| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is ilvA [H]
Identifier: 110633774
GI number: 110633774
Start: 1518507
End: 1519763
Strand: Direct
Name: ilvA [H]
Synonym: Meso_1421
Alternate gene names: 110633774
Gene position: 1518507-1519763 (Clockwise)
Preceding gene: 110633773
Following gene: 110633775
Centisome position: 34.41
GC content: 59.9
Gene sequence:
>1257_bases ATGAGCGCTTTCATAGGGCGCGTCGGGAGAGCAGCGCAGGCGCTGCGCGACCTGTTTCCCGAGACGCCGCTCCAGAAAAA CGATTATCTCTCCAGGAAGACGGGCGCGAGGGTCTTCCTCAAGCGAGAAGACCTGACCCCCGTGCGCTCTTACAAGCTGC GCGGTGCGTTCAACTTCATGCGCAAGGCAATCGCGGCCGGTGCGGGGGCGGATGGCTTCGTCTGTGCCTCGGCGGGCAAT CACGCCCAGGGCTTCGCGTACGCCTGTCGGCACTTCTCCCGCAAGGGTGTGGTGTTCATGCCGGTTACAACGCCACAGCA GAAGATCGAAAAGACGATGCTTTTCGGCGGAGAATGGATCGAGGTTCGGCTCGTGGGCGATTTCTTCGAGGATTGCTATG AGGCGGCGAAGGAGTTTGCCGATACTAACCATGCGCTGATGGTCCCGCCTTTCGACCACAGCGATATCATCGAAGGACAG GCGACGGTTGCCCAGGAACTGGCCGACCAGTTGGGAAAGGGTCTGGAGGGCGCGACGATCATCCTGCCGGTGGGCGGCGG CGGCCTTGCTGCCGGAATCACTGCCTTCCTGCAGGAAAGCGGTATCGGCGCGCGATATGCCTTTGCCGAACCGGCCGGCG CGCCAAGTCTTGCGCTCAGCCTTTCGGCCGGCAAAAGAGTAAAGCTGCCGCAGGTGGACAATTTCGTGGACGGCGCTGCT GTTGCCGAGATCGGGCGCGAGCCGTTCAAGCGTCTTAAGAACTTTTCTGCTCAAGATGTTCATAAAATACCGGAAAATCG CCTTTGCTCGACGATCCTCGAAATGCTGAACATAGAAGGTGTGGTGCTCGAGCCTGCAGGGGCGCTGGCGATTGACGCCC TCAAGGATTTTTCACGGCGGGAGATCCGTGGGAGCACGATCGTCGCTGTCGTTTCCGGTGGCAACTTTGATTTCGAGCGG CTGCCGGATGTGAAGGAGCGCTCGCTGCGTTTCGAGGGCTTGAAGAAGTACTTCATCTTCCGTTTTCCCCAACGCCCCGG CGCGCTGCGGGATTTCCTCGATCTGCTGGGGCCGGACGACGATATCACCCGCTTCGAATATCTGAAAAAATCCGCGCGCA ATTTCGGCTCGGTGCTGATCGGCATCGAGACCAAGGACCCGCGGAACTTTGCCCTGCTGGGGCGTCGTTTTGACGAGGCC GGCTGGGGGTATCAGGACATCACCCAAGACGAGACGATCGCGAATCTCCTCATATGA
Upstream 100 bases:
>100_bases CCTGATCCTGCCTTTGGCGGAAGAAATGCAAAGTGGCCTCAGCCTGTTCGATATGCAATAGCATCGTGATTGCCGAGCTT TCCGGCCTGAGGAGAATTGT
Downstream 100 bases:
>100_bases CGGCGGGAACGGCCTATATCGTGCTCTTTCGCGGCGTGGGCGGCGCCACGCAGCTTCCTGTGGCGCGGCTGCGGGAGGTG CTTCCGCAGGCGGGCTTCCG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSAFIGRVGRAAQALRDLFPETPLQKNDYLSRKTGARVFLKREDLTPVRSYKLRGAFNFMRKAIAAGAGADGFVCASAGN HAQGFAYACRHFSRKGVVFMPVTTPQQKIEKTMLFGGEWIEVRLVGDFFEDCYEAAKEFADTNHALMVPPFDHSDIIEGQ ATVAQELADQLGKGLEGATIILPVGGGGLAAGITAFLQESGIGARYAFAEPAGAPSLALSLSAGKRVKLPQVDNFVDGAA VAEIGREPFKRLKNFSAQDVHKIPENRLCSTILEMLNIEGVVLEPAGALAIDALKDFSRREIRGSTIVAVVSGGNFDFER LPDVKERSLRFEGLKKYFIFRFPQRPGALRDFLDLLGPDDDITRFEYLKKSARNFGSVLIGIETKDPRNFALLGRRFDEA GWGYQDITQDETIANLLI
Sequences:
>Translated_418_residues MSAFIGRVGRAAQALRDLFPETPLQKNDYLSRKTGARVFLKREDLTPVRSYKLRGAFNFMRKAIAAGAGADGFVCASAGN HAQGFAYACRHFSRKGVVFMPVTTPQQKIEKTMLFGGEWIEVRLVGDFFEDCYEAAKEFADTNHALMVPPFDHSDIIEGQ ATVAQELADQLGKGLEGATIILPVGGGGLAAGITAFLQESGIGARYAFAEPAGAPSLALSLSAGKRVKLPQVDNFVDGAA VAEIGREPFKRLKNFSAQDVHKIPENRLCSTILEMLNIEGVVLEPAGALAIDALKDFSRREIRGSTIVAVVSGGNFDFER LPDVKERSLRFEGLKKYFIFRFPQRPGALRDFLDLLGPDDDITRFEYLKKSARNFGSVLIGIETKDPRNFALLGRRFDEA GWGYQDITQDETIANLLI >Mature_417_residues SAFIGRVGRAAQALRDLFPETPLQKNDYLSRKTGARVFLKREDLTPVRSYKLRGAFNFMRKAIAAGAGADGFVCASAGNH AQGFAYACRHFSRKGVVFMPVTTPQQKIEKTMLFGGEWIEVRLVGDFFEDCYEAAKEFADTNHALMVPPFDHSDIIEGQA TVAQELADQLGKGLEGATIILPVGGGGLAAGITAFLQESGIGARYAFAEPAGAPSLALSLSAGKRVKLPQVDNFVDGAAV AEIGREPFKRLKNFSAQDVHKIPENRLCSTILEMLNIEGVVLEPAGALAIDALKDFSRREIRGSTIVAVVSGGNFDFERL PDVKERSLRFEGLKKYFIFRFPQRPGALRDFLDLLGPDDDITRFEYLKKSARNFGSVLIGIETKDPRNFALLGRRFDEAG WGYQDITQDETIANLLI
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI33469958, Length=323, Percent_Identity=31.2693498452012, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI11345492, Length=317, Percent_Identity=26.813880126183, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI19923959, Length=307, Percent_Identity=26.7100977198697, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1790207, Length=392, Percent_Identity=32.1428571428571, Blast_Score=164, Evalue=9e-42, Organism=Escherichia coli, GI1789505, Length=315, Percent_Identity=28.2539682539683, Blast_Score=106, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71991565, Length=345, Percent_Identity=28.9855072463768, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17537387, Length=404, Percent_Identity=26.980198019802, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17508781, Length=288, Percent_Identity=26.3888888888889, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6320930, Length=369, Percent_Identity=32.7913279132791, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6322631, Length=315, Percent_Identity=26.3492063492064, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6319788, Length=291, Percent_Identity=26.4604810996564, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI21355833, Length=349, Percent_Identity=25.5014326647564, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 45850; Mature: 45719
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFIGRVGRAAQALRDLFPETPLQKNDYLSRKTGARVFLKREDLTPVRSYKLRGAFNFM CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH RKAIAAGAGADGFVCASAGNHAQGFAYACRHFSRKGVVFMPVTTPQQKIEKTMLFGGEWI HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEE EVRLVGDFFEDCYEAAKEFADTNHALMVPPFDHSDIIEGQATVAQELADQLGKGLEGATI EEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHCCCCCCCEE ILPVGGGGLAAGITAFLQESGIGARYAFAEPAGAPSLALSLSAGKRVKLPQVDNFVDGAA EEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCEECCCCCCCHHCHHH VAEIGREPFKRLKNFSAQDVHKIPENRLCSTILEMLNIEGVVLEPAGALAIDALKDFSRR HHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH EIRGSTIVAVVSGGNFDFERLPDVKERSLRFEGLKKYFIFRFPQRPGALRDFLDLLGPDD HCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCC DITRFEYLKKSARNFGSVLIGIETKDPRNFALLGRRFDEAGWGYQDITQDETIANLLI CHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHCC >Mature Secondary Structure SAFIGRVGRAAQALRDLFPETPLQKNDYLSRKTGARVFLKREDLTPVRSYKLRGAFNFM CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH RKAIAAGAGADGFVCASAGNHAQGFAYACRHFSRKGVVFMPVTTPQQKIEKTMLFGGEWI HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEE EVRLVGDFFEDCYEAAKEFADTNHALMVPPFDHSDIIEGQATVAQELADQLGKGLEGATI EEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHCCCCCCCEE ILPVGGGGLAAGITAFLQESGIGARYAFAEPAGAPSLALSLSAGKRVKLPQVDNFVDGAA EEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCEECCCCCCCHHCHHH VAEIGREPFKRLKNFSAQDVHKIPENRLCSTILEMLNIEGVVLEPAGALAIDALKDFSRR HHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH EIRGSTIVAVVSGGNFDFERLPDVKERSLRFEGLKKYFIFRFPQRPGALRDFLDLLGPDD HCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCC DITRFEYLKKSARNFGSVLIGIETKDPRNFALLGRRFDEAGWGYQDITQDETIANLLI CHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]