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The map label for this gene is fdxB [H]

Identifier: 110633763

GI number: 110633763

Start: 1510423

End: 1510743

Strand: Direct

Name: fdxB [H]

Synonym: Meso_1410

Alternate gene names: 110633763

Gene position: 1510423-1510743 (Clockwise)

Preceding gene: 110633762

Following gene: 110633765

Centisome position: 34.23

GC content: 59.19

Gene sequence:

>321_bases
ATGCCAAGGCTGAAATTCATCGCGTTCGACGGCACGGAATTCGACATCCAGGCCGATAACGGCTCAACGTTGATGCAAAA
CGCCGTCAGAAACGGCGTGCCGGGCATAGAAGCCGAATGCGGAGGCGCCTGTGCATGTGCAACCTGCCATGTCTATGTGG
ACGAGGCATGGGCGGAGATCGTCGGCCCACCGGAGCCCATGGAAGAGGACATGCTCGATTTTGCCTATGACGTGCGGCCG
ACCTCACGGCTGTCATGCCAGGTTCGGGTGAGGGAAGAGCTGGATGGCCTTACGGTAAGGATACCTGAGCGTCAGGGCTG
A

Upstream 100 bases:

>100_bases
AGCATACGGAAACTGGTGGAGCAGGTTGACTCGTCCTGCGTAGTGATTATTCCCGGCTGTTGTTCCTCCGCAGCAGCTCA
ACCCCTCCAGGTTTTCGCTT

Downstream 100 bases:

>100_bases
CCTCATCAGGCCCGCCACTGCCAGCGCTGCGGCAACTAACGGCCCTGCTGCCGCATTTGAAGGGCCTCGATCTGTTGCAG
GCGATAGCGCAGCAGGCGCA

Product: ferredoxin

Products: NA

Alternate protein names: FdII [H]

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MPRLKFIAFDGTEFDIQADNGSTLMQNAVRNGVPGIEAECGGACACATCHVYVDEAWAEIVGPPEPMEEDMLDFAYDVRP
TSRLSCQVRVREELDGLTVRIPERQG

Sequences:

>Translated_106_residues
MPRLKFIAFDGTEFDIQADNGSTLMQNAVRNGVPGIEAECGGACACATCHVYVDEAWAEIVGPPEPMEEDMLDFAYDVRP
TSRLSCQVRVREELDGLTVRIPERQG
>Mature_105_residues
PRLKFIAFDGTEFDIQADNGSTLMQNAVRNGVPGIEAECGGACACATCHVYVDEAWAEIVGPPEPMEEDMLDFAYDVRPT
SRLSCQVRVREELDGLTVRIPERQG

Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=98, Percent_Identity=36.734693877551, Blast_Score=70, Evalue=4e-13,
Organism=Homo sapiens, GI4758352, Length=102, Percent_Identity=35.2941176470588, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788874, Length=87, Percent_Identity=44.8275862068966, Blast_Score=69, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17544202, Length=101, Percent_Identity=42.5742574257426, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325004, Length=101, Percent_Identity=38.6138613861386, Blast_Score=84, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24661503, Length=100, Percent_Identity=31, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11678; Mature: 11547

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLKFIAFDGTEFDIQADNGSTLMQNAVRNGVPGIEAECGGACACATCHVYVDEAWAEI
CCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCHHHHH
VGPPEPMEEDMLDFAYDVRPTSRLSCQVRVREELDGLTVRIPERQG
CCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCC
>Mature Secondary Structure 
PRLKFIAFDGTEFDIQADNGSTLMQNAVRNGVPGIEAECGGACACATCHVYVDEAWAEI
CCEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCHHHHH
VGPPEPMEEDMLDFAYDVRPTSRLSCQVRVREELDGLTVRIPERQG
CCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751304; 11259647 [H]