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The map label for this gene is dppC [H]

Identifier: 110633664

GI number: 110633664

Start: 1402091

End: 1402954

Strand: Reverse

Name: dppC [H]

Synonym: Meso_1311

Alternate gene names: 110633664

Gene position: 1402954-1402091 (Counterclockwise)

Preceding gene: 110633665

Following gene: 110633663

Centisome position: 31.8

GC content: 66.09

Gene sequence:

>864_bases
ATGAGCCTCGATCCGGTTCCCGCGCCTCAGCGCCGACGGATGCGCGGCGCGCTCTCCAACCGCTCGTTCCTGGTGGGGCT
CGTCATCACCGGAGCGGTGATCCTGATGGCGCTCGTCTCCTTTTTCTGGACGCCCTACGACATCACGCGGCTTGCGGTCG
CGAACAGGCTTTTGGGGCTTTCCCCGGAACATCCCTTCGGCACTGATCATATGGGGCGCGACATTTTCTCCATGATCATG
ATCGGGGCGCGCAATTCCATCGCCGTCGCGATTGTGGCGGTGGGCATTGGGATGGGCGTCGGCGTACCGCTCGGTACCTG
GGCGGCCGCCCGCGGGGGTTGGGCGGATGAGGTGCTCATGCGCGCGAACGACGTGATGTTCGCGTTTCCCGCGCTGCTTT
CGGCGGTGATGATCACGGCCATCTTCGGTCCGGGAGCTGTAAACGCGATCATCGCCATCGGCATCTTCAACGTGCCCGTC
TTTGCCCGCGTTGCGCGCGCGGGGGCACTGGCGCTGTGGCCGCGCGAATTCATCCTGGCCGCCCGCGCCTCCGGCAAGGG
CAAGGTGCTGATAACGCTGGAGCACATCCTGCCCAATATCGCCGGCCTTCTTCTGGTGCAGGGAACGATCCAATTCGCGC
TCGCCATTCTGGCGGAGGCGGGGCTGTCCTATCTGGGCCTCGGCGCCCAGCCGCCCATGCCCTCCTGGGGGCGCATGCTC
TTCGACGCGCAAACGCGGATTGCCGTGGCGCCGCATCTGGCGCTTTTTCCGGGACTCGCCATCGTCGTCACCGTGCTCGG
GCTGAACCTGCTGGGCGACGGGCTTCGCGACGTTCTCGACCCGCGGCTGAGGCAAGAGCGATGA

Upstream 100 bases:

>100_bases
TGGAAGGCGTCGTGATGCTGCTCGTCGCGAGCGTCATCCTCATCAACCTTGTCGTCGACATTTGCTACACGATCGTCGAT
CCCCGCCTGAGGGGCGGCCG

Downstream 100 bases:

>100_bases
GCCTGCTCCAGATCGAAAAGCTGACGCTCTCGATCGGCGGATCGCAGATCCTCAGGAGCATCGACATTTCGATAGAGCCG
GGCGAAATCATGGGCCTGGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MSLDPVPAPQRRRMRGALSNRSFLVGLVITGAVILMALVSFFWTPYDITRLAVANRLLGLSPEHPFGTDHMGRDIFSMIM
IGARNSIAVAIVAVGIGMGVGVPLGTWAAARGGWADEVLMRANDVMFAFPALLSAVMITAIFGPGAVNAIIAIGIFNVPV
FARVARAGALALWPREFILAARASGKGKVLITLEHILPNIAGLLLVQGTIQFALAILAEAGLSYLGLGAQPPMPSWGRML
FDAQTRIAVAPHLALFPGLAIVVTVLGLNLLGDGLRDVLDPRLRQER

Sequences:

>Translated_287_residues
MSLDPVPAPQRRRMRGALSNRSFLVGLVITGAVILMALVSFFWTPYDITRLAVANRLLGLSPEHPFGTDHMGRDIFSMIM
IGARNSIAVAIVAVGIGMGVGVPLGTWAAARGGWADEVLMRANDVMFAFPALLSAVMITAIFGPGAVNAIIAIGIFNVPV
FARVARAGALALWPREFILAARASGKGKVLITLEHILPNIAGLLLVQGTIQFALAILAEAGLSYLGLGAQPPMPSWGRML
FDAQTRIAVAPHLALFPGLAIVVTVLGLNLLGDGLRDVLDPRLRQER
>Mature_286_residues
SLDPVPAPQRRRMRGALSNRSFLVGLVITGAVILMALVSFFWTPYDITRLAVANRLLGLSPEHPFGTDHMGRDIFSMIMI
GARNSIAVAIVAVGIGMGVGVPLGTWAAARGGWADEVLMRANDVMFAFPALLSAVMITAIFGPGAVNAIIAIGIFNVPVF
ARVARAGALALWPREFILAARASGKGKVLITLEHILPNIAGLLLVQGTIQFALAILAEAGLSYLGLGAQPPMPSWGRMLF
DAQTRIAVAPHLALFPGLAIVVTVLGLNLLGDGLRDVLDPRLRQER

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=256, Percent_Identity=45.703125, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=37.1647509578544, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI1789889, Length=249, Percent_Identity=36.9477911646586, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1789964, Length=227, Percent_Identity=44.0528634361233, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1787498, Length=275, Percent_Identity=36, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787549, Length=276, Percent_Identity=34.4202898550725, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788505, Length=222, Percent_Identity=25.6756756756757, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30440; Mature: 30309

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDPVPAPQRRRMRGALSNRSFLVGLVITGAVILMALVSFFWTPYDITRLAVANRLLGL
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SPEHPFGTDHMGRDIFSMIMIGARNSIAVAIVAVGIGMGVGVPLGTWAAARGGWADEVLM
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHH
RANDVMFAFPALLSAVMITAIFGPGAVNAIIAIGIFNVPVFARVARAGALALWPREFILA
HHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHH
ARASGKGKVLITLEHILPNIAGLLLVQGTIQFALAILAEAGLSYLGLGAQPPMPSWGRML
HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHH
FDAQTRIAVAPHLALFPGLAIVVTVLGLNLLGDGLRDVLDPRLRQER
HHCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
>Mature Secondary Structure 
SLDPVPAPQRRRMRGALSNRSFLVGLVITGAVILMALVSFFWTPYDITRLAVANRLLGL
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SPEHPFGTDHMGRDIFSMIMIGARNSIAVAIVAVGIGMGVGVPLGTWAAARGGWADEVLM
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHH
RANDVMFAFPALLSAVMITAIFGPGAVNAIIAIGIFNVPVFARVARAGALALWPREFILA
HHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHH
ARASGKGKVLITLEHILPNIAGLLLVQGTIQFALAILAEAGLSYLGLGAQPPMPSWGRML
HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHH
FDAQTRIAVAPHLALFPGLAIVVTVLGLNLLGDGLRDVLDPRLRQER
HHCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]