| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633867
Identifier: 110633867
GI number: 110633867
Start: 1616032
End: 1617150
Strand: Direct
Name: 110633867
Synonym: Meso_1514
Alternate gene names: NA
Gene position: 1616032-1617150 (Clockwise)
Preceding gene: 110633866
Following gene: 110633868
Centisome position: 36.62
GC content: 57.02
Gene sequence:
>1119_bases ATGACGGGAATGTGCCGAATGCTGGGCCGGGTCTTCGCTGGCTTCGTGGCCTTGGCCTCGATGGCCGCATCGCACGCGGC CGCCGCTCCCGCTCCCGCTGGCGCGTATATCGAGAGTACAGCGACGGTCCAGTTCATAAATCCTCAAAACGGCGGCATGC AGGAAGTGGTGTTTACCAACACCGTCTATACGGAGGTCAATGCTGTCAAAGCCGTTCATGTTTTTCCTGCTCAGACGGTT TACCTTGCTCCAAGCATGTACGATCAGTTCGTATTTCACGTACGAAACACCGGCAATATCGAGATCAATCCAGTCATAAC TCTGGACCAGGTCCTCGGTGACGATTTCGACCTCGAGAACGTAAGCATGGTGATTGACACGAACTCCGACGGTTCCGCCG GCCCCAACGATCAAGCCCTCTCATCCGGCGGAAACATCACGCTTCCCGTCGATGCCGAAGCCTCCATTATCGTTACTTTC CGCAGTCCCGCCGCTGTTGCCGAAGGAGCAAGGTCCGAGCTTGAGCTTACTGCCCAAGATGATTCTGCCGTGAGTTCCGC GACAGGAACCGCCATCATTTCAAAAACCGGGCTTTCCCTCGAGAAATCGGCGAACTTGGATCAGGTCAAGCCTGGGGGAT TGTTGCGCTACAGGCTTCGCCTCAGCAACCGCGGTATCGTAGCGATGCCTGCCTACAGCTCGATCGACGGCGAGGCCGTC ATCATTGATGGCGCTCAGGCATCGGGCATTCTCGTGCGCGATGAGATGCCTCTTAACACACAGTTCTCTGCTTTCGTATC GCATAACAGCTTTCAAGCGCTCTACCACATCAGCGGGCGGCCCAAACACAGCTATACATCCACTGCGCCCCAGGACCTCG CGACGGTCGATGCAATCGCGTTCTTCTGGTCCGGAGATTATCCTCTGGACACCAACACGCTCGAGTTCGAGGTAAAGGTA GCCGACAATGCGACGGGCGGCAGCTTCATCTCGAACCGGGCTACACCTGGCAATTCACGCCAGACGGTCTCAAGGAACTG CCCTCAAATCTGCTGCGCACGCTCGTGGAAGGCGGCAATGGTCCGACCCTCTCTTTCCTCAACTCTGGCGGAGAGGTGA
Upstream 100 bases:
>100_bases GCAATCACACTAGGTCTCTCCGCGCGCTGATGTGCGCGTTCTTCCGCGATAGCCCGAGCAGGATGACCCTTGAGGAGAGA AGCTTTCGATGGAGATCGAC
Downstream 100 bases:
>100_bases TCACAAGCACGCGCCTGGATACTGAGGTTCGCCTGCGCTTTGACGACGCCGCCTGCAACATGTCAGCGGCCGTTGAGACT GTGCAGATCAACGTAATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTGMCRMLGRVFAGFVALASMAASHAAAAPAPAGAYIESTATVQFINPQNGGMQEVVFTNTVYTEVNAVKAVHVFPAQTV YLAPSMYDQFVFHVRNTGNIEINPVITLDQVLGDDFDLENVSMVIDTNSDGSAGPNDQALSSGGNITLPVDAEASIIVTF RSPAAVAEGARSELELTAQDDSAVSSATGTAIISKTGLSLEKSANLDQVKPGGLLRYRLRLSNRGIVAMPAYSSIDGEAV IIDGAQASGILVRDEMPLNTQFSAFVSHNSFQALYHISGRPKHSYTSTAPQDLATVDAIAFFWSGDYPLDTNTLEFEVKV ADNATGGSFISNRATPGNSRQTVSRNCPQICCARSWKAAMVRPSLSSTLAER
Sequences:
>Translated_372_residues MTGMCRMLGRVFAGFVALASMAASHAAAAPAPAGAYIESTATVQFINPQNGGMQEVVFTNTVYTEVNAVKAVHVFPAQTV YLAPSMYDQFVFHVRNTGNIEINPVITLDQVLGDDFDLENVSMVIDTNSDGSAGPNDQALSSGGNITLPVDAEASIIVTF RSPAAVAEGARSELELTAQDDSAVSSATGTAIISKTGLSLEKSANLDQVKPGGLLRYRLRLSNRGIVAMPAYSSIDGEAV IIDGAQASGILVRDEMPLNTQFSAFVSHNSFQALYHISGRPKHSYTSTAPQDLATVDAIAFFWSGDYPLDTNTLEFEVKV ADNATGGSFISNRATPGNSRQTVSRNCPQICCARSWKAAMVRPSLSSTLAER >Mature_371_residues TGMCRMLGRVFAGFVALASMAASHAAAAPAPAGAYIESTATVQFINPQNGGMQEVVFTNTVYTEVNAVKAVHVFPAQTVY LAPSMYDQFVFHVRNTGNIEINPVITLDQVLGDDFDLENVSMVIDTNSDGSAGPNDQALSSGGNITLPVDAEASIIVTFR SPAAVAEGARSELELTAQDDSAVSSATGTAIISKTGLSLEKSANLDQVKPGGLLRYRLRLSNRGIVAMPAYSSIDGEAVI IDGAQASGILVRDEMPLNTQFSAFVSHNSFQALYHISGRPKHSYTSTAPQDLATVDAIAFFWSGDYPLDTNTLEFEVKVA DNATGGSFISNRATPGNSRQTVSRNCPQICCARSWKAAMVRPSLSSTLAER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39416; Mature: 39284
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGMCRMLGRVFAGFVALASMAASHAAAAPAPAGAYIESTATVQFINPQNGGMQEVVFTN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCCCEEEEEEEE TVYTEVNAVKAVHVFPAQTVYLAPSMYDQFVFHVRNTGNIEINPVITLDQVLGDDFDLEN EEEEECCEEEEEEECCCCEEEECHHHHCEEEEEEECCCCEEEEEEEEEHHHHCCCCCCCC VSMVIDTNSDGSAGPNDQALSSGGNITLPVDAEASIIVTFRSPAAVAEGARSELELTAQD EEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEECCCHHHHCCCCCCEEEEECC DSAVSSATGTAIISKTGLSLEKSANLDQVKPGGLLRYRLRLSNRGIVAMPAYSSIDGEAV CCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCEE IIDGAQASGILVRDEMPLNTQFSAFVSHNSFQALYHISGRPKHSYTSTAPQDLATVDAIA EEECCCCCCEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHEEE FFWSGDYPLDTNTLEFEVKVADNATGGSFISNRATPGNSRQTVSRNCPQICCARSWKAAM EEECCCCCCCCCEEEEEEEEECCCCCCCHHCCCCCCCCCCCHHHCCCCHHHHCCCCCCEE VRPSLSSTLAER ECCCHHHHHHCC >Mature Secondary Structure TGMCRMLGRVFAGFVALASMAASHAAAAPAPAGAYIESTATVQFINPQNGGMQEVVFTN CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCCCEEEEEEEE TVYTEVNAVKAVHVFPAQTVYLAPSMYDQFVFHVRNTGNIEINPVITLDQVLGDDFDLEN EEEEECCEEEEEEECCCCEEEECHHHHCEEEEEEECCCCEEEEEEEEEHHHHCCCCCCCC VSMVIDTNSDGSAGPNDQALSSGGNITLPVDAEASIIVTFRSPAAVAEGARSELELTAQD EEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEECCCHHHHCCCCCCEEEEECC DSAVSSATGTAIISKTGLSLEKSANLDQVKPGGLLRYRLRLSNRGIVAMPAYSSIDGEAV CCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCEE IIDGAQASGILVRDEMPLNTQFSAFVSHNSFQALYHISGRPKHSYTSTAPQDLATVDAIA EEECCCCCCEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHEEE FFWSGDYPLDTNTLEFEVKVADNATGGSFISNRATPGNSRQTVSRNCPQICCARSWKAAM EEECCCCCCCCCEEEEEEEEECCCCCCCHHCCCCCCCCCCCHHHCCCCHHHHCCCCCCEE VRPSLSSTLAER ECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA