNVAYGDKVIGTNHTL EECCCCEEEEHHHHHHHHHEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCC PTLGAARYTGGLWVGKFLKTCTYQRVLTDEASVYFGEYCSRLSMLEGFVGHTEQANIRLR CCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE RFGGRSVPYGTAADRVIGPHG ECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKYLKSSGTPRGNVSNLKVRQTVERIIEDVEREKDLAVRRLSIEFDGYDRQTYRLSAQE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEECHHH IQYCIDWLAKEDLDDILFAQEQVRNFARKQRDCLLDLEVETYPGVVLGHRNIPIANVGCY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEEEE VPGGKYPLLASAHMSVVTAKVAGVERIITCAPPVNGRPSPAIVAAQHLAGADEIYCLGGV CCCCCCCEEEHHHHHHHHHHHHCHHEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECHH QAVVAMALGTESIAAVDMLVGPGNAYVAEAKRQLYGRVGIDLFAGPTETLIIADETADAL HHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCHH TCATDILGQAEHGPDSPAILLTTSESLAVETLRQIEELLSVLPTAEIARKAWEAHGEIII HHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEE CKDDAELVVEADRIASEHVQVMTRDPDYFLENMRNYGALFLGERTNVAYGDKVIGTNHTL EECCCCEEEEHHHHHHHHHEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCC PTLGAARYTGGLWVGKFLKTCTYQRVLTDEASVYFGEYCSRLSMLEGFVGHTEQANIRLR CCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE RFGGRSVPYGTAADRVIGPHG ECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]