Click here to switch to the map view.

The map label for this gene is yccV [C]

Identifier: 110634049

GI number: 110634049

Start: 1815073

End: 1815405

Strand: Direct

Name: yccV [C]

Synonym: Meso_1697

Alternate gene names: 110634049

Gene position: 1815073-1815405 (Clockwise)

Preceding gene: 110634048

Following gene: 110634051

Centisome position: 41.14

GC content: 55.56

Gene sequence:

>333_bases
ATGCAGAAGATCAAAACGGCTAAATTTTCCATCGGTCAAGTGGTTCGCCACCGGCTCTTCCCCTTCCGCGGTGTCATCTT
CGACATCGATCCGGAATTCAACAATACCGAGGAATGGTACCAGGCCATTCCCGCGGAGGTCAGGCCGTCCAAGGATCAGC
CCTTCTACCATCTCCTCGCCGAGAACGAAGAGACGGAGTATGTGGCCTATGTCTCGGAGCAGAACCTGCTCGAAGATGAG
TCCGGAGAACCGGTGCGCCATCCCCAGCTTTTCGAGATGTTCATCCAGACGGGAGACGGCAAATACACACCCCGACTGCG
GCTGTGCCATTAA

Upstream 100 bases:

>100_bases
GCGCTTAGTCGGCTATCGCCGGAAGAAGGAACGCTCCGCCTCGATATCGGGATTGAATTGCAGTCAAAGCGACGCCAAAT
AAAGGGAAAGGCTTTGTGCA

Downstream 100 bases:

>100_bases
AATCTACGAACTAGGCGCCGGGGTTGAGCTTCGGCGCTTATCCCCGATCCGCAAAAGAAAAACAGGGCCTGCCGGCCCTG
TTTTCTTGATGGTCCGCCTG

Product: hemimethylated DNA binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQKIKTAKFSIGQVVRHRLFPFRGVIFDIDPEFNNTEEWYQAIPAEVRPSKDQPFYHLLAENEETEYVAYVSEQNLLEDE
SGEPVRHPQLFEMFIQTGDGKYTPRLRLCH

Sequences:

>Translated_110_residues
MQKIKTAKFSIGQVVRHRLFPFRGVIFDIDPEFNNTEEWYQAIPAEVRPSKDQPFYHLLAENEETEYVAYVSEQNLLEDE
SGEPVRHPQLFEMFIQTGDGKYTPRLRLCH
>Mature_110_residues
MQKIKTAKFSIGQVVRHRLFPFRGVIFDIDPEFNNTEEWYQAIPAEVRPSKDQPFYHLLAENEETEYVAYVSEQNLLEDE
SGEPVRHPQLFEMFIQTGDGKYTPRLRLCH

Specific function: Unknown

COG id: COG3785

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13003; Mature: 13003

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIKTAKFSIGQVVRHRLFPFRGVIFDIDPEFNNTEEWYQAIPAEVRPSKDQPFYHLLA
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEE
ENEETEYVAYVSEQNLLEDESGEPVRHPQLFEMFIQTGDGKYTPRLRLCH
CCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECC
>Mature Secondary Structure
MQKIKTAKFSIGQVVRHRLFPFRGVIFDIDPEFNNTEEWYQAIPAEVRPSKDQPFYHLLA
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEE
ENEETEYVAYVSEQNLLEDESGEPVRHPQLFEMFIQTGDGKYTPRLRLCH
CCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA