| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110634083
Identifier: 110634083
GI number: 110634083
Start: 1852615
End: 1853097
Strand: Reverse
Name: 110634083
Synonym: Meso_1732
Alternate gene names: NA
Gene position: 1853097-1852615 (Counterclockwise)
Preceding gene: 110634084
Following gene: 110634082
Centisome position: 42.0
GC content: 58.39
Gene sequence:
>483_bases ATGCGTCTCTTCCTGCTGATCCTGCTCCTTTTTCCCTTAGGCCTGACTTTCAGTTCGAACGCCCGGGCGGAGCAACCGAT GCTGCTGCAAGTGCATCCGGCTCCGCTCGTGGCTGAAACGGCCAGCGGTGAGAAAAGCTTTTCGATCGAAGTGGCGGATG ACAATTCCGAACGCCAGCGGGGGCTTATGTTCCGCGAAACCATGAAGGATGATCGGGGCATGCTCTTCGTCTTCCCGGTG AGCAGGCAGCATGGGTTTTGGATGCAGAATACCCCCATGCCGCTCGACCTTCTGTTCATCGGGGAAGACGGAAAAGTGAA AGCCATAGAGCAGGGGGTGCCGTTCTCGACGGACAGTATTTCGCCCCCGGTCCAGGCGCGGTTCGTGCTTGAACTCAAGG CCGGAACGGCGGAAAAAACGGGTATCGCCGTAGGCGATCGTCTCCATCATCCGCTCATCGACGCGGTGGCTGGTGAAAGC TAG
Upstream 100 bases:
>100_bases CGATAAGGGCCTTATGGCTGCCGAAATTCATCCTGATATTGGCACTTTGCCGGTTTCCCACTGACGTCCCGGGCAGGCGA AGCGCCCAGAGGAAAACCCG
Downstream 100 bases:
>100_bases GCAGCAGGCGGTAACGGGGCAGATGCAGTTTTTCAGTCACGACGGTTTCGAACTCGCCTTCATCGACGAAGGCGAGGGTG ACCCGATCCTTCTAATCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MRLFLLILLLFPLGLTFSSNARAEQPMLLQVHPAPLVAETASGEKSFSIEVADDNSERQRGLMFRETMKDDRGMLFVFPV SRQHGFWMQNTPMPLDLLFIGEDGKVKAIEQGVPFSTDSISPPVQARFVLELKAGTAEKTGIAVGDRLHHPLIDAVAGES
Sequences:
>Translated_160_residues MRLFLLILLLFPLGLTFSSNARAEQPMLLQVHPAPLVAETASGEKSFSIEVADDNSERQRGLMFRETMKDDRGMLFVFPV SRQHGFWMQNTPMPLDLLFIGEDGKVKAIEQGVPFSTDSISPPVQARFVLELKAGTAEKTGIAVGDRLHHPLIDAVAGES >Mature_160_residues MRLFLLILLLFPLGLTFSSNARAEQPMLLQVHPAPLVAETASGEKSFSIEVADDNSERQRGLMFRETMKDDRGMLFVFPV SRQHGFWMQNTPMPLDLLFIGEDGKVKAIEQGVPFSTDSISPPVQARFVLELKAGTAEKTGIAVGDRLHHPLIDAVAGES
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17649; Mature: 17649
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFLLILLLFPLGLTFSSNARAEQPMLLQVHPAPLVAETASGEKSFSIEVADDNSERQR CHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCHHHH GLMFRETMKDDRGMLFVFPVSRQHGFWMQNTPMPLDLLFIGEDGKVKAIEQGVPFSTDSI CHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCC SPPVQARFVLELKAGTAEKTGIAVGDRLHHPLIDAVAGES CCCCEEEEEEEEECCCCCCCCEEECCHHCCHHHHHHCCCC >Mature Secondary Structure MRLFLLILLLFPLGLTFSSNARAEQPMLLQVHPAPLVAETASGEKSFSIEVADDNSERQR CHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCHHHH GLMFRETMKDDRGMLFVFPVSRQHGFWMQNTPMPLDLLFIGEDGKVKAIEQGVPFSTDSI CHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCC SPPVQARFVLELKAGTAEKTGIAVGDRLHHPLIDAVAGES CCCCEEEEEEEEECCCCCCCCEEECCHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA