Click here to switch to the map view.

The map label for this gene is 110633778

Identifier: 110633778

GI number: 110633778

Start: 1523251

End: 1524504

Strand: Reverse

Name: 110633778

Synonym: Meso_1425

Alternate gene names: NA

Gene position: 1524504-1523251 (Counterclockwise)

Preceding gene: 110633781

Following gene: 110633771

Centisome position: 34.55

GC content: 64.35

Gene sequence:

>1254_bases
ATGGCAAAGTGTCTCGCGCTGATGCTCGGACAGGATCTCGCGGAAGGTAATATGGAACGAAACGCGATAAAGCTTATCGG
CAGCCTGATCCTCATGGCTGCGGCCGTTCTTACCGCCGGCTGGCTGGTTGAACCATCACAGCCAGGCTCGTTCTACAGGA
TCGAGGAGGAGATAAAGGGGGCGCCGGGCGATATTCTTCGCGTCGCACCGTTTCCCGGCCCCGTTGCCAACGGGGCGCGG
GCCTGGCGCGTGCTTTATGTCTCGACCGGGCTTTCGGGCGAGCCGATTGCCGTTTCCGGCGTGATTGCCGCGCCGGAGGA
AAAGGCTCCCGCCGAGGGTAGGCCCGTGGTCGCCTGGGCCCATGGAACCACGGGGGTGACCAGCCGTTGCGCGCCCTCGC
TGCGCGCGGACTTCTTCCAGCATGTTCCCGGCGTAACCGAGTTGCTCAGGAAGGGGTATGTGGTGGCGGCGACGGATTAT
CCCGGCCTCGGGACGCCCTCCCCTCATCCTTACCTTGTCGGCGAGAGCGAGGGGCGCGCAGTGCTCGACGCGGTTCGCGC
AGCGGCCAAAGTGGAGAGCGCCGGGACGTCTAAGCGGTTTGCCGCCTGGGGCCATTCGCAGGGTGGACATGCCGCGCTCT
TTGCCGGGCAGATCGCCGCGGATTATGCGCCGGAGCTCGAAATTGCCGGCGTGGCGGTCGCAGCACCTGCGACAAACCTC
GCGGAGCTTGTGGACGATGATCTTCCGAGCAAGGCCGGAAAGGTGCTGACCGCACTTGCCATGTGGTCCTGGAACAAGGT
CTTTGACGCTCCCCTGTCGCCTCTGCTCGATCCGGAAGCCATAGCGGCCATCGACCGCATCGCTGCCGATTGCATGGAGG
ATGTCCTTCAGGGTCTCGTTCTCGCGGAGCGGGAAAAGGCGATCGACGGGAACTTCATCCACGGTGATCTGACCCAGACC
GAGCCCTGGAAGAGACTGCTCGAAGAAAACACGCCGGATGCCGGCAAGGCCGACGCCCCGCTTTTCATGGCGCAGGGCAC
CGCGGACACAATTGTGCGGCCCCAGGTGACGCGCGATTTCGCCGAGCGCGCATGCCGAAGCGGCAGGCCGGTCCGTTTCA
TTGCCGGACCGGGGCTTGATCACATGGGAATTCTGGCCGGCGCCACAGCCGATGTCGTAGAATGGATTTCAGATCGCCTC
GCTGGCAGCCCCGCGCCTAGCGATTGCGCGGACCTGCCGACCGTACGTTATTGA

Upstream 100 bases:

>100_bases
TTCTCCATCGGCTTTGATCTAACCTGCACCAAAAGCGTCCGCCAGAGGTTAGCGCGGGCTGTTATGAAGGAAACCTTCCA
CTTTGGTATTTCCCGAGGGG

Downstream 100 bases:

>100_bases
ATCTACGCATCGTTCTTTCCGAAAACCGTTTCCGGTTTTCGGGCCGGTGCGCTTAGCTGGCCGCCACCTGTTCGAATGGC
ACCGGTATTTCCGATCTTCC

Product: secretory lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MAKCLALMLGQDLAEGNMERNAIKLIGSLILMAAAVLTAGWLVEPSQPGSFYRIEEEIKGAPGDILRVAPFPGPVANGAR
AWRVLYVSTGLSGEPIAVSGVIAAPEEKAPAEGRPVVAWAHGTTGVTSRCAPSLRADFFQHVPGVTELLRKGYVVAATDY
PGLGTPSPHPYLVGESEGRAVLDAVRAAAKVESAGTSKRFAAWGHSQGGHAALFAGQIAADYAPELEIAGVAVAAPATNL
AELVDDDLPSKAGKVLTALAMWSWNKVFDAPLSPLLDPEAIAAIDRIAADCMEDVLQGLVLAEREKAIDGNFIHGDLTQT
EPWKRLLEENTPDAGKADAPLFMAQGTADTIVRPQVTRDFAERACRSGRPVRFIAGPGLDHMGILAGATADVVEWISDRL
AGSPAPSDCADLPTVRY

Sequences:

>Translated_417_residues
MAKCLALMLGQDLAEGNMERNAIKLIGSLILMAAAVLTAGWLVEPSQPGSFYRIEEEIKGAPGDILRVAPFPGPVANGAR
AWRVLYVSTGLSGEPIAVSGVIAAPEEKAPAEGRPVVAWAHGTTGVTSRCAPSLRADFFQHVPGVTELLRKGYVVAATDY
PGLGTPSPHPYLVGESEGRAVLDAVRAAAKVESAGTSKRFAAWGHSQGGHAALFAGQIAADYAPELEIAGVAVAAPATNL
AELVDDDLPSKAGKVLTALAMWSWNKVFDAPLSPLLDPEAIAAIDRIAADCMEDVLQGLVLAEREKAIDGNFIHGDLTQT
EPWKRLLEENTPDAGKADAPLFMAQGTADTIVRPQVTRDFAERACRSGRPVRFIAGPGLDHMGILAGATADVVEWISDRL
AGSPAPSDCADLPTVRY
>Mature_416_residues
AKCLALMLGQDLAEGNMERNAIKLIGSLILMAAAVLTAGWLVEPSQPGSFYRIEEEIKGAPGDILRVAPFPGPVANGARA
WRVLYVSTGLSGEPIAVSGVIAAPEEKAPAEGRPVVAWAHGTTGVTSRCAPSLRADFFQHVPGVTELLRKGYVVAATDYP
GLGTPSPHPYLVGESEGRAVLDAVRAAAKVESAGTSKRFAAWGHSQGGHAALFAGQIAADYAPELEIAGVAVAAPATNLA
ELVDDDLPSKAGKVLTALAMWSWNKVFDAPLSPLLDPEAIAAIDRIAADCMEDVLQGLVLAEREKAIDGNFIHGDLTQTE
PWKRLLEENTPDAGKADAPLFMAQGTADTIVRPQVTRDFAERACRSGRPVRFIAGPGLDHMGILAGATADVVEWISDRLA
GSPAPSDCADLPTVRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005152 [H]

Pfam domain/function: PF03583 LIP [H]

EC number: NA

Molecular weight: Translated: 43777; Mature: 43646

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKCLALMLGQDLAEGNMERNAIKLIGSLILMAAAVLTAGWLVEPSQPGSFYRIEEEIKG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEHHHHCC
APGDILRVAPFPGPVANGARAWRVLYVSTGLSGEPIAVSGVIAAPEEKAPAEGRPVVAWA
CCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEE
HGTTGVTSRCAPSLRADFFQHVPGVTELLRKGYVVAATDYPGLGTPSPHPYLVGESEGRA
CCCCCCHHHCCHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCCHH
VLDAVRAAAKVESAGTSKRFAAWGHSQGGHAALFAGQIAADYAPELEIAGVAVAAPATNL
HHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECHHHHCCCCCCEECCEEEECCCHHH
AELVDDDLPSKAGKVLTALAMWSWNKVFDAPLSPLLDPEAIAAIDRIAADCMEDVLQGLV
HHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAEREKAIDGNFIHGDLTQTEPWKRLLEENTPDAGKADAPLFMAQGTADTIVRPQVTRDF
HHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHH
AERACRSGRPVRFIAGPGLDHMGILAGATADVVEWISDRLAGSPAPSDCADLPTVRY
HHHHHHCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
AKCLALMLGQDLAEGNMERNAIKLIGSLILMAAAVLTAGWLVEPSQPGSFYRIEEEIKG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEHHHHCC
APGDILRVAPFPGPVANGARAWRVLYVSTGLSGEPIAVSGVIAAPEEKAPAEGRPVVAWA
CCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEE
HGTTGVTSRCAPSLRADFFQHVPGVTELLRKGYVVAATDYPGLGTPSPHPYLVGESEGRA
CCCCCCHHHCCHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCCHH
VLDAVRAAAKVESAGTSKRFAAWGHSQGGHAALFAGQIAADYAPELEIAGVAVAAPATNL
HHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECHHHHCCCCCCEECCEEEECCCHHH
AELVDDDLPSKAGKVLTALAMWSWNKVFDAPLSPLLDPEAIAAIDRIAADCMEDVLQGLV
HHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAEREKAIDGNFIHGDLTQTEPWKRLLEENTPDAGKADAPLFMAQGTADTIVRPQVTRDF
HHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHH
AERACRSGRPVRFIAGPGLDHMGILAGATADVVEWISDRLAGSPAPSDCADLPTVRY
HHHHHHCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]