| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633511
Identifier: 110633511
GI number: 110633511
Start: 1267791
End: 1268993
Strand: Reverse
Name: 110633511
Synonym: Meso_1158
Alternate gene names: NA
Gene position: 1268993-1267791 (Counterclockwise)
Preceding gene: 110633512
Following gene: 110633509
Centisome position: 28.76
GC content: 61.18
Gene sequence:
>1203_bases ATGGTTGAGGGCGAAAGCCAACCACGGAAAGATGCGCAGCCTGCCGCTCAGGAGAGATCCGCGGCCGGGTTGGGCGGCTA TTCGGCCCGGATTCTGGTTGCGGAAGAAGAGGCGCTGGAGGCCTATCGATCTGCCTGTCAGGGCGCCGTCTTTGCGCCTC CGCAAAGTCCTCTTTGGGCAAGAGCCTGGCTTCGGGGTCAGGGCCGTAACGGCTTGATTGCGCTCATCCAGCGCAGGGGC GCACCTGCGTTAGCGCTCGCATTGGAAGTGGTTGCCATAGGCCCTCTGCGCATCGCGCGTTTTGCCGGAGGGCGGCATGC CAACGGCAATTTTCCCGCCGTCAACCCAAATGCCTTTGCCGATGGCGCAGACCAGGCCGCGGCGGTGCGCGCCTTGATCG GCGCACTTCAATCAGGCCGCCCAGAAATAGACATGCTTGCCTTCGAGCGGCAGCGGGAGGCTTTTCAGCAATGCGCCAAC CCACTGCTGGCGTTTCCCCACAGCGCCAGCCCCAACCTGTCGCTGGCCGTCGACCTTTCCGAAGGGTTCGATAAGCTCCT CAGAGACAAGCGCCGGCGCAGAAGGCGCCAACTTCGGCAAATGGAAGCAGCAGGCGGTTACCGCCGCCTAACAGCCGCCT CCAAGGAGGAGGTGGAAGAAGTCCTCGAGCTCTTATTCGCCTGGAAAAGCGTCCGCCTCAACCGCATGGGAGTTCATGAT ATTTTCGGCTCGGACCAGGTCCGCGCGAGCTTCCGTCGGCTTTTCGTCTCCGCGCTTGAAGAGCCGCAGCCTTCATTCTT CCTCCATGCCCTTGAGGTGGGGGGGAAAATCCGCGCGATTACCTGCTCGAGCCGGACGGCCGAAAGCATCATCTGCGAAA TCAGCACCTTCTGCGAAGACGAGCTTGCCTATGCCAGCCCGGGCGACTTCCTGTTCTATGAGAACATCGCGGAAGCTGCC GCAGAAGGGCTTGCCTTCTACGATTTTGGCGTTGGAGACGAGCTTTACAAACGCCTTTGGTGTGACGTTGAAACCAGACA TGCGGATGTCTTCATCGGTTTGACGCCGCTCGGACGCGCCGCAGCACAAGCAAATTTTGCGGTGGCGGGGGTCAAGCGCG CGATCAAGCAAAACCCGACGCTAGCAAAGCTTGCGCGGCGCGCGCGGCAGATGTCGGCCAAATCCCAGGCTCAGGAAAAT TAG
Upstream 100 bases:
>100_bases GGGAACTAAGCGCCAACTGGAGCAATCCGCACGCCGCTGTTCACCATTTTCTGGTCATTTGCTGGCACGTTGGGGTGCAA CCGGATTGTCAGGATCGAGG
Downstream 100 bases:
>100_bases CGCCTAGGCAACATCCCGGTCCGGCGGGGCAGCGGGGGGTACATACCCGACAGGAGACACGAGAATGGGCTTTCCGAGCC CTTTCTCCCTGATCTGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MVEGESQPRKDAQPAAQERSAAGLGGYSARILVAEEEALEAYRSACQGAVFAPPQSPLWARAWLRGQGRNGLIALIQRRG APALALALEVVAIGPLRIARFAGGRHANGNFPAVNPNAFADGADQAAAVRALIGALQSGRPEIDMLAFERQREAFQQCAN PLLAFPHSASPNLSLAVDLSEGFDKLLRDKRRRRRRQLRQMEAAGGYRRLTAASKEEVEEVLELLFAWKSVRLNRMGVHD IFGSDQVRASFRRLFVSALEEPQPSFFLHALEVGGKIRAITCSSRTAESIICEISTFCEDELAYASPGDFLFYENIAEAA AEGLAFYDFGVGDELYKRLWCDVETRHADVFIGLTPLGRAAAQANFAVAGVKRAIKQNPTLAKLARRARQMSAKSQAQEN
Sequences:
>Translated_400_residues MVEGESQPRKDAQPAAQERSAAGLGGYSARILVAEEEALEAYRSACQGAVFAPPQSPLWARAWLRGQGRNGLIALIQRRG APALALALEVVAIGPLRIARFAGGRHANGNFPAVNPNAFADGADQAAAVRALIGALQSGRPEIDMLAFERQREAFQQCAN PLLAFPHSASPNLSLAVDLSEGFDKLLRDKRRRRRRQLRQMEAAGGYRRLTAASKEEVEEVLELLFAWKSVRLNRMGVHD IFGSDQVRASFRRLFVSALEEPQPSFFLHALEVGGKIRAITCSSRTAESIICEISTFCEDELAYASPGDFLFYENIAEAA AEGLAFYDFGVGDELYKRLWCDVETRHADVFIGLTPLGRAAAQANFAVAGVKRAIKQNPTLAKLARRARQMSAKSQAQEN >Mature_400_residues MVEGESQPRKDAQPAAQERSAAGLGGYSARILVAEEEALEAYRSACQGAVFAPPQSPLWARAWLRGQGRNGLIALIQRRG APALALALEVVAIGPLRIARFAGGRHANGNFPAVNPNAFADGADQAAAVRALIGALQSGRPEIDMLAFERQREAFQQCAN PLLAFPHSASPNLSLAVDLSEGFDKLLRDKRRRRRRQLRQMEAAGGYRRLTAASKEEVEEVLELLFAWKSVRLNRMGVHD IFGSDQVRASFRRLFVSALEEPQPSFFLHALEVGGKIRAITCSSRTAESIICEISTFCEDELAYASPGDFLFYENIAEAA AEGLAFYDFGVGDELYKRLWCDVETRHADVFIGLTPLGRAAAQANFAVAGVKRAIKQNPTLAKLARRARQMSAKSQAQEN
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43726; Mature: 43726
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEGESQPRKDAQPAAQERSAAGLGGYSARILVAEEEALEAYRSACQGAVFAPPQSPLWA CCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHCCCEECCCCCCHHH RAWLRGQGRNGLIALIQRRGAPALALALEVVAIGPLRIARFAGGRHANGNFPAVNPNAFA HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCC DGADQAAAVRALIGALQSGRPEIDMLAFERQREAFQQCANPLLAFPHSASPNLSLAVDLS CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCEEEEECH EGFDKLLRDKRRRRRRQLRQMEAAGGYRRLTAASKEEVEEVLELLFAWKSVRLNRMGVHD HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHH IFGSDQVRASFRRLFVSALEEPQPSFFLHALEVGGKIRAITCSSRTAESIICEISTFCED HCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH ELAYASPGDFLFYENIAEAAAEGLAFYDFGVGDELYKRLWCDVETRHADVFIGLTPLGRA HHCCCCCCCEEHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCCCHH AAQANFAVAGVKRAIKQNPTLAKLARRARQMSAKSQAQEN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVEGESQPRKDAQPAAQERSAAGLGGYSARILVAEEEALEAYRSACQGAVFAPPQSPLWA CCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHCCCEECCCCCCHHH RAWLRGQGRNGLIALIQRRGAPALALALEVVAIGPLRIARFAGGRHANGNFPAVNPNAFA HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCC DGADQAAAVRALIGALQSGRPEIDMLAFERQREAFQQCANPLLAFPHSASPNLSLAVDLS CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCEEEEECH EGFDKLLRDKRRRRRRQLRQMEAAGGYRRLTAASKEEVEEVLELLFAWKSVRLNRMGVHD HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHH IFGSDQVRASFRRLFVSALEEPQPSFFLHALEVGGKIRAITCSSRTAESIICEISTFCED HCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH ELAYASPGDFLFYENIAEAAAEGLAFYDFGVGDELYKRLWCDVETRHADVFIGLTPLGRA HHCCCCCCCEEHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCCCHH AAQANFAVAGVKRAIKQNPTLAKLARRARQMSAKSQAQEN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA