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The map label for this gene is exoF [H]

Identifier: 110633509

GI number: 110633509

Start: 1264892

End: 1265455

Strand: Reverse

Name: exoF [H]

Synonym: Meso_1156

Alternate gene names: 110633509

Gene position: 1265455-1264892 (Counterclockwise)

Preceding gene: 110633511

Following gene: 110633508

Centisome position: 28.68

GC content: 58.87

Gene sequence:

>564_bases
ATGAAGACTCAGTTCCCACTCCTGACGATGCTGATCGCCGCAGGCCTGTTGGCGGGATGTTCGGGCTATCGTCCAGCCCC
ACCAGCCTTCCACAAGGCGCTCTACCAACCCTATATTCTTGATGCGGGCGATCGCCTGCGCATCACCGTTTTCGATCAGG
AGAATCTTTCCAATACCTACGGCGTCGACCAGGCCGGCTATATCGCCTTTCCCCTTATCGGCTCGGTTCCAGCGCGCGGG
CGCACATTGAAACAGATTGAGCAGACGATCGCTGAAAAGCTGCGTGCCGGCTATCTCCGCGATCCGAATGTGACCGTAGA
GGTCGACCGCTATCGTCCGGTCTTCATCATGGGCGAGATCGGCGCGCCGGGCCAATATTCCTATGTGCCGGGCATGACGG
TTCAAAAGGCAATCGCAGCCGCGGGCGGCTTCACCCCACGCGCTTATCAAGGCACCGTCGATATCACACGCGAGATCAAC
GGACGCGTCATGACCGGCAGGGTGCTTATCTCCGACCCGTTGCTTCCGGGCGATACCATCTATATCAGAGAGCGGCTGTT
CTGA

Upstream 100 bases:

>100_bases
GTAGAATCCGCTTAACCGGCCATTAACCCTAATCATCGGATAAGGAGGAAGTATGGAGGCTTGCTAATAGGCGAGCATTG
TTGGATTTGGCCCGTTGCTT

Downstream 100 bases:

>100_bases
TGCATTTGGCCCCACGCTAAGCTCTTGCGCATCGTCCATTGCTTTCGTTCGCCGGTCGGCGGCATTTTCCGCCACGTGAG
AGATCTCAGCGAGGCTCAGG

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKTQFPLLTMLIAAGLLAGCSGYRPAPPAFHKALYQPYILDAGDRLRITVFDQENLSNTYGVDQAGYIAFPLIGSVPARG
RTLKQIEQTIAEKLRAGYLRDPNVTVEVDRYRPVFIMGEIGAPGQYSYVPGMTVQKAIAAAGGFTPRAYQGTVDITREIN
GRVMTGRVLISDPLLPGDTIYIRERLF

Sequences:

>Translated_187_residues
MKTQFPLLTMLIAAGLLAGCSGYRPAPPAFHKALYQPYILDAGDRLRITVFDQENLSNTYGVDQAGYIAFPLIGSVPARG
RTLKQIEQTIAEKLRAGYLRDPNVTVEVDRYRPVFIMGEIGAPGQYSYVPGMTVQKAIAAAGGFTPRAYQGTVDITREIN
GRVMTGRVLISDPLLPGDTIYIRERLF
>Mature_187_residues
MKTQFPLLTMLIAAGLLAGCSGYRPAPPAFHKALYQPYILDAGDRLRITVFDQENLSNTYGVDQAGYIAFPLIGSVPARG
RTLKQIEQTIAEKLRAGYLRDPNVTVEVDRYRPVFIMGEIGAPGQYSYVPGMTVQKAIAAAGGFTPRAYQGTVDITREIN
GRVMTGRVLISDPLLPGDTIYIRERLF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 20556; Mature: 20556

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQFPLLTMLIAAGLLAGCSGYRPAPPAFHKALYQPYILDAGDRLRITVFDQENLSNTY
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCCEEEEEEECCCCCCCCC
GVDQAGYIAFPLIGSVPARGRTLKQIEQTIAEKLRAGYLRDPNVTVEVDRYRPVFIMGEI
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECC
GAPGQYSYVPGMTVQKAIAAAGGFTPRAYQGTVDITREINGRVMTGRVLISDPLLPGDTI
CCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCEEEEEECCCEEEEEEEEEECCCCCCCEE
YIRERLF
EEEEECC
>Mature Secondary Structure
MKTQFPLLTMLIAAGLLAGCSGYRPAPPAFHKALYQPYILDAGDRLRITVFDQENLSNTY
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCCEEEEEEECCCCCCCCC
GVDQAGYIAFPLIGSVPARGRTLKQIEQTIAEKLRAGYLRDPNVTVEVDRYRPVFIMGEI
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECC
GAPGQYSYVPGMTVQKAIAAAGGFTPRAYQGTVDITREINGRVMTGRVLISDPLLPGDTI
CCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCEEEEEECCCEEEEEEEEEECCCCCCCEE
YIRERLF
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]