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The map label for this gene is 110633727

Identifier: 110633727

GI number: 110633727

Start: 1468374

End: 1469654

Strand: Direct

Name: 110633727

Synonym: Meso_1374

Alternate gene names: NA

Gene position: 1468374-1469654 (Clockwise)

Preceding gene: 110633726

Following gene: 110633733

Centisome position: 33.28

GC content: 58.31

Gene sequence:

>1281_bases
GTGCCACCTAAAGCAGGAATAATGTTCCGTTTCCTCCTCTGGCGCAGACACTACGACCCGGTCCTCCTCTCCATTGCTGT
CGCCTGCCTCGTGGTGAAGGTAAAGCTGGATGTGCTGCTCTTCGGATTTTTTGCGGGTATCGGCATTTATCTCATTACTG
GCATGCACCGCTCGATCCGTTCCATAGATCCGGTCTATGCGACGGGCGCCTGCCTCTATGCCGGCTGTGCAATAGTAATC
GGTCTGATCCACGGCAACTTGCCCGAGGAGATTCGCTGGATCGGTTATCCCCTTTACCTGTTGCTCGGCATCACGCTTTT
TCCCGGTGTCGTATTGATAAAGGACCCGCTGCGTCAGATCGTGCTCGGCGCAAGGGCAGGCCTGATTCTCGCTCTGGTTG
TAGGAGCGTTCGAGATGGTGGGAGGGTTGGTGCGCATCGGCCTGGGCGGCAATGCGGCCAATACAGCCTTCGTCATTGTG
GTCGTGGGCGTGCTCTCGCGCATGCCGGTGCGAAATCCGCCCCGGTTTCTTCCCAATTCCCGGCTTTGGTTTTACCTCGC
TGCCCTAGCGGTGATTATGACGGGCACGCGATCCGTGCTTCCCGTCTTCGCCCTGGGCCTCCTCTTCGATCTTTTTGCGA
TGCGTCGCCAGCTGGCGAATGGCGCGCTTCGCATGAGTCTGAGAAGCGCAGCCGTGGTCATGCTGGTCTTTTTTCTTGGG
CTGGGCGCGATCGGCTACGAACTTGCCGGGTCGATCGCCAATCGGGTCGACTACACCTTCGCCGAGATCGATTCCACGAT
GCAGAACCCCGGCGAAGAGGACGCCCCCCTTACTGGCCTCGAAATTCGACTAACGCTGTGGCAAAAGGCGATTGAAGTTA
TTCGCAGTCATCCGCTTATCGGCAGCGGCGGCGATGCGAGCATGCGGGAAATCATACGATCTACCCCGCAGGAGCAGCGA
GCCACCTTTTCCCCCTATATTCATGTGCACAATTTCGTTCTGGACGAGCTGCGCGTGCGCGGGATCATCGGCCTCGTCGT
GATGCTGGGATTCTTCCTGGCAGTTTGTTGGAGACTTTGGGCGAGCGGCCTGCCGGAAATTCGCGAGGCGACGGTGCTGT
TCTTCGCCTCGCTCCTGACCTATGGCGCATTGCACGGATTGCTCTTGGCGGACCGGAACATGGCCTTGATCGCCATCTTC
CTCGTATCGCTGCTTCTGTACCTCAAGAAGGAGGCCTTCTGGCGGAACGTGCGGCGGCCTTTTCAGCTGAAAACAGCGTA
A

Upstream 100 bases:

>100_bases
GCTATGATATCCACACCAACTTCGAGCGGTGTGAATAGACATCAACTTAGAGTAGAAATAATTCCGGCGTATATATCTTT
TGGCAAGGGAAGGAAGCACG

Downstream 100 bases:

>100_bases
AGCGTCCGCCGCAAATAGTCCTGGCCGCGAAAGAGAGCGGTCGGGATGCGCATATAGAATGGAAATTTGGTCTTCTTATA
GCCGCCGATGGTGGAGCCTG

Product: O-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MPPKAGIMFRFLLWRRHYDPVLLSIAVACLVVKVKLDVLLFGFFAGIGIYLITGMHRSIRSIDPVYATGACLYAGCAIVI
GLIHGNLPEEIRWIGYPLYLLLGITLFPGVVLIKDPLRQIVLGARAGLILALVVGAFEMVGGLVRIGLGGNAANTAFVIV
VVGVLSRMPVRNPPRFLPNSRLWFYLAALAVIMTGTRSVLPVFALGLLFDLFAMRRQLANGALRMSLRSAAVVMLVFFLG
LGAIGYELAGSIANRVDYTFAEIDSTMQNPGEEDAPLTGLEIRLTLWQKAIEVIRSHPLIGSGGDASMREIIRSTPQEQR
ATFSPYIHVHNFVLDELRVRGIIGLVVMLGFFLAVCWRLWASGLPEIREATVLFFASLLTYGALHGLLLADRNMALIAIF
LVSLLLYLKKEAFWRNVRRPFQLKTA

Sequences:

>Translated_426_residues
MPPKAGIMFRFLLWRRHYDPVLLSIAVACLVVKVKLDVLLFGFFAGIGIYLITGMHRSIRSIDPVYATGACLYAGCAIVI
GLIHGNLPEEIRWIGYPLYLLLGITLFPGVVLIKDPLRQIVLGARAGLILALVVGAFEMVGGLVRIGLGGNAANTAFVIV
VVGVLSRMPVRNPPRFLPNSRLWFYLAALAVIMTGTRSVLPVFALGLLFDLFAMRRQLANGALRMSLRSAAVVMLVFFLG
LGAIGYELAGSIANRVDYTFAEIDSTMQNPGEEDAPLTGLEIRLTLWQKAIEVIRSHPLIGSGGDASMREIIRSTPQEQR
ATFSPYIHVHNFVLDELRVRGIIGLVVMLGFFLAVCWRLWASGLPEIREATVLFFASLLTYGALHGLLLADRNMALIAIF
LVSLLLYLKKEAFWRNVRRPFQLKTA
>Mature_425_residues
PPKAGIMFRFLLWRRHYDPVLLSIAVACLVVKVKLDVLLFGFFAGIGIYLITGMHRSIRSIDPVYATGACLYAGCAIVIG
LIHGNLPEEIRWIGYPLYLLLGITLFPGVVLIKDPLRQIVLGARAGLILALVVGAFEMVGGLVRIGLGGNAANTAFVIVV
VGVLSRMPVRNPPRFLPNSRLWFYLAALAVIMTGTRSVLPVFALGLLFDLFAMRRQLANGALRMSLRSAAVVMLVFFLGL
GAIGYELAGSIANRVDYTFAEIDSTMQNPGEEDAPLTGLEIRLTLWQKAIEVIRSHPLIGSGGDASMREIIRSTPQEQRA
TFSPYIHVHNFVLDELRVRGIIGLVVMLGFFLAVCWRLWASGLPEIREATVLFFASLLTYGALHGLLLADRNMALIAIFL
VSLLLYLKKEAFWRNVRRPFQLKTA

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46962; Mature: 46831

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
PPKAGIMFRFLLWRRHYDPVLLSIAVACLVVKVKLDVLLFGFFAGIGIYLITGMHRSIR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIDPVYATGACLYAGCAIVIGLIHGNLPEEIRWIGYPLYLLLGITLFPGVVLIKDPLRQI
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VLGARAGLILALVVGAFEMVGGLVRIGLGGNAANTAFVIVVVGVLSRMPVRNPPRFLPNS
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
RLWFYLAALAVIMTGTRSVLPVFALGLLFDLFAMRRQLANGALRMSLRSAAVVMLVFFLG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAIGYELAGSIANRVDYTFAEIDSTMQNPGEEDAPLTGLEIRLTLWQKAIEVIRSHPLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
GSGGDASMREIIRSTPQEQRATFSPYIHVHNFVLDELRVRGIIGLVVMLGFFLAVCWRLW
CCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGLPEIREATVLFFASLLTYGALHGLLLADRNMALIAIFLVSLLLYLKKEAFWRNVRRP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
FQLKTA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA