| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633866
Identifier: 110633866
GI number: 110633866
Start: 1612960
End: 1615878
Strand: Direct
Name: 110633866
Synonym: Meso_1513
Alternate gene names: NA
Gene position: 1612960-1615878 (Clockwise)
Preceding gene: 110633864
Following gene: 110633867
Centisome position: 36.55
GC content: 55.29
Gene sequence:
>2919_bases ATGCCCAATAAGTCCAATTTCTTCAACAGAACCCAGATGGGTGGAAATGGGCGAGGGATCGCCAGGATTTCCGGCTATCT GGCGGGTGCGGCGCTGGGGGTGGCCGCGCTCGCATCGCCCGCCCTGGCGGCAATGCCGCCCGCAGGATTTGCAATCGGCA ATAAGGCGCACGTCTCATTCGAGGTCGACGGTACACAGTTAAGCGCAGAGTCAAATCTCGTGCAGACGATCGTCAATACC GTATCGGGTGTCACCATCAGCGATGCCGCGCCGGTGGACGCTATTCCCGGCACTTTGGCTCCCGGCTTTTTCCATGTCAT AACGAACAAAGGAAACGGTCCCGAAGCATTCGACATAGTCGTAAGCCAATACACGGCAAACGTCGTCAACCCGGTTACTA TTTATCAGGCCGATTGCGCAACTGGCCTGCCCAGCACAACAGCACTGGTCGCTCCATTCAAAACCCCGGAGCTGCTGCCG GACAAATCCTTCTGTATTTCTGTGGTAGCGGGACTGATGAGTTCCGCCGTTGTTGGGACGCCGGAGAGCTTTCAAATTTC GGCGGTGGCAACCAACACAAATGCTTCCAACTACAATGCTGGTCCGCCGATCACGCCGAGAGATGATACCACCGATGTCA TCAATCCCACAAACGGGCCGGTTCTATCGCTTGTAAAAAGTTACGTGGACATCAATGGCGGCGATGTCGTGCCTGGCGAC AGGCTGCGCTTCAGGATAGCATATAGAAATACGGGGGCCACAGGCGCAGACGCACAAAATGTCAATATCACCGACAGCTT GGTGCCCGGGCTGATATATCAAACCGGCACTGGCATGTGGAACGGCACGGTTGCCCTTACGGAAAACTCCACAACGCCAC CCAGCAACGGTGTAACGCTCACGTACAATTACGCCACTCAGAACAGCCAGGTAAGTGCGCTGCTAAACACCGTTCGCGCC CAGACAAGCGGCTTCTTCGAATTCGAAGTGGTCGTTGCGCTGAATGTCGCCAGCGCAACATTGACCAACCAGGCTGAGGC AGTCTTCGATGGACATCCAGATCCGGTAGAGTCGAACGAGGTGCTTATCCCGATCAACGCTGTCGATACAGTCAGCGTGG TCTTGGCTGACAGCTCTCCAAATCCCGCGGTCGCACACACACAAGACCTGCCGGATAACAATCTGAGCGGTAATGATGCG TCGGCCACCGATGAAGAGACGAACCACACGAACGACCAGGTTGTACAACTGACCGCCATTGCTGAAGGCGCTCTTCTGGT ACAAGAGTTCGTTCTCACAAACACCTCCAGTACCGATCAGCTTTTTAATCTTACCTCTTCCCTGGACGGAGGACCGCGAT ACCCCAATCCCAGCGCAACACAGCCGCATCAGCCTCTGCCGCCAGGGACGCGGATCGTATTCGCCGACTACAATCTCTAC GACGACGACAATAGCGGCCAACCGGACGTTCTTGTCCCCGCCAACCAAACCATAAAGCTGCGGGTCTTCATCTATCTCCC GGCTGGCTATACGCGTGCGGCCGGCGCAGATCCTTGGGTCGGCCGGGTAACGGCAACCTCGAGATTCACTGACGCGGAAA ATCCTGATCCGAACAGACCCGACCTCACCAACAGTTCATGGATTGTAATTCGCGGCGATGTGCTTGCTTCGAGGGTCGAC CTCTTGAACAGGGATGGCACCAATCTCATCGCCGATGGCAGCAATACGACCAGGCCTGATGGAAGCCCGTGGCTCAATAT CAATGCAGATCCCGGCGCTAAAGTTGAATTCCCGCTCGTGGTGCAAAACGAAAGCTTATTGTCCGATAGTTTCCAGCTTT CGTTCAGCGCGACCAACGCTCCATTTGTGCCTGGAAGCACTCCTCTTGGCTATACCGTTCGTCTTCTTGACGCCAGTAGG AATCCCCTGAGTAACGGGAACACCGGTCTGATAGGCCCCAACTCCTCCAGAGACTTCATTGCAGAAGTCACAGTTCCTCA ATCCGCGAGACCTGGAACTGTCAATTTCTACTTCCGAGTACAAGGCGTGAGAAATCCTGCCCTTATGGACACGAAGCTCG ACGCAGTGACGGTCAATAGGGTTGGAAATCTTGCGATCAAGCAAGATCAGCCTGGGGCCACAGCTCCTGGAATGGCATGG GTCTTCAGTCACGTCATGTCCAACTTGGGCAATGTCACCGTTGTCGACAGTACAATTAGCTATGATCCGCCATTCCCGAC CTTTGATGAGGCACTTTATGCGGACCTCAACGGCAATGGCATCCTGGATACGGCTGAATTGAGCGCACAGCCAATCACGG GCGTACGTGACATCTGGAACCGGCTTCCAGCGAATTCACCCCTGAAGCAGATTGATCCAGCTCGTGGCCTTACTGAATTT TTTGACCCGGGAGAGTCGATCATCCTGTTCGGTCGGGTTACACCTCCGCCCGGCGCACTTCCCACGACCACCGAGATCGG AACCGTCTATGTCAACGTAAGCCTTGAAGACATGAGCGGTAACATTATTCAAGACGTTCAGCCCAGCAATAACAGGGCGG ACGAGGCCTTGACGGTGGTCGATTCACCGATCGTTCCGATCAAGGAGCAGGCACTTGACAGGGGTTGCAACGGGACGGTT GACGTGCCGTTTACGATGGGCAAGCTCCAGGGTGACCCCGGCGACTGCATCCAGTATAGGGTAACTGTCAACAATAACGG CGGAAACCTCGTGAACCAGGTCACGATTGACGACAAGGTTCCGCTGTATACGACGCTCTCCACGGCGGCCCAGGTCACTC CGGGCCAGATCGCCGCGCAGCCCGCAATAGGAGCTACGGGCAACATAATTGCCAATGTCGGTACACTGAACGGAAATTCA AATGCGGTCCTGACGTTCACCGTCAAGATCGACCAATAA
Upstream 100 bases:
>100_bases TTAATAAAAAGTTAATCTTACAGACTAATTTGTGCATAACTGGTGAAAAGCCTCTTGATCCTCCCGGGTTCAATCAAAAG GAGGTGAAAGGTGATTCGCC
Downstream 100 bases:
>100_bases GCGGTACCGAGTTTGCGGGCGGGGAGAAGCTTCCCGCCCGCATTTGGGAACAAGCAATCACACTAGGTCTCTCCGCGCGC TGATGTGCGCGTTCTTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 972; Mature: 971
Protein sequence:
>972_residues MPNKSNFFNRTQMGGNGRGIARISGYLAGAALGVAALASPALAAMPPAGFAIGNKAHVSFEVDGTQLSAESNLVQTIVNT VSGVTISDAAPVDAIPGTLAPGFFHVITNKGNGPEAFDIVVSQYTANVVNPVTIYQADCATGLPSTTALVAPFKTPELLP DKSFCISVVAGLMSSAVVGTPESFQISAVATNTNASNYNAGPPITPRDDTTDVINPTNGPVLSLVKSYVDINGGDVVPGD RLRFRIAYRNTGATGADAQNVNITDSLVPGLIYQTGTGMWNGTVALTENSTTPPSNGVTLTYNYATQNSQVSALLNTVRA QTSGFFEFEVVVALNVASATLTNQAEAVFDGHPDPVESNEVLIPINAVDTVSVVLADSSPNPAVAHTQDLPDNNLSGNDA SATDEETNHTNDQVVQLTAIAEGALLVQEFVLTNTSSTDQLFNLTSSLDGGPRYPNPSATQPHQPLPPGTRIVFADYNLY DDDNSGQPDVLVPANQTIKLRVFIYLPAGYTRAAGADPWVGRVTATSRFTDAENPDPNRPDLTNSSWIVIRGDVLASRVD LLNRDGTNLIADGSNTTRPDGSPWLNINADPGAKVEFPLVVQNESLLSDSFQLSFSATNAPFVPGSTPLGYTVRLLDASR NPLSNGNTGLIGPNSSRDFIAEVTVPQSARPGTVNFYFRVQGVRNPALMDTKLDAVTVNRVGNLAIKQDQPGATAPGMAW VFSHVMSNLGNVTVVDSTISYDPPFPTFDEALYADLNGNGILDTAELSAQPITGVRDIWNRLPANSPLKQIDPARGLTEF FDPGESIILFGRVTPPPGALPTTTEIGTVYVNVSLEDMSGNIIQDVQPSNNRADEALTVVDSPIVPIKEQALDRGCNGTV DVPFTMGKLQGDPGDCIQYRVTVNNNGGNLVNQVTIDDKVPLYTTLSTAAQVTPGQIAAQPAIGATGNIIANVGTLNGNS NAVLTFTVKIDQ
Sequences:
>Translated_972_residues MPNKSNFFNRTQMGGNGRGIARISGYLAGAALGVAALASPALAAMPPAGFAIGNKAHVSFEVDGTQLSAESNLVQTIVNT VSGVTISDAAPVDAIPGTLAPGFFHVITNKGNGPEAFDIVVSQYTANVVNPVTIYQADCATGLPSTTALVAPFKTPELLP DKSFCISVVAGLMSSAVVGTPESFQISAVATNTNASNYNAGPPITPRDDTTDVINPTNGPVLSLVKSYVDINGGDVVPGD RLRFRIAYRNTGATGADAQNVNITDSLVPGLIYQTGTGMWNGTVALTENSTTPPSNGVTLTYNYATQNSQVSALLNTVRA QTSGFFEFEVVVALNVASATLTNQAEAVFDGHPDPVESNEVLIPINAVDTVSVVLADSSPNPAVAHTQDLPDNNLSGNDA SATDEETNHTNDQVVQLTAIAEGALLVQEFVLTNTSSTDQLFNLTSSLDGGPRYPNPSATQPHQPLPPGTRIVFADYNLY DDDNSGQPDVLVPANQTIKLRVFIYLPAGYTRAAGADPWVGRVTATSRFTDAENPDPNRPDLTNSSWIVIRGDVLASRVD LLNRDGTNLIADGSNTTRPDGSPWLNINADPGAKVEFPLVVQNESLLSDSFQLSFSATNAPFVPGSTPLGYTVRLLDASR NPLSNGNTGLIGPNSSRDFIAEVTVPQSARPGTVNFYFRVQGVRNPALMDTKLDAVTVNRVGNLAIKQDQPGATAPGMAW VFSHVMSNLGNVTVVDSTISYDPPFPTFDEALYADLNGNGILDTAELSAQPITGVRDIWNRLPANSPLKQIDPARGLTEF FDPGESIILFGRVTPPPGALPTTTEIGTVYVNVSLEDMSGNIIQDVQPSNNRADEALTVVDSPIVPIKEQALDRGCNGTV DVPFTMGKLQGDPGDCIQYRVTVNNNGGNLVNQVTIDDKVPLYTTLSTAAQVTPGQIAAQPAIGATGNIIANVGTLNGNS NAVLTFTVKIDQ >Mature_971_residues PNKSNFFNRTQMGGNGRGIARISGYLAGAALGVAALASPALAAMPPAGFAIGNKAHVSFEVDGTQLSAESNLVQTIVNTV SGVTISDAAPVDAIPGTLAPGFFHVITNKGNGPEAFDIVVSQYTANVVNPVTIYQADCATGLPSTTALVAPFKTPELLPD KSFCISVVAGLMSSAVVGTPESFQISAVATNTNASNYNAGPPITPRDDTTDVINPTNGPVLSLVKSYVDINGGDVVPGDR LRFRIAYRNTGATGADAQNVNITDSLVPGLIYQTGTGMWNGTVALTENSTTPPSNGVTLTYNYATQNSQVSALLNTVRAQ TSGFFEFEVVVALNVASATLTNQAEAVFDGHPDPVESNEVLIPINAVDTVSVVLADSSPNPAVAHTQDLPDNNLSGNDAS ATDEETNHTNDQVVQLTAIAEGALLVQEFVLTNTSSTDQLFNLTSSLDGGPRYPNPSATQPHQPLPPGTRIVFADYNLYD DDNSGQPDVLVPANQTIKLRVFIYLPAGYTRAAGADPWVGRVTATSRFTDAENPDPNRPDLTNSSWIVIRGDVLASRVDL LNRDGTNLIADGSNTTRPDGSPWLNINADPGAKVEFPLVVQNESLLSDSFQLSFSATNAPFVPGSTPLGYTVRLLDASRN PLSNGNTGLIGPNSSRDFIAEVTVPQSARPGTVNFYFRVQGVRNPALMDTKLDAVTVNRVGNLAIKQDQPGATAPGMAWV FSHVMSNLGNVTVVDSTISYDPPFPTFDEALYADLNGNGILDTAELSAQPITGVRDIWNRLPANSPLKQIDPARGLTEFF DPGESIILFGRVTPPPGALPTTTEIGTVYVNVSLEDMSGNIIQDVQPSNNRADEALTVVDSPIVPIKEQALDRGCNGTVD VPFTMGKLQGDPGDCIQYRVTVNNNGGNLVNQVTIDDKVPLYTTLSTAAQVTPGQIAAQPAIGATGNIIANVGTLNGNSN AVLTFTVKIDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102145; Mature: 102013
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00018 EF_HAND_1 ; PS00850 GLY_RADICAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKSNFFNRTQMGGNGRGIARISGYLAGAALGVAALASPALAAMPPAGFAIGNKAHVSF CCCCCCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECCEEEEEE EVDGTQLSAESNLVQTIVNTVSGVTISDAAPVDAIPGTLAPGFFHVITNKGNGPEAFDIV EECCCEECCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE VSQYTANVVNPVTIYQADCATGLPSTTALVAPFKTPELLPDKSFCISVVAGLMSSAVVGT EEHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC PESFQISAVATNTNASNYNAGPPITPRDDTTDVINPTNGPVLSLVKSYVDINGGDVVPGD CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC RLRFRIAYRNTGATGADAQNVNITDSLVPGLIYQTGTGMWNGTVALTENSTTPPSNGVTL CEEEEEEEECCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCCCEEE TYNYATQNSQVSALLNTVRAQTSGFFEFEVVVALNVASATLTNQAEAVFDGHPDPVESNE EEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHCCCCCEEECCCCCCCCCCC VLIPINAVDTVSVVLADSSPNPAVAHTQDLPDNNLSGNDASATDEETNHTNDQVVQLTAI EEEEECCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE AEGALLVQEFVLTNTSSTDQLFNLTSSLDGGPRYPNPSATQPHQPLPPGTRIVFADYNLY CCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEE DDDNSGQPDVLVPANQTIKLRVFIYLPAGYTRAAGADPWVGRVTATSRFTDAENPDPNRP CCCCCCCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC DLTNSSWIVIRGDVLASRVDLLNRDGTNLIADGSNTTRPDGSPWLNINADPGAKVEFPLV CCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEE VQNESLLSDSFQLSFSATNAPFVPGSTPLGYTVRLLDASRNPLSNGNTGLIGPNSSRDFI ECCCHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCEE AEVTVPQSARPGTVNFYFRVQGVRNPALMDTKLDAVTVNRVGNLAIKQDQPGATAPGMAW EEEECCCCCCCCEEEEEEEEEECCCCCEECCCCCEEEEECCCCEEEECCCCCCCCCHHHH VFSHVMSNLGNVTVVDSTISYDPPFPTFDEALYADLNGNGILDTAELSAQPITGVRDIWN HHHHHHHCCCCEEEEECEECCCCCCCCCCHHEEEECCCCCEEEHHHCCCCCCCHHHHHHH RLPANSPLKQIDPARGLTEFFDPGESIILFGRVTPPPGALPTTTEIGTVYVNVSLEDMSG HCCCCCCHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCC NIIQDVQPSNNRADEALTVVDSPIVPIKEQALDRGCNGTVDVPFTMGKLQGDPGDCIQYR CEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEECCEEEEEECCCCCCEEEEE VTVNNNGGNLVNQVTIDDKVPLYTTLSTAAQVTPGQIAAQPAIGATGNIIANVGTLNGNS EEEECCCCCEEEEEEECCCCCEEEECCHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCC NAVLTFTVKIDQ CEEEEEEEEECC >Mature Secondary Structure PNKSNFFNRTQMGGNGRGIARISGYLAGAALGVAALASPALAAMPPAGFAIGNKAHVSF CCCCCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECCEEEEEE EVDGTQLSAESNLVQTIVNTVSGVTISDAAPVDAIPGTLAPGFFHVITNKGNGPEAFDIV EECCCEECCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE VSQYTANVVNPVTIYQADCATGLPSTTALVAPFKTPELLPDKSFCISVVAGLMSSAVVGT EEHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC PESFQISAVATNTNASNYNAGPPITPRDDTTDVINPTNGPVLSLVKSYVDINGGDVVPGD CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC RLRFRIAYRNTGATGADAQNVNITDSLVPGLIYQTGTGMWNGTVALTENSTTPPSNGVTL CEEEEEEEECCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCCCEEE TYNYATQNSQVSALLNTVRAQTSGFFEFEVVVALNVASATLTNQAEAVFDGHPDPVESNE EEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHCCCCCEEECCCCCCCCCCC VLIPINAVDTVSVVLADSSPNPAVAHTQDLPDNNLSGNDASATDEETNHTNDQVVQLTAI EEEEECCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE AEGALLVQEFVLTNTSSTDQLFNLTSSLDGGPRYPNPSATQPHQPLPPGTRIVFADYNLY CCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEE DDDNSGQPDVLVPANQTIKLRVFIYLPAGYTRAAGADPWVGRVTATSRFTDAENPDPNRP CCCCCCCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC DLTNSSWIVIRGDVLASRVDLLNRDGTNLIADGSNTTRPDGSPWLNINADPGAKVEFPLV CCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEE VQNESLLSDSFQLSFSATNAPFVPGSTPLGYTVRLLDASRNPLSNGNTGLIGPNSSRDFI ECCCHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCEE AEVTVPQSARPGTVNFYFRVQGVRNPALMDTKLDAVTVNRVGNLAIKQDQPGATAPGMAW EEEECCCCCCCCEEEEEEEEEECCCCCEECCCCCEEEEECCCCEEEECCCCCCCCCHHHH VFSHVMSNLGNVTVVDSTISYDPPFPTFDEALYADLNGNGILDTAELSAQPITGVRDIWN HHHHHHHCCCCEEEEECEECCCCCCCCCCHHEEEECCCCCEEEHHHCCCCCCCHHHHHHH RLPANSPLKQIDPARGLTEFFDPGESIILFGRVTPPPGALPTTTEIGTVYVNVSLEDMSG HCCCCCCHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCC NIIQDVQPSNNRADEALTVVDSPIVPIKEQALDRGCNGTVDVPFTMGKLQGDPGDCIQYR CEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEECCEEEEEECCCCCCEEEEE VTVNNNGGNLVNQVTIDDKVPLYTTLSTAAQVTPGQIAAQPAIGATGNIIANVGTLNGNS EEEECCCCCEEEEEEECCCCCEEEECCHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCC NAVLTFTVKIDQ CEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA