| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is lon [H]
Identifier: 110633524
GI number: 110633524
Start: 1280249
End: 1282663
Strand: Direct
Name: lon [H]
Synonym: Meso_1171
Alternate gene names: 110633524
Gene position: 1280249-1282663 (Clockwise)
Preceding gene: 110633523
Following gene: 110633525
Centisome position: 29.01
GC content: 61.95
Gene sequence:
>2415_bases ATGACAGAAGCTCCGAAAACTCCGAGCGAGGCCGTGTTCCCGGTGTTGCCTTTGCGCGACATCGTCGTGTTCCCGCACAT GATCGTGCCGCTTTTTGTAGGGCGCGAGAAGTCGATCAAGGCTCTCGAAGAAGTAATGGGCGCCGAGAAGCAGGTTCTTC TGGCGACCCAGATGAACGCGGCCGACGACGATCCGGATCCGAGCAAGATCTACGACATCGGCACGCTCGCAAATGTGCTG CAGCTGCTAAAGCTTCCCGATGGCACTGTGAAAGTGCTGGTGGAGGGTGCTTCGCGCGCCCGCATTTCCGGCTTCACGGA TCGGCAGGATTTCCATGAGGCTCGTGCCGTGGCGCTGGCCGAGCCCGAGGAAGACGAGGTCGAGATCGAGGCGCTCGCGC GCTCTGTGGTTGCCGACTTCGAGAACTATGTGAAGCTCAACAAGAAGATCTCGCCCGAGGTCGTCGGCGCGACGAGCCAG ATTGAGGATTATTCCAAGCTGGCGGACACGGTTGCCTCGCACCTGGCGATCAAGATCCCCGAAAAGCAGGAGATGCTTGC GACGCTTTCCATCCGCGAGCGGCTTGAGAAGGCCATGGGCTTCATGGAAGCCGAGATCTCCGTGTTGCAGGTGGAAAAGC GCATCCGCTCGCGCGTCAAGCGCCAGATGGAGAAGACGCAGCGCGAATATTACCTCAACGAGCAGATGAAGGCGATCCAG AAGGAGCTCGGCGAGGGCGAGGACGGCCGCAACGAGGTGGCCGAGCTTGAGGAGCGCATCAAGAAGACCAAGCTCTCCAA GGAGGCGCGCGAGAAGGCGGAAGCCGAGCTCAAGAAGTTGCAGACCATGTCGCCCATGTCCGCAGAGGCGACGGTCGTGC GCAACTATCTCGATTGGCTGCTGTCGATCCCGTGGAAGAAGAGTTCCAAGGTCCGGCGCGACCTCGGTTTTGCCGAGGAG GTGCTCGACGCCGATCACTTCGGCCTGGAGAAGGTGAAGGAACGCATCATCGAGTATCTGGCCGTGCAAAGCCGGCAGGA TAAGATCAAGGGTCCGATCCTCTGCCTCGTCGGCCCTCCCGGCGTCGGTAAGACCTCGCTTGGCAAATCGATCGCCAAGG CGACCGGGCGCGAGTTCGTGCGCATGGCGCTGGGCGGCGTGCGTGACGAGGCCGAGATTCGCGGTCACCGGCGCACCTAT ATCGGCTCGATGCCCGGCAAGGTCATCCAGTCGATGAGGAAGGCCAAGAAGTCCAATCCGCTCTTCCTGCTCGACGAGAT CGACAAGATGGGCATGGATTTCCGCGGCGATCCTTCCTCGGCGCTGCTTGAGGTGCTCGATCCGGAGCAGAACGCGACCT TCATGGACCATTACCTCGAGGTCGAATACGACCTGTCGAGCGTGATGTTCGTGACGACGGCGAATACGCTCAACATCCCG CCGGCGCTTATGGACCGCATGGAGATCATCCGCATCGCCGGTTACACGGAAGATGAAAAGGTGGAGATCGCAAAGCGGCA CCTTCTGCCGAAGGCCGTTCGCGAGCATGCGCTGAAGCCCAGCGAGTTCTCCGTCACCGATGAGGCCCTGCAGACCGTCA TCCGCACCTACACGCGGGAAGCCGGTGTGCGTAACCTCGAGCGCGAGTTGATGAAGCTGGCGCGCAAGGCGGTCACCGAG ATCCTCAAGACCGGCAAAACTTCCGTCGAGGTGACCGAGGCCAATCTGGCCGATTATCTCGGTGTGCCGCGGTTCCGCTT CGGCCAGGTCGAAGGCGAGGATCAGGTCGGCGTGGTCACGGGCCTCGCCTGGACCGAGGTGGGTGGCGAGCTGCTTACGA TCGAAGGCGTCATGATGCCCGGCAAGGGCCGCATGACGGTTACCGGCAACTTGCGCGACGTGATGAAGGAATCGATTTCC GCAGCGGCCTCTTATGTTCGTTCAAGGGCTGTCGATTTCGGCATCGAGCCGCCCTTCTTCGACAAGAGGGACATCCACGT GCACGTGCCGGAAGGCGCGACACCCAAGGACGGTCCGTCGGCTGGTGTCGCGATGGCGACGGCGATCGTGTCGGTGCTCA CCGGGATTCCGGTCCGCAAGGATGTCGCGATGACGGGTGAGATCACGCTGCGCGGCCGGGTCCTGCCGATCGGCGGGCTC AAGGAGAAACTCCTCGCAGCCCTTCGCGGCGGCATCAAAAAGGTGCTGATCCCGGAAGAGAACGCCAAGGATTTGGTGGA TATCCCGGAGAACGTGAAGAGCGGCATGGAGATCGTTCCCGTCAGCCGCGTGGGCGAGGTTCTGGAGCATGCGCTGGTAC GCTTGCCCGAGCCGATCGAGTGGGTGGAGCCCGTCACCACACCCGCCACGGCGGACGTGTCTGAAGACGCAGGCCAGCCC GCGGTTGCCCACTAA
Upstream 100 bases:
>100_bases AGCGGTGTTGCGGTTGACAAGCCCATCCTTGCGGAAAGATGCCCCATAACAGTATGGTCCGGCCGGCTCCCAAGCGGTCG CGGCCAGAAAGGCTGAAAAA
Downstream 100 bases:
>100_bases GCTGCCATTTCCAGCAAAAAGATAAAAGCCGGCCCCGTCAGGGCCGGCTTTTTTCGCTGAAAACCGCAGAAATGCGGGGA TTTTTTGAGAATCCCCAGCA
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MTEAPKTPSEAVFPVLPLRDIVVFPHMIVPLFVGREKSIKALEEVMGAEKQVLLATQMNAADDDPDPSKIYDIGTLANVL QLLKLPDGTVKVLVEGASRARISGFTDRQDFHEARAVALAEPEEDEVEIEALARSVVADFENYVKLNKKISPEVVGATSQ IEDYSKLADTVASHLAIKIPEKQEMLATLSIRERLEKAMGFMEAEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQ KELGEGEDGRNEVAELEERIKKTKLSKEAREKAEAELKKLQTMSPMSAEATVVRNYLDWLLSIPWKKSSKVRRDLGFAEE VLDADHFGLEKVKERIIEYLAVQSRQDKIKGPILCLVGPPGVGKTSLGKSIAKATGREFVRMALGGVRDEAEIRGHRRTY IGSMPGKVIQSMRKAKKSNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNATFMDHYLEVEYDLSSVMFVTTANTLNIP PALMDRMEIIRIAGYTEDEKVEIAKRHLLPKAVREHALKPSEFSVTDEALQTVIRTYTREAGVRNLERELMKLARKAVTE ILKTGKTSVEVTEANLADYLGVPRFRFGQVEGEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESIS AAASYVRSRAVDFGIEPPFFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGL KEKLLAALRGGIKKVLIPEENAKDLVDIPENVKSGMEIVPVSRVGEVLEHALVRLPEPIEWVEPVTTPATADVSEDAGQP AVAH
Sequences:
>Translated_804_residues MTEAPKTPSEAVFPVLPLRDIVVFPHMIVPLFVGREKSIKALEEVMGAEKQVLLATQMNAADDDPDPSKIYDIGTLANVL QLLKLPDGTVKVLVEGASRARISGFTDRQDFHEARAVALAEPEEDEVEIEALARSVVADFENYVKLNKKISPEVVGATSQ IEDYSKLADTVASHLAIKIPEKQEMLATLSIRERLEKAMGFMEAEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQ KELGEGEDGRNEVAELEERIKKTKLSKEAREKAEAELKKLQTMSPMSAEATVVRNYLDWLLSIPWKKSSKVRRDLGFAEE VLDADHFGLEKVKERIIEYLAVQSRQDKIKGPILCLVGPPGVGKTSLGKSIAKATGREFVRMALGGVRDEAEIRGHRRTY IGSMPGKVIQSMRKAKKSNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNATFMDHYLEVEYDLSSVMFVTTANTLNIP PALMDRMEIIRIAGYTEDEKVEIAKRHLLPKAVREHALKPSEFSVTDEALQTVIRTYTREAGVRNLERELMKLARKAVTE ILKTGKTSVEVTEANLADYLGVPRFRFGQVEGEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESIS AAASYVRSRAVDFGIEPPFFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGL KEKLLAALRGGIKKVLIPEENAKDLVDIPENVKSGMEIVPVSRVGEVLEHALVRLPEPIEWVEPVTTPATADVSEDAGQP AVAH >Mature_803_residues TEAPKTPSEAVFPVLPLRDIVVFPHMIVPLFVGREKSIKALEEVMGAEKQVLLATQMNAADDDPDPSKIYDIGTLANVLQ LLKLPDGTVKVLVEGASRARISGFTDRQDFHEARAVALAEPEEDEVEIEALARSVVADFENYVKLNKKISPEVVGATSQI EDYSKLADTVASHLAIKIPEKQEMLATLSIRERLEKAMGFMEAEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQK ELGEGEDGRNEVAELEERIKKTKLSKEAREKAEAELKKLQTMSPMSAEATVVRNYLDWLLSIPWKKSSKVRRDLGFAEEV LDADHFGLEKVKERIIEYLAVQSRQDKIKGPILCLVGPPGVGKTSLGKSIAKATGREFVRMALGGVRDEAEIRGHRRTYI GSMPGKVIQSMRKAKKSNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNATFMDHYLEVEYDLSSVMFVTTANTLNIPP ALMDRMEIIRIAGYTEDEKVEIAKRHLLPKAVREHALKPSEFSVTDEALQTVIRTYTREAGVRNLERELMKLARKAVTEI LKTGKTSVEVTEANLADYLGVPRFRFGQVEGEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISA AASYVRSRAVDFGIEPPFFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGLK EKLLAALRGGIKKVLIPEENAKDLVDIPENVKSGMEIVPVSRVGEVLEHALVRLPEPIEWVEPVTTPATADVSEDAGQPA VAH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=829, Percent_Identity=38.2388419782871, Blast_Score=536, Evalue=1e-152, Organism=Homo sapiens, GI31377667, Length=566, Percent_Identity=46.643109540636, Blast_Score=513, Evalue=1e-145, Organism=Escherichia coli, GI1786643, Length=771, Percent_Identity=64.0726329442283, Blast_Score=997, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=702, Percent_Identity=41.1680911680912, Blast_Score=521, Evalue=1e-148, Organism=Caenorhabditis elegans, GI17556486, Length=780, Percent_Identity=33.0769230769231, Blast_Score=437, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319449, Length=714, Percent_Identity=40.7563025210084, Blast_Score=523, Evalue=1e-149, Organism=Drosophila melanogaster, GI221513036, Length=650, Percent_Identity=42.1538461538462, Blast_Score=523, Evalue=1e-148, Organism=Drosophila melanogaster, GI24666867, Length=650, Percent_Identity=42.1538461538462, Blast_Score=522, Evalue=1e-148,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 88900; Mature: 88769
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAPKTPSEAVFPVLPLRDIVVFPHMIVPLFVGREKSIKALEEVMGAEKQVLLATQMNA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCC ADDDPDPSKIYDIGTLANVLQLLKLPDGTVKVLVEGASRARISGFTDRQDFHEARAVALA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCCCHHHHHHHHHHHCC EPEEDEVEIEALARSVVADFENYVKLNKKISPEVVGATSQIEDYSKLADTVASHLAIKIP CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHEEECC EKQEMLATLSIRERLEKAMGFMEAEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KELGEGEDGRNEVAELEERIKKTKLSKEAREKAEAELKKLQTMSPMSAEATVVRNYLDWL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LSIPWKKSSKVRRDLGFAEEVLDADHFGLEKVKERIIEYLAVQSRQDKIKGPILCLVGPP HCCCCCCCHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC GVGKTSLGKSIAKATGREFVRMALGGVRDEAEIRGHRRTYIGSMPGKVIQSMRKAKKSNP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCC LFLLDEIDKMGMDFRGDPSSALLEVLDPEQNATFMDHYLEVEYDLSSVMFVTTANTLNIP EEEEECHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHEEEEECCCEEEEEEECCCCCCC PALMDRMEIIRIAGYTEDEKVEIAKRHLLPKAVREHALKPSEFSVTDEALQTVIRTYTRE HHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH AGVRNLERELMKLARKAVTEILKTGKTSVEVTEANLADYLGVPRFRFGQVEGEDQVGVVT HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCEECCCCCCCCCEEEE GLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVRSRAVDFGIEPPFF CCHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DKRDIHVHVPEGATPKDGPSAGVAMATAIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGL CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEEECCCH KEKLLAALRGGIKKVLIPEENAKDLVDIPENVKSGMEIVPVSRVGEVLEHALVRLPEPIE HHHHHHHHHCCCEEEECCCCCCCHHHCCCHHHHCCCEEEEHHHHHHHHHHHHHHCCCCHH WVEPVTTPATADVSEDAGQPAVAH HHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEAPKTPSEAVFPVLPLRDIVVFPHMIVPLFVGREKSIKALEEVMGAEKQVLLATQMNA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCC ADDDPDPSKIYDIGTLANVLQLLKLPDGTVKVLVEGASRARISGFTDRQDFHEARAVALA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCCCHHHHHHHHHHHCC EPEEDEVEIEALARSVVADFENYVKLNKKISPEVVGATSQIEDYSKLADTVASHLAIKIP CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHEEECC EKQEMLATLSIRERLEKAMGFMEAEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KELGEGEDGRNEVAELEERIKKTKLSKEAREKAEAELKKLQTMSPMSAEATVVRNYLDWL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LSIPWKKSSKVRRDLGFAEEVLDADHFGLEKVKERIIEYLAVQSRQDKIKGPILCLVGPP HCCCCCCCHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC GVGKTSLGKSIAKATGREFVRMALGGVRDEAEIRGHRRTYIGSMPGKVIQSMRKAKKSNP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCC LFLLDEIDKMGMDFRGDPSSALLEVLDPEQNATFMDHYLEVEYDLSSVMFVTTANTLNIP EEEEECHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHEEEEECCCEEEEEEECCCCCCC PALMDRMEIIRIAGYTEDEKVEIAKRHLLPKAVREHALKPSEFSVTDEALQTVIRTYTRE HHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH AGVRNLERELMKLARKAVTEILKTGKTSVEVTEANLADYLGVPRFRFGQVEGEDQVGVVT HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCEECCCCCCCCCEEEE GLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVRSRAVDFGIEPPFF CCHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DKRDIHVHVPEGATPKDGPSAGVAMATAIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGL CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEEECCCH KEKLLAALRGGIKKVLIPEENAKDLVDIPENVKSGMEIVPVSRVGEVLEHALVRLPEPIE HHHHHHHHHCCCEEEECCCCCCCHHHCCCHHHHCCCEEEEHHHHHHHHHHHHHHCCCCHH WVEPVTTPATADVSEDAGQPAVAH HHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA