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The map label for this gene is 110633681

Identifier: 110633681

GI number: 110633681

Start: 1420272

End: 1420559

Strand: Direct

Name: 110633681

Synonym: Meso_1328

Alternate gene names: NA

Gene position: 1420272-1420559 (Clockwise)

Preceding gene: 110633678

Following gene: 110633682

Centisome position: 32.19

GC content: 54.86

Gene sequence:

>288_bases
ATGACCGGCTATGTTTATATAATCGCGAGCCAAAAGCGCGGCACGATCTATATCGGCGTGACGAATGATCTTGGCCGCCG
CATCATCGAGCACAAGGATGGAAAGGGATCGCGCTTCACTAGCCGGTATGGTGTTGCACGGCTCGTTTGGTACGAAGAGC
ATTTCGATATGCGCGACGCCATTCAGCGGGAGAAATCGCTGAAACGCTGGCCGCGGCAATGGAAAATCGATCTGATCGAG
AAAAACAATCCCGAGTGGCAGGAACTGCTGCGCGGGTGGGGGTGGTGA

Upstream 100 bases:

>100_bases
GCCGCGCTGGCCGGCCTCCTCGCGGGTAAGCGCCATCCGAAACGCGCCGCCCGCGCTCGGGTGGTTGCGCGTTGCCTCGG
CACTCGATTAGCCTTCTGAC

Downstream 100 bases:

>100_bases
CGCCTGCGCCGTGTGGCGTGCTGGTTCCAGCTTCCCATTTTCGTCATCCTCGGGCTAGCGCGTGTGGGCGCAACCCTGCG
TTCGTCATCCTCGGGCTTGA

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MTGYVYIIASQKRGTIYIGVTNDLGRRIIEHKDGKGSRFTSRYGVARLVWYEEHFDMRDAIQREKSLKRWPRQWKIDLIE
KNNPEWQELLRGWGW

Sequences:

>Translated_95_residues
MTGYVYIIASQKRGTIYIGVTNDLGRRIIEHKDGKGSRFTSRYGVARLVWYEEHFDMRDAIQREKSLKRWPRQWKIDLIE
KNNPEWQELLRGWGW
>Mature_94_residues
TGYVYIIASQKRGTIYIGVTNDLGRRIIEHKDGKGSRFTSRYGVARLVWYEEHFDMRDAIQREKSLKRWPRQWKIDLIEK
NNPEWQELLRGWGW

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11499; Mature: 11368

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGYVYIIASQKRGTIYIGVTNDLGRRIIEHKDGKGSRFTSRYGVARLVWYEEHFDMRDA
CCEEEEEEEECCCCEEEEEECCHHHHHHHHCCCCCCCCCHHCCCEEEEEEECCCCCHHHH
IQREKSLKRWPRQWKIDLIEKNNPEWQELLRGWGW
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCC
>Mature Secondary Structure 
TGYVYIIASQKRGTIYIGVTNDLGRRIIEHKDGKGSRFTSRYGVARLVWYEEHFDMRDA
CEEEEEEEECCCCEEEEEECCHHHHHHHHCCCCCCCCCHHCCCEEEEEEECCCCCHHHH
IQREKSLKRWPRQWKIDLIEKNNPEWQELLRGWGW
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA