| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is ywbO [H]
Identifier: 110634052
GI number: 110634052
Start: 1818236
End: 1818919
Strand: Direct
Name: ywbO [H]
Synonym: Meso_1700
Alternate gene names: 110634052
Gene position: 1818236-1818919 (Clockwise)
Preceding gene: 110634051
Following gene: 110634053
Centisome position: 41.21
GC content: 61.7
Gene sequence:
>684_bases ATGAGCGACAAGCCAGCCCTCAGCGTCAATGTCGTCTCCGATGTCGTGTGTCCCTGGTGTTTCCTGGGTATGCGAAATCT CCAGCTTGCGCTGGCCGATCTCAGGGATATCGACGTCATGGTGCGCTGGCGCCCCTATCAACTCGATCCTACGATCCCGT CGGAAGGCCTCGACCGCAAAGCCTACATGGTCCAGAAATTCGGCAGCCTGGAACGCATCGAGGCGGCGCATGATCGCCTG CGCGAGATGGGAACGGCTGCCGGCATTTCCTACCACTTCGCAGCCATTAAGGTCGCACCCAATACGCTTGACGCGCATCG GGTGATCCGCTGGGCTGCGACGGCAGGCGAAGACGTGCAGAACAGGCTCGTGGAGCGCCTGTTCCGCCTCTATTTCGAAG AGGGACAGAACATCGGCGATCATGCCGTGCTGATCGAGGCCGCGCGGCAGGCGGACATGGACGCCTCGTTGGTCGAAACG CTGCTGCCCACCCAGGCGGACCGCGATGAGGTGAAGGCGGAGGTGGAGACGGCCCAGCGCATGGGCATCACCGGTGTCCC CTGTTTTTTGCTCGAGGGCCGATATGCGTTGATGGGGGCTCAGCCACCTAGAGCGCTCTCGGACGCGATCACGAAGGTGA GCGAGGCAAAGGAAAAGGGCGAGTTGGAGAACCCACAGGAATAG
Upstream 100 bases:
>100_bases GTGGATCGCCTATTGGAATTATCTGGAGCATCCGGAAGTATCGCCCCTGAATGGTTACGACCTCTCCACCTGGTGGCGCA AACCGAAATAGGAACACGTG
Downstream 100 bases:
>100_bases TTCACCGCGGGGGCAGCGGAAAATGAGCGATATCAGCAATGTGACATTGCGGGTTATGAAGGCGCGCGTGCCGGATACGG CTCGCGATATCGTCCGGATC
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRKAYMVQKFGSLERIEAAHDRL REMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQNRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVET LLPTQADRDEVKAEVETAQRMGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE
Sequences:
>Translated_227_residues MSDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRKAYMVQKFGSLERIEAAHDRL REMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQNRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVET LLPTQADRDEVKAEVETAQRMGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE >Mature_226_residues SDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRKAYMVQKFGSLERIEAAHDRLR EMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQNRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVETL LPTQADRDEVKAEVETAQRMGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 25293; Mature: 25162
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRK CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEECCCCCCCCCCCHH AYMVQKFGSLERIEAAHDRLREMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQ HHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHHH NRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVETLLPTQADRDEVKAEVETAQR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH MGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE CCCCCCCHHEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRK CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEECCCCCCCCCCCHH AYMVQKFGSLERIEAAHDRLREMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQ HHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHHH NRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVETLLPTQADRDEVKAEVETAQR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH MGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE CCCCCCCHHEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]