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The map label for this gene is wcaJ [H]

Identifier: 110633507

GI number: 110633507

Start: 1262120

End: 1263652

Strand: Reverse

Name: wcaJ [H]

Synonym: Meso_1154

Alternate gene names: 110633507

Gene position: 1263652-1262120 (Counterclockwise)

Preceding gene: 110633508

Following gene: 110633506

Centisome position: 28.64

GC content: 59.62

Gene sequence:

>1533_bases
ATGAACAACGCCGAACGAAAGCATCGTTTTACGCCCGAGGGCGGGCCGACCGAGGAGCCGCATCAGCGGCGCCCACGCCC
CGTGCTGAGCAAAATTGCACGGCAGGTGGCCCAGCAATATCGTCGCGACACCATGTCTCCCGTCATGGTGAGCGGTGTCA
TGCGCCTCATCGAATTTGGGGCACTGCTTGTTGCGGGGCTTCAAATCTATGCGGTGCATGTGGGGCTCGGCACTCACCTT
TCCTGGCATTATCCCATCGTCATCCTCGCCGTGTCGCTTCTGGCAGTCATCCTTATGGAGTTCTCCGACTGCTACCAGAT
GCCGGCGCTTCGCAACCCCGTCACACAGGCAGGACGCATCCTGCTCATCTGGTCGGCGACCTTCGCGCTGCTTACGCTCG
CGCTCTTCTTCCTGAAGATTTCCGAGGAATTTTCGCGGTTCTGGCTCGGCATCTGGTATCTCAGCGGGCTGGCACTTCTG
CTTGTCCTTCGCCTTATCGCGTCGCGGCTCATCCGAAGATGGGCGCGCAACGGGCGGATGGAACGGCGTGCTGTGCTTGT
GGGCGGCGGCAAGAATGCCGAACACCTTATCCGCTCCATCGAGCAACAGCCCTATAATGATATCCGCATCTGCGGCATCT
TCGACGACAGGGATGAAACCCGCTCCCCGCCGGTCGTTGCGGGCTATCCGAAACTCGGCAATATCGATGAGCTCATCGAA
TTTGCACGCATTGCACGCATCGACATGCTGATCGTCTCTCTGCCGATCACTGCCGAGGCACGCGTGCTAACGCTGTTACG
CAAGCTCTGGGTGCTGCCGATCGATATCCGGCTCTCGGCCCACTCGACCCATCTGCGGTTCCGGCCCCGCGCCTATTCCT
ATATCGGCGCGGTGCCGATGCTCGATATTTTCGACAGGCCGATCAACGACTGGGATTCGGTCGCCAAGCGCGCCTTCGAT
ATCGTTTTCAGCCTGATGGGCATCATCGTCTTTTCGCCGGTAATGCTTGCAACGGCGATCGCCATCAAGCTCGACAGCAA
GGGCCCAGTGATCTTCAAGCAGCGGCGGCATGGCTTCAACAACGAGGAGATCGAGGTCTACAAATTCCGCTCCATGTATG
TGGAAGCCAGCGATCCCACCGCGCGAAAGCCCGTCACCAGGGGCGACCCGCGCGTGACGCGCGTCGGCCGGTTCATTCGC
AAGACTTCGATCGATGAGCTGCCGCAATTCTTCAACGCGCTCTTCGGCAGCCTGTCCTTGGTAGGACCTCGGCCGCATGC
GGTGGCGGCGGAGGCGCATAACCGGTTGTTCGACGAGGTGGTGGACGGCTATTTCGCCCGGCACCGCGTGAAACCAGGCG
TGACCGGATGGGCGCAGATAAACGGCTGGCGCGGTGAGCTCGATACGGAGGAGAAAATCCGCAAGCGTATCGAATACGAC
CTTTACTACATCGAAAACTGGTCGCTCTGGTTCGATCTCAAGATCCTGCTCCTGACGCCGATTCGCCTTCTGGATACGAG
AAACGCCTATTGA

Upstream 100 bases:

>100_bases
CGAGAGCGTCTAATCTGCTAAGGAACTTAGACTGCCCGGCGAATTCTCAAGGTTTTCTTTAGCCTTGGATGTTAACGACA
GCTAAATTGGGCGTGGGGAA

Downstream 100 bases:

>100_bases
GCACGCCCGGCCAAGCAAGACCTGAGGGCATGTCTCTTTCCCGTGCTGCCATCGATGCGCGACTGAAAGAACTCATTCGT
GCGGGCGCGCTGGCGGTGGG

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MNNAERKHRFTPEGGPTEEPHQRRPRPVLSKIARQVAQQYRRDTMSPVMVSGVMRLIEFGALLVAGLQIYAVHVGLGTHL
SWHYPIVILAVSLLAVILMEFSDCYQMPALRNPVTQAGRILLIWSATFALLTLALFFLKISEEFSRFWLGIWYLSGLALL
LVLRLIASRLIRRWARNGRMERRAVLVGGGKNAEHLIRSIEQQPYNDIRICGIFDDRDETRSPPVVAGYPKLGNIDELIE
FARIARIDMLIVSLPITAEARVLTLLRKLWVLPIDIRLSAHSTHLRFRPRAYSYIGAVPMLDIFDRPINDWDSVAKRAFD
IVFSLMGIIVFSPVMLATAIAIKLDSKGPVIFKQRRHGFNNEEIEVYKFRSMYVEASDPTARKPVTRGDPRVTRVGRFIR
KTSIDELPQFFNALFGSLSLVGPRPHAVAAEAHNRLFDEVVDGYFARHRVKPGVTGWAQINGWRGELDTEEKIRKRIEYD
LYYIENWSLWFDLKILLLTPIRLLDTRNAY

Sequences:

>Translated_510_residues
MNNAERKHRFTPEGGPTEEPHQRRPRPVLSKIARQVAQQYRRDTMSPVMVSGVMRLIEFGALLVAGLQIYAVHVGLGTHL
SWHYPIVILAVSLLAVILMEFSDCYQMPALRNPVTQAGRILLIWSATFALLTLALFFLKISEEFSRFWLGIWYLSGLALL
LVLRLIASRLIRRWARNGRMERRAVLVGGGKNAEHLIRSIEQQPYNDIRICGIFDDRDETRSPPVVAGYPKLGNIDELIE
FARIARIDMLIVSLPITAEARVLTLLRKLWVLPIDIRLSAHSTHLRFRPRAYSYIGAVPMLDIFDRPINDWDSVAKRAFD
IVFSLMGIIVFSPVMLATAIAIKLDSKGPVIFKQRRHGFNNEEIEVYKFRSMYVEASDPTARKPVTRGDPRVTRVGRFIR
KTSIDELPQFFNALFGSLSLVGPRPHAVAAEAHNRLFDEVVDGYFARHRVKPGVTGWAQINGWRGELDTEEKIRKRIEYD
LYYIENWSLWFDLKILLLTPIRLLDTRNAY
>Mature_510_residues
MNNAERKHRFTPEGGPTEEPHQRRPRPVLSKIARQVAQQYRRDTMSPVMVSGVMRLIEFGALLVAGLQIYAVHVGLGTHL
SWHYPIVILAVSLLAVILMEFSDCYQMPALRNPVTQAGRILLIWSATFALLTLALFFLKISEEFSRFWLGIWYLSGLALL
LVLRLIASRLIRRWARNGRMERRAVLVGGGKNAEHLIRSIEQQPYNDIRICGIFDDRDETRSPPVVAGYPKLGNIDELIE
FARIARIDMLIVSLPITAEARVLTLLRKLWVLPIDIRLSAHSTHLRFRPRAYSYIGAVPMLDIFDRPINDWDSVAKRAFD
IVFSLMGIIVFSPVMLATAIAIKLDSKGPVIFKQRRHGFNNEEIEVYKFRSMYVEASDPTARKPVTRGDPRVTRVGRFIR
KTSIDELPQFFNALFGSLSLVGPRPHAVAAEAHNRLFDEVVDGYFARHRVKPGVTGWAQINGWRGELDTEEKIRKRIEYD
LYYIENWSLWFDLKILLLTPIRLLDTRNAY

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=476, Percent_Identity=34.453781512605, Blast_Score=272, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 58510; Mature: 58510

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNAERKHRFTPEGGPTEEPHQRRPRPVLSKIARQVAQQYRRDTMSPVMVSGVMRLIEFG
CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ALLVAGLQIYAVHVGLGTHLSWHYPIVILAVSLLAVILMEFSDCYQMPALRNPVTQAGRI
HHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCE
LLIWSATFALLTLALFFLKISEEFSRFWLGIWYLSGLALLLVLRLIASRLIRRWARNGRM
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ERRAVLVGGGKNAEHLIRSIEQQPYNDIRICGIFDDRDETRSPPVVAGYPKLGNIDELIE
EEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHH
FARIARIDMLIVSLPITAEARVLTLLRKLWVLPIDIRLSAHSTHLRFRPRAYSYIGAVPM
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHEEEEEEEECCCCEEEECCCHHHHHCCCHH
LDIFDRPINDWDSVAKRAFDIVFSLMGIIVFSPVMLATAIAIKLDSKGPVIFKQRRHGFN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHCCCC
NEEIEVYKFRSMYVEASDPTARKPVTRGDPRVTRVGRFIRKTSIDELPQFFNALFGSLSL
CCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
VGPRPHAVAAEAHNRLFDEVVDGYFARHRVKPGVTGWAQINGWRGELDTEEKIRKRIEYD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHE
LYYIENWSLWFDLKILLLTPIRLLDTRNAY
EEEEECCEEEEEHHHHHHCCHHHHCCCCCC
>Mature Secondary Structure
MNNAERKHRFTPEGGPTEEPHQRRPRPVLSKIARQVAQQYRRDTMSPVMVSGVMRLIEFG
CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ALLVAGLQIYAVHVGLGTHLSWHYPIVILAVSLLAVILMEFSDCYQMPALRNPVTQAGRI
HHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCE
LLIWSATFALLTLALFFLKISEEFSRFWLGIWYLSGLALLLVLRLIASRLIRRWARNGRM
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ERRAVLVGGGKNAEHLIRSIEQQPYNDIRICGIFDDRDETRSPPVVAGYPKLGNIDELIE
EEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHH
FARIARIDMLIVSLPITAEARVLTLLRKLWVLPIDIRLSAHSTHLRFRPRAYSYIGAVPM
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHEEEEEEEECCCCEEEECCCHHHHHCCCHH
LDIFDRPINDWDSVAKRAFDIVFSLMGIIVFSPVMLATAIAIKLDSKGPVIFKQRRHGFN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHCCCC
NEEIEVYKFRSMYVEASDPTARKPVTRGDPRVTRVGRFIRKTSIDELPQFFNALFGSLSL
CCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
VGPRPHAVAAEAHNRLFDEVVDGYFARHRVKPGVTGWAQINGWRGELDTEEKIRKRIEYD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHE
LYYIENWSLWFDLKILLLTPIRLLDTRNAY
EEEEECCEEEEEHHHHHHCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]