| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633962
Identifier: 110633962
GI number: 110633962
Start: 1733843
End: 1734709
Strand: Direct
Name: 110633962
Synonym: Meso_1610
Alternate gene names: NA
Gene position: 1733843-1734709 (Clockwise)
Preceding gene: 110633961
Following gene: 110633963
Centisome position: 39.29
GC content: 59.52
Gene sequence:
>867_bases ATGCGGATCGATGCCCATCACCATTTCTGGGATCCTCGCAAAAGGGACTACTACTGGATGCAGGGCCCGGAGATGGAGGT GATCCGGCGACCGATGGGGCCGGGGGATCTGCGTCCGCTGCTTGCCGCAGCCGGAATCTCCGGGACGGTGACTGTGCAGA CCGTCCCGGATCTCGGCGAAACGCGGGAGTTCCTCGCTGTGGCCGAGGAAACCGATTTCGTTTGCGGCGTCGTGGGATGG GCCGACCTGACGTCGCCCGAGCTGCCGGAGACGCTTGCCTCGCTTAAGGATGAGCCAGGCGGGAGATACCTCGTCGGCAT CCGCCATCAGGCTCACGACGAGGAGGATTCCGCATGGCTCACCCGCCCAGATGTTGTCAGCGGTATAAGGCGCGTCCATG AGGCTGGGCTTGCATATGATCTTCTCGTCAAAGAGCGTGAACTGCCCGCGGCTATCGCTTGCGCGGACTCGCTGCCCGCG GATGCACGGCTTGTCGTTGACCACATTGGTAAGCCACGGATTGCCGAATCCGCGCTCCAGCCCTGGAAGGATCTCATCTC CGACATCGCGAAACGTCCCAATGTGTGGTGCAAGATTTCCGGCATGGTGACAGAAGCGGACTGGGAAACCTGGTCCAAAG ACGATCTGCGACCTTACGTGGATCATGTCATTTCGTGTTTCGGATCTGAGCGCGTGATGTTTGGATCCGACTGGCCGGTT TGTCTTCTCGCCGCATCCTATGATGAGGTCGTGACTGCGACAGATGATCTTCTGTCGGACCTCACTGATCAGGAGCGGTT GATGGTATTCGGCGCCAACGCAGAAAAGTTTTATCGCCTCGACAGGTGTCGTGATGCCCGGAAATAG
Upstream 100 bases:
>100_bases GCTCAAGGCGGAAGGACTCTTGAGCCCGGATGCGCCCGTCCCGCACTAAGCGGTGATGGCGGCGCGCTCTATCGTTCAAT TCAAGGAAGGAACTTGCGCA
Downstream 100 bases:
>100_bases CCAACGATAATCGCCAATCCGAGCCCGGCCTCGGGATCCGCGGATCACCGCACGGTGCTAACTGATGCGCGGGCTCTCGT CATCACGGACTATGGGAGAA
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MRIDAHHHFWDPRKRDYYWMQGPEMEVIRRPMGPGDLRPLLAAAGISGTVTVQTVPDLGETREFLAVAEETDFVCGVVGW ADLTSPELPETLASLKDEPGGRYLVGIRHQAHDEEDSAWLTRPDVVSGIRRVHEAGLAYDLLVKERELPAAIACADSLPA DARLVVDHIGKPRIAESALQPWKDLISDIAKRPNVWCKISGMVTEADWETWSKDDLRPYVDHVISCFGSERVMFGSDWPV CLLAASYDEVVTATDDLLSDLTDQERLMVFGANAEKFYRLDRCRDARK
Sequences:
>Translated_288_residues MRIDAHHHFWDPRKRDYYWMQGPEMEVIRRPMGPGDLRPLLAAAGISGTVTVQTVPDLGETREFLAVAEETDFVCGVVGW ADLTSPELPETLASLKDEPGGRYLVGIRHQAHDEEDSAWLTRPDVVSGIRRVHEAGLAYDLLVKERELPAAIACADSLPA DARLVVDHIGKPRIAESALQPWKDLISDIAKRPNVWCKISGMVTEADWETWSKDDLRPYVDHVISCFGSERVMFGSDWPV CLLAASYDEVVTATDDLLSDLTDQERLMVFGANAEKFYRLDRCRDARK >Mature_288_residues MRIDAHHHFWDPRKRDYYWMQGPEMEVIRRPMGPGDLRPLLAAAGISGTVTVQTVPDLGETREFLAVAEETDFVCGVVGW ADLTSPELPETLASLKDEPGGRYLVGIRHQAHDEEDSAWLTRPDVVSGIRRVHEAGLAYDLLVKERELPAAIACADSLPA DARLVVDHIGKPRIAESALQPWKDLISDIAKRPNVWCKISGMVTEADWETWSKDDLRPYVDHVISCFGSERVMFGSDWPV CLLAASYDEVVTATDDLLSDLTDQERLMVFGANAEKFYRLDRCRDARK
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 32374; Mature: 32374
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDAHHHFWDPRKRDYYWMQGPEMEVIRRPMGPGDLRPLLAAAGISGTVTVQTVPDLGE CCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCH TREFLAVAEETDFVCGVVGWADLTSPELPETLASLKDEPGGRYLVGIRHQAHDEEDSAWL HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCC TRPDVVSGIRRVHEAGLAYDLLVKERELPAAIACADSLPADARLVVDHIGKPRIAESALQ CCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHH PWKDLISDIAKRPNVWCKISGMVTEADWETWSKDDLRPYVDHVISCFGSERVMFGSDWPV HHHHHHHHHHHCCCCEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCE CLLAASYDEVVTATDDLLSDLTDQERLMVFGANAEKFYRLDRCRDARK EEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCC >Mature Secondary Structure MRIDAHHHFWDPRKRDYYWMQGPEMEVIRRPMGPGDLRPLLAAAGISGTVTVQTVPDLGE CCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCH TREFLAVAEETDFVCGVVGWADLTSPELPETLASLKDEPGGRYLVGIRHQAHDEEDSAWL HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCC TRPDVVSGIRRVHEAGLAYDLLVKERELPAAIACADSLPADARLVVDHIGKPRIAESALQ CCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHH PWKDLISDIAKRPNVWCKISGMVTEADWETWSKDDLRPYVDHVISCFGSERVMFGSDWPV HHHHHHHHHHHCCCCEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCE CLLAASYDEVVTATDDLLSDLTDQERLMVFGANAEKFYRLDRCRDARK EEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]