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The map label for this gene is dadA [H]

Identifier: 110634216

GI number: 110634216

Start: 2005449

End: 2006753

Strand: Reverse

Name: dadA [H]

Synonym: Meso_1866

Alternate gene names: 110634216

Gene position: 2006753-2005449 (Counterclockwise)

Preceding gene: 110634218

Following gene: 110634215

Centisome position: 45.48

GC content: 64.29

Gene sequence:

>1305_bases
ATGACCGTTGAAACAGCACCGCCTTCAGTGCTTCCGAGGCTGCCGGAAGACGGACGCACCTATGTCGTCGTGGTCGGAGC
GGGCATTGTCGGACTGTCGTCGGCTCTCTGGCTGCAAAAGGCAGGGCATGCGGTCGCGATCGTCGACCCGGAACCGCCGC
TGCCCGGGTCCGGCTACCTGAATGCGGCAAGCTTCGGCAACGCCTGCACCGTGGCGCTCGGCGCTTGCATACCCGTCGGA
ACCCCCGGCATCTTGCGCGAACTGCCCAGCATGCTCCTGAAGCGCAGCAGTCCCCTGTCCATCTTCTGGGGTGATCTGCC
ACGGCTTCTGCCCTGGCTGATCGATTTCCTGCGGTCGTCCACTCAAAAGGAATTCGATCGCATCGTCGGCGTCCTTGGGA
AGCTGATGAGGCTGGCGGAGGCGGGACACAACCCGCTTTTCGAAGAAGCGCAGGCGACGCATTTGAAGAAATCGGATGGA
TGCCTGTACCTCTACCGTTCTGAACGCAGCTTCCAGCGGGCGCAGCGCGACATCGAGCTGCGGCGGCGCGAGGGCGTGCG
CATGGAACTGCTCGATCGGAAGGCGGTCAAGGAACGGGAGCCGCATCTGGCGCCGCTCTACAGCAATGGGCTGCTGTTCA
ACGACGCTTACAGGATAGACGATGCGCTGCAGTATGCGCAGGCCCTCGCCGCGTTGTTCCAGAAGAAGGGTGGCAAGTTC
ATCAGGAGCCGCGCTCGCGCGATCGAGCCGGGCGAGCAAAGCCTCGCCGTGCATTGTGAAGACGGGCACACAATCAAGGC
GGATCGCGTGGTTGTCGCGGCGGGCGGATGGTCGCGCCACCTGGCGCTCACCTTGGGCGACAGGATACGGCTCGATGTCG
AGCGCGGCTATCACGTTCTCTTCCCGCGCGACGGAAGCCTCCTGGGTGCTCCGACGTGCTACCCGGAGCACGGCTTCTAC
ATGACGCCGCTCGGCGAGGGGCTGCGGTCGGCAGGCACTGTGGAGCTTGGCGGCCTCGGCAAGCCGGCGCGGCCAGAAAG
AACCGAAATCATCGAGAGGATGAGCCGCGTTCTCCTGCCGGGGCTGAGAGACTCCGGCAGGAAATGGCTCGGCTACCGCC
CATCCATGCCGGATTCGCTTCCCGTGATCTCGCGGTCGCCTTCCGATTCGAGGGTAACTTATGCGTTCGGCCATGGGCAC
ATAGGGCTCACGCTCGCCGGCATCACCGGGCGGCTGGTTTGCGACCTTGTCGGCGGTCGGACTCCGGTCATCGATCTTCA
TCCGCTGCGCGCGGATCGTTTCTAG

Upstream 100 bases:

>100_bases
CCTCTACATATCAATTTTGCGGTTGACACAATCCTCTTATCATATGAGTAAATAGGCTACTCATATCATAAGAGGAAAGA
CCCCTACGGTGCCCCTCCCG

Downstream 100 bases:

>100_bases
GACACGCGCGGAAACAATTCACGCAGGGAGGAAGAAGTATATATTGAAGGAAAATGTTATTGCAAAGAATACAATGATAA
ATGTGGAATTCTATTTGTAA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTVETAPPSVLPRLPEDGRTYVVVVGAGIVGLSSALWLQKAGHAVAIVDPEPPLPGSGYLNAASFGNACTVALGACIPVG
TPGILRELPSMLLKRSSPLSIFWGDLPRLLPWLIDFLRSSTQKEFDRIVGVLGKLMRLAEAGHNPLFEEAQATHLKKSDG
CLYLYRSERSFQRAQRDIELRRREGVRMELLDRKAVKEREPHLAPLYSNGLLFNDAYRIDDALQYAQALAALFQKKGGKF
IRSRARAIEPGEQSLAVHCEDGHTIKADRVVVAAGGWSRHLALTLGDRIRLDVERGYHVLFPRDGSLLGAPTCYPEHGFY
MTPLGEGLRSAGTVELGGLGKPARPERTEIIERMSRVLLPGLRDSGRKWLGYRPSMPDSLPVISRSPSDSRVTYAFGHGH
IGLTLAGITGRLVCDLVGGRTPVIDLHPLRADRF

Sequences:

>Translated_434_residues
MTVETAPPSVLPRLPEDGRTYVVVVGAGIVGLSSALWLQKAGHAVAIVDPEPPLPGSGYLNAASFGNACTVALGACIPVG
TPGILRELPSMLLKRSSPLSIFWGDLPRLLPWLIDFLRSSTQKEFDRIVGVLGKLMRLAEAGHNPLFEEAQATHLKKSDG
CLYLYRSERSFQRAQRDIELRRREGVRMELLDRKAVKEREPHLAPLYSNGLLFNDAYRIDDALQYAQALAALFQKKGGKF
IRSRARAIEPGEQSLAVHCEDGHTIKADRVVVAAGGWSRHLALTLGDRIRLDVERGYHVLFPRDGSLLGAPTCYPEHGFY
MTPLGEGLRSAGTVELGGLGKPARPERTEIIERMSRVLLPGLRDSGRKWLGYRPSMPDSLPVISRSPSDSRVTYAFGHGH
IGLTLAGITGRLVCDLVGGRTPVIDLHPLRADRF
>Mature_433_residues
TVETAPPSVLPRLPEDGRTYVVVVGAGIVGLSSALWLQKAGHAVAIVDPEPPLPGSGYLNAASFGNACTVALGACIPVGT
PGILRELPSMLLKRSSPLSIFWGDLPRLLPWLIDFLRSSTQKEFDRIVGVLGKLMRLAEAGHNPLFEEAQATHLKKSDGC
LYLYRSERSFQRAQRDIELRRREGVRMELLDRKAVKEREPHLAPLYSNGLLFNDAYRIDDALQYAQALAALFQKKGGKFI
RSRARAIEPGEQSLAVHCEDGHTIKADRVVVAAGGWSRHLALTLGDRIRLDVERGYHVLFPRDGSLLGAPTCYPEHGFYM
TPLGEGLRSAGTVELGGLGKPARPERTEIIERMSRVLLPGLRDSGRKWLGYRPSMPDSLPVISRSPSDSRVTYAFGHGHI
GLTLAGITGRLVCDLVGGRTPVIDLHPLRADRF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=427, Percent_Identity=29.7423887587822, Blast_Score=151, Evalue=9e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47567; Mature: 47435

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVETAPPSVLPRLPEDGRTYVVVVGAGIVGLSSALWLQKAGHAVAIVDPEPPLPGSGYL
CCCCCCCCHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCE
NAASFGNACTVALGACIPVGTPGILRELPSMLLKRSSPLSIFWGDLPRLLPWLIDFLRSS
ECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCC
TQKEFDRIVGVLGKLMRLAEAGHNPLFEEAQATHLKKSDGCLYLYRSERSFQRAQRDIEL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH
RRREGVRMELLDRKAVKEREPHLAPLYSNGLLFNDAYRIDDALQYAQALAALFQKKGGKF
HHHCCCCHHHHHHHHHHHCCCCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHH
IRSRARAIEPGEQSLAVHCEDGHTIKADRVVVAAGGWSRHLALTLGDRIRLDVERGYHVL
HHHHHHCCCCCCCCEEEEECCCCEEEECEEEEEECCCCEEEEEEECCEEEEEECCCEEEE
FPRDGSLLGAPTCYPEHGFYMTPLGEGLRSAGTVELGGLGKPARPERTEIIERMSRVLLP
ECCCCCEECCCCCCCCCCEEECCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHCC
GLRDSGRKWLGYRPSMPDSLPVISRSPSDSRVTYAFGHGHIGLTLAGITGRLVCDLVGGR
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHCCC
TPVIDLHPLRADRF
CCEEEEECCCCCCC
>Mature Secondary Structure 
TVETAPPSVLPRLPEDGRTYVVVVGAGIVGLSSALWLQKAGHAVAIVDPEPPLPGSGYL
CCCCCCCHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCE
NAASFGNACTVALGACIPVGTPGILRELPSMLLKRSSPLSIFWGDLPRLLPWLIDFLRSS
ECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCC
TQKEFDRIVGVLGKLMRLAEAGHNPLFEEAQATHLKKSDGCLYLYRSERSFQRAQRDIEL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH
RRREGVRMELLDRKAVKEREPHLAPLYSNGLLFNDAYRIDDALQYAQALAALFQKKGGKF
HHHCCCCHHHHHHHHHHHCCCCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHH
IRSRARAIEPGEQSLAVHCEDGHTIKADRVVVAAGGWSRHLALTLGDRIRLDVERGYHVL
HHHHHHCCCCCCCCEEEEECCCCEEEECEEEEEECCCCEEEEEEECCEEEEEECCCEEEE
FPRDGSLLGAPTCYPEHGFYMTPLGEGLRSAGTVELGGLGKPARPERTEIIERMSRVLLP
ECCCCCEECCCCCCCCCCEEECCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHCC
GLRDSGRKWLGYRPSMPDSLPVISRSPSDSRVTYAFGHGHIGLTLAGITGRLVCDLVGGR
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHCCC
TPVIDLHPLRADRF
CCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA