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The map label for this gene is ubiF [C]

Identifier: 110634048

GI number: 110634048

Start: 1813772

End: 1814980

Strand: Direct

Name: ubiF [C]

Synonym: Meso_1696

Alternate gene names: 110634048

Gene position: 1813772-1814980 (Clockwise)

Preceding gene: 110634038

Following gene: 110634049

Centisome position: 41.11

GC content: 65.43

Gene sequence:

>1209_bases
ATGAAAGAAAAGGTCATGGACGCGATACTTGTTGCGGGGACGGGCCCCACCGGCCTAGCCGCCGCATTGGCGCTTGCCCG
TATCGGCCGCAGCGTTGTGGTTGCCGGGCCGTTGCCTGCAGCCGATGATCGGCGCACGACTGCGCTGATGCGACCGGCGC
TCGCTTTCCTGGAAGGCCTCGGCCTGGCCGAAGATCTCCGCGATGTCGCCGCGCCGCTTGCCTCCATGCGCATCGTCGAT
GCGACGAGCCGGCTGATCCGCAGTCCGGCTGTCACCTTCCGTGCCGCCGAAATCGGCGAGGAATTCTTCGGTCTGAATAT
TCCAAACCTTGAACTCAATGCCGCGCTTGCTCGCAAGGTCCGCCAGGAGAAGAACATCGTCTGGAAAGAGGAAACGGTGG
CGAATTGGCGGCCGGCGGCCGACCAGGTCGAAGCACAGCTTTCGGGCGGAACGATCCTGCGCGCCGCCCTTGCTGTCGCT
GCCGACGGGCGCAACTCGCCCGCCCGGCAGGCCGCGGGCATCACAACCCGGCGCCGCGAGCTGCAGCAGAGCGCGATGGT
GCTCAATTTCACCCATTCGCGGCATCATGGCTTCACCTCGACCGAGTTCCACACGGAGCACGGCCCCTGCACGCAGGTGC
CGCTGCCGGGTGGTTTCCGCTCCAGTCTCGTCTGGGTGACGCGCCCATCGCAGGCCGAAGAATTGATGGCGCTGGATGAG
GCGGCATTATCGCAGCGGCTCGAAGAGCGCCAGCAGTCCTTCCTGGGCAAGGTGACGATCGAACCCGGCCGGCAGCTTTT
CCCCCTCGCCTCTGTGCTGCCGATGCGCTTTGGAGCGCAGCGCATCGCACTTGTCGGTGAGGCCGCCCATGTCTTTCCGC
CGATCACGGCGCAGGGGCTCAATCTCGGTCTGCGCGATGTGATGGATCTGGTGGAAGTTGTGCGCAGCAACCCGGAGGAT
CCCGGCTCGACCTCCGCCCTGGCCCAATATGATGCGCGCCGCCGGCCGGATGTGACAGCCCGATCGGGCGCCGTCAATTT
CATAAATGCCACCTTGCTGTCGGACATGCTTCCGGCCCAGCTCCTAAGGAGCGCCGGCCTTGGCCTTCTGGAAAGCCTGC
CGATCATGCGTGGCGTCTTCATGCGCGAGGGCATGTCGCCTGGCAGCGGATTCGCCGCGCTTCTACCCCGCCTTGCTCGT
CGCGCTTAG

Upstream 100 bases:

>100_bases
TCCGATTCCCTCACCCTTCGCTCGGCCTGCCGCCGCCCTTGTTTGATCTGCCTCGATCGACTGCTATATCTCCAGCGCTA
TCAGCCGGCACGAGGCCGCA

Downstream 100 bases:

>100_bases
TCGGCTATCGCCGGAAGAAGGAACGCTCCGCCTCGATATCGGGATTGAATTGCAGTCAAAGCGACGCCAAATAAAGGGAA
AGGCTTTGTGCAATGCAGAA

Product: 2-octaprenyl-6-methoxyphenyl hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKEKVMDAILVAGTGPTGLAAALALARIGRSVVVAGPLPAADDRRTTALMRPALAFLEGLGLAEDLRDVAAPLASMRIVD
ATSRLIRSPAVTFRAAEIGEEFFGLNIPNLELNAALARKVRQEKNIVWKEETVANWRPAADQVEAQLSGGTILRAALAVA
ADGRNSPARQAAGITTRRRELQQSAMVLNFTHSRHHGFTSTEFHTEHGPCTQVPLPGGFRSSLVWVTRPSQAEELMALDE
AALSQRLEERQQSFLGKVTIEPGRQLFPLASVLPMRFGAQRIALVGEAAHVFPPITAQGLNLGLRDVMDLVEVVRSNPED
PGSTSALAQYDARRRPDVTARSGAVNFINATLLSDMLPAQLLRSAGLGLLESLPIMRGVFMREGMSPGSGFAALLPRLAR
RA

Sequences:

>Translated_402_residues
MKEKVMDAILVAGTGPTGLAAALALARIGRSVVVAGPLPAADDRRTTALMRPALAFLEGLGLAEDLRDVAAPLASMRIVD
ATSRLIRSPAVTFRAAEIGEEFFGLNIPNLELNAALARKVRQEKNIVWKEETVANWRPAADQVEAQLSGGTILRAALAVA
ADGRNSPARQAAGITTRRRELQQSAMVLNFTHSRHHGFTSTEFHTEHGPCTQVPLPGGFRSSLVWVTRPSQAEELMALDE
AALSQRLEERQQSFLGKVTIEPGRQLFPLASVLPMRFGAQRIALVGEAAHVFPPITAQGLNLGLRDVMDLVEVVRSNPED
PGSTSALAQYDARRRPDVTARSGAVNFINATLLSDMLPAQLLRSAGLGLLESLPIMRGVFMREGMSPGSGFAALLPRLAR
RA
>Mature_402_residues
MKEKVMDAILVAGTGPTGLAAALALARIGRSVVVAGPLPAADDRRTTALMRPALAFLEGLGLAEDLRDVAAPLASMRIVD
ATSRLIRSPAVTFRAAEIGEEFFGLNIPNLELNAALARKVRQEKNIVWKEETVANWRPAADQVEAQLSGGTILRAALAVA
ADGRNSPARQAAGITTRRRELQQSAMVLNFTHSRHHGFTSTEFHTEHGPCTQVPLPGGFRSSLVWVTRPSQAEELMALDE
AALSQRLEERQQSFLGKVTIEPGRQLFPLASVLPMRFGAQRIALVGEAAHVFPPITAQGLNLGLRDVMDLVEVVRSNPED
PGSTSALAQYDARRRPDVTARSGAVNFINATLLSDMLPAQLLRSAGLGLLESLPIMRGVFMREGMSPGSGFAALLPRLAR
RA

Specific function: Oxygenase That Introduces The Hydroxyl Group At Carbon Five Of 2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol Resulting In The Formation Of 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Escherichia coli, GI1786883, Length=372, Percent_Identity=29.8387096774194, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1789274, Length=386, Percent_Identity=27.720207253886, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1789273, Length=394, Percent_Identity=28.4263959390863, Blast_Score=114, Evalue=1e-26,
Organism=Drosophila melanogaster, GI19920760, Length=286, Percent_Identity=27.972027972028, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 43189; Mature: 43189

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKVMDAILVAGTGPTGLAAALALARIGRSVVVAGPLPAADDRRTTALMRPALAFLEGL
CCHHHHHHHHEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHC
GLAEDLRDVAAPLASMRIVDATSRLIRSPAVTFRAAEIGEEFFGLNIPNLELNAALARKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RQEKNIVWKEETVANWRPAADQVEAQLSGGTILRAALAVAADGRNSPARQAAGITTRRRE
HHHHCCEECHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHH
LQQSAMVLNFTHSRHHGFTSTEFHTEHGPCTQVPLPGGFRSSLVWVTRPSQAEELMALDE
HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
AALSQRLEERQQSFLGKVTIEPGRQLFPLASVLPMRFGAQRIALVGEAAHVFPPITAQGL
HHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCCC
NLGLRDVMDLVEVVRSNPEDPGSTSALAQYDARRRPDVTARSGAVNFINATLLSDMLPAQ
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LLRSAGLGLLESLPIMRGVFMREGMSPGSGFAALLPRLARRA
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKEKVMDAILVAGTGPTGLAAALALARIGRSVVVAGPLPAADDRRTTALMRPALAFLEGL
CCHHHHHHHHEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHC
GLAEDLRDVAAPLASMRIVDATSRLIRSPAVTFRAAEIGEEFFGLNIPNLELNAALARKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RQEKNIVWKEETVANWRPAADQVEAQLSGGTILRAALAVAADGRNSPARQAAGITTRRRE
HHHHCCEECHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHH
LQQSAMVLNFTHSRHHGFTSTEFHTEHGPCTQVPLPGGFRSSLVWVTRPSQAEELMALDE
HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
AALSQRLEERQQSFLGKVTIEPGRQLFPLASVLPMRFGAQRIALVGEAAHVFPPITAQGL
HHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCCC
NLGLRDVMDLVEVVRSNPEDPGSTSALAQYDARRRPDVTARSGAVNFINATLLSDMLPAQ
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LLRSAGLGLLESLPIMRGVFMREGMSPGSGFAALLPRLARRA
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydroxylation [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]