| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110634144
Identifier: 110634144
GI number: 110634144
Start: 1918307
End: 1920064
Strand: Reverse
Name: 110634144
Synonym: Meso_1793
Alternate gene names: NA
Gene position: 1920064-1918307 (Counterclockwise)
Preceding gene: 110634145
Following gene: 110634141
Centisome position: 43.51
GC content: 60.58
Gene sequence:
>1758_bases ATGACGGCGCTGACGGAGTTCAAGAACGGAAAAACCGGCTTGCGGTACGTCATCCTAGAGATGCTGACCGGTCTAAGGGC AGCATTTCTGCGCTTCCCGGTTCCATCCCTTTTTCTTGCTGCTGCTTCAATCCAGGCGGCACTGCTGATCGCCGATGTCC ATCTCTTCCGCTTCGTGGCGGAATCAGAGGCGTCGGAAGTCTTTGTCGTCGGTCTCGTGGCCGGGGCGCTTGCGGCACTT GCGGCGGCCCTTTTTGGGGAGGCTCGCGGTCTTTCCGCGGTGGCGCGGATCGCGGTGGGTCTCGCCGCCGGGTTCTTTGC CGCAGCTCTGGTGTCCTTTCCGGAAACATTCCTCTCGATCGAGTGGGCACTGGTGGGCGCCTTGATCGGCCTCGTTCTCG TTGCACCATTTATCGGGCGCGGCACGAGCGGCTCATTCTGGATGTTTTCGGCGCATGCCGCCTTCGCGGCGCTCCTGGGC CTGTTGACCCTGTTGCTTTTTGCCGGCGGCATCTCGGCCATCATGGCGAGCCTCACGGTTCTCTTCGGCTTTGAAGTGCC TGACGATCTTTACGCTTATGTCTGGGCTTTCACCGGCCTTTTCGCGGCCCCTGTCTTTGCGATGGGACAGTTTCCCGACC GGTTTGACGAGCAACCCAATCAGGTGATGACCGGCTTTATGGATCGCGGCATGCGGGCGTTGGGCGATTTTATCGCCGCT CCCCTGCTTATCGTCTATGCGCTGATCCTGCACTTCTACGCCCTGAAGATCGTGGTGACAGGCGAGGTGCCTGAGGGACA GATCGGCTGGCTGGTGCTTGTCTACGGTCTTTGCATCTTCGGCGCGCTTCTGGTCATCAATCCGTTTTTCGACCAGGCCC GGACCCCGACGCGGTTTTTCCTGCGAGTCTGGCCCTTTTTCCTGCCGGTGCCGCTGGTTCTCCTGTTTTATGCGCTGGGT GTAAGGATCAGCACCTATGGCGTGACGCCGGAACGCTACCTTCTGGGGCTTTTCGGGCTGATAACCGCGCTCATTCTGGT CATTCAACTTGTACCGCGCCTGCGGGGTGACATCCGCGTCATCGCTGGTGTCCCTGTCGCGGCGCTTATCCTCGGCGGCT TCGGGCCACAGGGGGCGGTGGGGGTTTCCATCCAAAGCCAGTCCGCCCGGTTTCTTTCCATTGTCGAGAACCCGCCGGTG GAAGGCCCGCGCCATGATGAAGCATTGGCTGCGCTGCAATTTCTGAACGGCCAGCGCGCCCTGGATCGAGTGGCGCCGGA AGGCACAGACACGTCCTACAAGGATGGCGAGGGCTATCGGGCGACCGCCTCGGCATGGGGATTGGATCCGCTGCAACCGA GCAAGGGGCCGAGGGGCTTCTCATTTGCTTCCGGGTCAGACCCCGCGGTCTTCGCCGTAACCGGTTTTGATGTCATCGCA CAAAATGTCATGCTTGCCGTGGGAGCTGATGCTGCCGTTTCGATCACGCTGCCTGCGGGATCCAAGCTCGATTTTACGCT CGAGCCGGATGCCATTGTCATTGGGACGGGCGAGGAAAAAACGCGCTTTCCCGTCTCCGCGAGCGATATCGAGCAAATGG CGAGGGAGAGTGCGGCCAACGAGCCTGTCCGGCTTCCCCTGCAATCCGCCGGCCGGCAAATTCTGTTCCTGCCTTCCTAC ATTTATGCAGATATCGACGAATCTTCACGCCTGCAGAATCTGCAGGGCACCGTCCTGCTTCGTGCCCAGGACTGGTAA
Upstream 100 bases:
>100_bases CTTGTGCAAATCTGGCGTGCATAGACTGCAATTTCGCCACTCTTCCTTTGCTCCAATGCGGCGTTTTCATTACCGTTTTT TTGCAACGGAGAAATTGACA
Downstream 100 bases:
>100_bases CAGAGTTTATTCGGCAGCCGCGCGGGTCGGAACACCAAGCCAGTCGCTGCAATCGGCAAGAGCCCGCGCGGTGATCGCGC GCTTCTTTGCAAGCGTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 584
Protein sequence:
>585_residues MTALTEFKNGKTGLRYVILEMLTGLRAAFLRFPVPSLFLAAASIQAALLIADVHLFRFVAESEASEVFVVGLVAGALAAL AAALFGEARGLSAVARIAVGLAAGFFAAALVSFPETFLSIEWALVGALIGLVLVAPFIGRGTSGSFWMFSAHAAFAALLG LLTLLLFAGGISAIMASLTVLFGFEVPDDLYAYVWAFTGLFAAPVFAMGQFPDRFDEQPNQVMTGFMDRGMRALGDFIAA PLLIVYALILHFYALKIVVTGEVPEGQIGWLVLVYGLCIFGALLVINPFFDQARTPTRFFLRVWPFFLPVPLVLLFYALG VRISTYGVTPERYLLGLFGLITALILVIQLVPRLRGDIRVIAGVPVAALILGGFGPQGAVGVSIQSQSARFLSIVENPPV EGPRHDEALAALQFLNGQRALDRVAPEGTDTSYKDGEGYRATASAWGLDPLQPSKGPRGFSFASGSDPAVFAVTGFDVIA QNVMLAVGADAAVSITLPAGSKLDFTLEPDAIVIGTGEEKTRFPVSASDIEQMARESAANEPVRLPLQSAGRQILFLPSY IYADIDESSRLQNLQGTVLLRAQDW
Sequences:
>Translated_585_residues MTALTEFKNGKTGLRYVILEMLTGLRAAFLRFPVPSLFLAAASIQAALLIADVHLFRFVAESEASEVFVVGLVAGALAAL AAALFGEARGLSAVARIAVGLAAGFFAAALVSFPETFLSIEWALVGALIGLVLVAPFIGRGTSGSFWMFSAHAAFAALLG LLTLLLFAGGISAIMASLTVLFGFEVPDDLYAYVWAFTGLFAAPVFAMGQFPDRFDEQPNQVMTGFMDRGMRALGDFIAA PLLIVYALILHFYALKIVVTGEVPEGQIGWLVLVYGLCIFGALLVINPFFDQARTPTRFFLRVWPFFLPVPLVLLFYALG VRISTYGVTPERYLLGLFGLITALILVIQLVPRLRGDIRVIAGVPVAALILGGFGPQGAVGVSIQSQSARFLSIVENPPV EGPRHDEALAALQFLNGQRALDRVAPEGTDTSYKDGEGYRATASAWGLDPLQPSKGPRGFSFASGSDPAVFAVTGFDVIA QNVMLAVGADAAVSITLPAGSKLDFTLEPDAIVIGTGEEKTRFPVSASDIEQMARESAANEPVRLPLQSAGRQILFLPSY IYADIDESSRLQNLQGTVLLRAQDW >Mature_584_residues TALTEFKNGKTGLRYVILEMLTGLRAAFLRFPVPSLFLAAASIQAALLIADVHLFRFVAESEASEVFVVGLVAGALAALA AALFGEARGLSAVARIAVGLAAGFFAAALVSFPETFLSIEWALVGALIGLVLVAPFIGRGTSGSFWMFSAHAAFAALLGL LTLLLFAGGISAIMASLTVLFGFEVPDDLYAYVWAFTGLFAAPVFAMGQFPDRFDEQPNQVMTGFMDRGMRALGDFIAAP LLIVYALILHFYALKIVVTGEVPEGQIGWLVLVYGLCIFGALLVINPFFDQARTPTRFFLRVWPFFLPVPLVLLFYALGV RISTYGVTPERYLLGLFGLITALILVIQLVPRLRGDIRVIAGVPVAALILGGFGPQGAVGVSIQSQSARFLSIVENPPVE GPRHDEALAALQFLNGQRALDRVAPEGTDTSYKDGEGYRATASAWGLDPLQPSKGPRGFSFASGSDPAVFAVTGFDVIAQ NVMLAVGADAAVSITLPAGSKLDFTLEPDAIVIGTGEEKTRFPVSASDIEQMARESAANEPVRLPLQSAGRQILFLPSYI YADIDESSRLQNLQGTVLLRAQDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62439; Mature: 62307
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALTEFKNGKTGLRYVILEMLTGLRAAFLRFPVPSLFLAAASIQAALLIADVHLFRFVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ESEASEVFVVGLVAGALAALAAALFGEARGLSAVARIAVGLAAGFFAAALVSFPETFLSI HCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWALVGALIGLVLVAPFIGRGTSGSFWMFSAHAAFAALLGLLTLLLFAGGISAIMASLTV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LFGFEVPDDLYAYVWAFTGLFAAPVFAMGQFPDRFDEQPNQVMTGFMDRGMRALGDFIAA HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH PLLIVYALILHFYALKIVVTGEVPEGQIGWLVLVYGLCIFGALLVINPFFDQARTPTRFF HHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LRVWPFFLPVPLVLLFYALGVRISTYGVTPERYLLGLFGLITALILVIQLVPRLRGDIRV HHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IAGVPVAALILGGFGPQGAVGVSIQSQSARFLSIVENPPVEGPRHDEALAALQFLNGQRA EECCHHHHHHHCCCCCCCCEEEEEECCCCHHHEEECCCCCCCCCCHHHHHHHHHHCCHHH LDRVAPEGTDTSYKDGEGYRATASAWGLDPLQPSKGPRGFSFASGSDPAVFAVTGFDVIA HHHCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHH QNVMLAVGADAAVSITLPAGSKLDFTLEPDAIVIGTGEEKTRFPVSASDIEQMARESAAN HHHHHEECCCCEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCC EPVRLPLQSAGRQILFLPSYIYADIDESSRLQNLQGTVLLRAQDW CCEECCHHHCCCEEEEECHHHEECCCCHHHHHCCCCEEEEEECCC >Mature Secondary Structure TALTEFKNGKTGLRYVILEMLTGLRAAFLRFPVPSLFLAAASIQAALLIADVHLFRFVA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ESEASEVFVVGLVAGALAALAAALFGEARGLSAVARIAVGLAAGFFAAALVSFPETFLSI HCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWALVGALIGLVLVAPFIGRGTSGSFWMFSAHAAFAALLGLLTLLLFAGGISAIMASLTV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LFGFEVPDDLYAYVWAFTGLFAAPVFAMGQFPDRFDEQPNQVMTGFMDRGMRALGDFIAA HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH PLLIVYALILHFYALKIVVTGEVPEGQIGWLVLVYGLCIFGALLVINPFFDQARTPTRFF HHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LRVWPFFLPVPLVLLFYALGVRISTYGVTPERYLLGLFGLITALILVIQLVPRLRGDIRV HHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IAGVPVAALILGGFGPQGAVGVSIQSQSARFLSIVENPPVEGPRHDEALAALQFLNGQRA EECCHHHHHHHCCCCCCCCEEEEEECCCCHHHEEECCCCCCCCCCHHHHHHHHHHCCHHH LDRVAPEGTDTSYKDGEGYRATASAWGLDPLQPSKGPRGFSFASGSDPAVFAVTGFDVIA HHHCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHH QNVMLAVGADAAVSITLPAGSKLDFTLEPDAIVIGTGEEKTRFPVSASDIEQMARESAAN HHHHHEECCCCEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCC EPVRLPLQSAGRQILFLPSYIYADIDESSRLQNLQGTVLLRAQDW CCEECCHHHCCCEEEEECHHHEECCCCHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA