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The map label for this gene is trkA [H]

Identifier: 110633967

GI number: 110633967

Start: 1738433

End: 1739809

Strand: Reverse

Name: trkA [H]

Synonym: Meso_1615

Alternate gene names: 110633967

Gene position: 1739809-1738433 (Counterclockwise)

Preceding gene: 110633968

Following gene: 110633966

Centisome position: 39.43

GC content: 60.57

Gene sequence:

>1377_bases
ATGAAAGTCATCATTTGCGGCGCGGGCCAAGTGGGCTATGGGATTGCCGAGCGCCTTGCGGCCGAGCAGAACGATGTCTC
CATCATCGATACCTCGCCGGATCTTGTCCGCTCCGTACGGGACACGCTGGACGTGCGCGGCTTCGTCGGCCATGGCGCCC
ATCCCGATATTCTGGCGGCCGCGGGCGCTCAGCAGGCGGACATGATTATTGCCGTGACCCTCTTTGACGAGGTGAACATG
GTCGCGTGCGAGGTCGCGCACGCGCTCTTCAATGTGCCGACGAAGATCGCCCGCATCCGTTCGCAGGCCTATCTTCAATC
GCACTACATGGATCTTTTCTCGCGAGAGAACCTGCCGATCGACGTCATCATCTCCCCGGAGCTGGAGGTGGGCGAGATGG
TATTGAGGCGTATCGCCCTGCCGGGTGCAACGGACGTGGTCTCCTTCGCCGAGGGGCATGTGGCGATGGTTGCAATCGAG
TGCCTCGAGGAATGCCCGGTTATCAACACACCGCTTTCGCAGCTAACGGAGCTGTTTCCGGATCTGCCATCCACCGTCGT
TGGCATCTCTCGCGGGGGGCACCTCTTCGTTCCCCGCTCGATCGATCAGCTGATGGCGGGTGATCTGGCCTATGTGGTCA
CCACCAAGGATCAGGTGCGGCGAACGCTCGGCCTTTTCGGTCACGATGAGAAGGAGGCAACGCGCATTGTAATTGCCGGT
GGCGGAAATATCGGCCTTTATGTTGCTCGTGCGCTCGAGCAGAAGCAGAGCCGGACCAAAGTGAAGCTGATCGAGAGCAA
TCATGCCCGGGCGGTGACCGTCGCCGACCAGCTGCGTCGCACTGTCGTGCTGAATGGCAGCGCTCTCGAACAAAAGCTGC
TGCTCGAAGCCGATATCGACCATGCCGACCTGATGGTCGCGCTGACGAACGACGATCAGGTGAACATTCTCTGCAGCGTG
ATTGCGAAGCGGCTGGGATGCCGGTCCAATCTTGTCCTGATCAACAACCCTACATATCACGACTTCGCGCGGACGCTTGG
CATCGATGCCCATGTGAACCCTCGGGCGGTGACGATCTCACGCGTGTTGCAGCATGTGCGGCGTGGACGCATCCGGGCCG
TCCACAATATCGATCGTGGAGCTGCGGAGGTGCTGGAGGCCGAGGCACTCGAGACATCGCCGCTTGTCGGGCCGCCGCTC
AACGAACAGGAACTGCCTGACGGGATGCGCATCGGCGGCGTTTATCGCGACGGCCAATTCATCAGGCCAAGCGGATCGCT
GCGGATAAAGCCCAAGGACCGCGTCGTCATCTTTGCGCTTGCCGATGCCGTAAGGCAGGTGGAGCAGCTGTTCCGCGTCA
GTTTGGAATTCTTTTGA

Upstream 100 bases:

>100_bases
CGGCAATATTTCTCGTACTGCCGAATTCATAGGGATGGAGCGTTCGGCGCTGCACAGGAAACTGAAGTCGCTGGGCGTCT
GACGGCCCTCGGAGAATGGA

Downstream 100 bases:

>100_bases
TCATCGGCTGTCTTTAAGGAGTCTGGAATGCCGCGCATCGCCTATGTGAATGGCCGCTATGTTCATCATGCGGACGCCGC
CGTTCACATTGAAGACCGGG

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAAAGAQQADMIIAVTLFDEVNM
VACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPIDVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIE
CLEECPVINTPLSQLTELFPDLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG
GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADIDHADLMVALTNDDQVNILCSV
IAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTISRVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPL
NEQELPDGMRIGGVYRDGQFIRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF

Sequences:

>Translated_458_residues
MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAAAGAQQADMIIAVTLFDEVNM
VACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPIDVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIE
CLEECPVINTPLSQLTELFPDLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG
GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADIDHADLMVALTNDDQVNILCSV
IAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTISRVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPL
NEQELPDGMRIGGVYRDGQFIRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF
>Mature_458_residues
MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAAAGAQQADMIIAVTLFDEVNM
VACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPIDVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIE
CLEECPVINTPLSQLTELFPDLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG
GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADIDHADLMVALTNDDQVNILCSV
IAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTISRVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPL
NEQELPDGMRIGGVYRDGQFIRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=463, Percent_Identity=41.036717062635, Blast_Score=325, Evalue=4e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 50034; Mature: 50034

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAA
CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCEEECCCCCCCHHHH
AGAQQADMIIAVTLFDEVNMVACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPI
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
DVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIECLEECPVINTPLSQLTELFP
EEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC
DLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG
CCCCHHEEECCCCEEEECCCHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEE
GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADID
CCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHCCEEEECCCHHHHHHHHCCCCC
HADLMVALTNDDQVNILCSVIAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTIS
CCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEHHH
RVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPLNEQELPDGMRIGGVYRDGQF
HHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEECCEEECCEE
IRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF
ECCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAA
CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCEEECCCCCCCHHHH
AGAQQADMIIAVTLFDEVNMVACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPI
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
DVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIECLEECPVINTPLSQLTELFP
EEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC
DLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG
CCCCHHEEECCCCEEEECCCHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEE
GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADID
CCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHCCEEEECCCHHHHHHHHCCCCC
HADLMVALTNDDQVNILCSVIAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTIS
CCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEHHH
RVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPLNEQELPDGMRIGGVYRDGQF
HHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEECCEEECCEE
IRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF
ECCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]