| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633751
Identifier: 110633751
GI number: 110633751
Start: 1493885
End: 1494361
Strand: Direct
Name: 110633751
Synonym: Meso_1398
Alternate gene names: NA
Gene position: 1493885-1494361 (Clockwise)
Preceding gene: 110633750
Following gene: 110633753
Centisome position: 33.86
GC content: 60.8
Gene sequence:
>477_bases GTGATTTTCAAGAACGCTTCTCGACACCTGCTCATGGCCACCTGCCTGTGCGCCGGTGTTGCCATTGCATCCCCGGTGCT TGCACAAGCGCCTTCCCAACCCTCCGCGCCCGCGGCAACCCAGGCTCCTGCGCCGGAGGAAGCTCAGCCATCCGCGCCAG CGGCAACTCAACCTGCCGCACCTGCGCCAAATCAACCTTCCCAAGCCACATCGGTCACTGACGAGAAGCTGGAGACCTTT GTGGTGGCTCTCGCGGAGGTCGAACGGATCAAGCAGGAATATTCTCAGCGGCTGCAGACGGCCGGCTCAGAGGCGGAGCA GCAGCAGATTCAGAACGAGGCCGGTCAGAAAATGCTCCAGGCCGTCGAAGGCAAAGGGATATCGGTCGACGAATACAATC AGATCATTCAGACGGCGCAAACGGACCCTGCCTTGGCGGAGCGGCTTTCCAAGGCTATGGGCCAGTCCAACCAATAG
Upstream 100 bases:
>100_bases TTGAAATCGCCCGTACCGAGAACGCACGGGCAGCAGCGTTGCCGGCGTGGGGAACCTTGCACGGCCCGTTGAACGAAAAC GCCAAGGAAGGATCAGAAAC
Downstream 100 bases:
>100_bases CTGGCGCGGTGACGCTCGCCCGTGTGCGCTCACGCGGGCAAACCATTCTCCCTCGCCCGTCAAACAAGGGCGAGGGCTGC TCATGGAGGCGAGCAACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MIFKNASRHLLMATCLCAGVAIASPVLAQAPSQPSAPAATQAPAPEEAQPSAPAATQPAAPAPNQPSQATSVTDEKLETF VVALAEVERIKQEYSQRLQTAGSEAEQQQIQNEAGQKMLQAVEGKGISVDEYNQIIQTAQTDPALAERLSKAMGQSNQ
Sequences:
>Translated_158_residues MIFKNASRHLLMATCLCAGVAIASPVLAQAPSQPSAPAATQAPAPEEAQPSAPAATQPAAPAPNQPSQATSVTDEKLETF VVALAEVERIKQEYSQRLQTAGSEAEQQQIQNEAGQKMLQAVEGKGISVDEYNQIIQTAQTDPALAERLSKAMGQSNQ >Mature_158_residues MIFKNASRHLLMATCLCAGVAIASPVLAQAPSQPSAPAATQAPAPEEAQPSAPAATQPAAPAPNQPSQATSVTDEKLETF VVALAEVERIKQEYSQRLQTAGSEAEQQQIQNEAGQKMLQAVEGKGISVDEYNQIIQTAQTDPALAERLSKAMGQSNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16595; Mature: 16595
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKNASRHLLMATCLCAGVAIASPVLAQAPSQPSAPAATQAPAPEEAQPSAPAATQPAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPNQPSQATSVTDEKLETFVVALAEVERIKQEYSQRLQTAGSEAEQQQIQNEAGQKMLQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AVEGKGISVDEYNQIIQTAQTDPALAERLSKAMGQSNQ HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MIFKNASRHLLMATCLCAGVAIASPVLAQAPSQPSAPAATQAPAPEEAQPSAPAATQPAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPNQPSQATSVTDEKLETFVVALAEVERIKQEYSQRLQTAGSEAEQQQIQNEAGQKMLQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AVEGKGISVDEYNQIIQTAQTDPALAERLSKAMGQSNQ HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA