Click here to switch to the map view.

The map label for this gene is 110633506

Identifier: 110633506

GI number: 110633506

Start: 1260825

End: 1262090

Strand: Reverse

Name: 110633506

Synonym: Meso_1153

Alternate gene names: NA

Gene position: 1262090-1260825 (Counterclockwise)

Preceding gene: 110633507

Following gene: 110633504

Centisome position: 28.6

GC content: 60.66

Gene sequence:

>1266_bases
ATGTCTCTTTCCCGTGCTGCCATCGATGCGCGACTGAAAGAACTCATTCGTGCGGGCGCGCTGGCGGTGGGTGTCTTTCT
TGCCGGTTTTGTGGTTCGCGAGCCTGCGCCTTACGAGATTTATATGGTGGGCCTCATCGGGGTATGGGCGCTTTTCGGGC
TCAGGCTTTCCCGGCACGTGATGCCGCTTCTCGTGCTTCTGCTTCTCTTCAATCTCGGCGGGCTCGTGGCCGCCAGCCAG
GTTCCCGATCCGGGGCTACGCGATGTGCCGCTCTATCTGGCCGTCTCGCTGTTTCTCGCCCTCACCTCCGTCTTCTTCGC
GGCGGTGGTGGAGCAGCAGCCAAGCGTGCTGACCGTCATCTTCCGCTCGTGGTTTGCTGCGGCGGTGATTACCGCATTGG
TGGGCATTCTCGGTTATTTCCAAGCATTTCCCGGCTCCGAGATGTTCACGCGATATGGCCGCGCGGCGGGTGTATTCGAG
GACCCGAACGTATTCGGCCCGTTTCTCACACTGCCGGGCATCTATCTTCTTCAGCGCATCCTGACCGGCCGGCCGGCCAC
GGTCCTGCTTGCGATCCCTCCTTTCCTCATCATCACGCTGGGGATCTTTCTTTCCTTCTCGCGCGGGGCGTGGGGGCTTT
TTGTAATATCAGCCGTCATGCTTGCACTCGCGCTCTTCATCCATAACAGGCGCGGCGCTGTGCGGTTGCGAATCTTCGGC
ATGAGCATCGCCGCCTTTGCCATTGCGGCGGTCGCACTCATCATCATTGTCAATATTCCGACCGTGGCCGAGCTCTTTTC
CGAGCGCGCGCAGCTGGTGCAGGATTATGACGCCAACCGGGTTGGCCGCTTCGCGCGCCACGCGCTCGGCTTCATGCTGG
CGACCGAACACCCGCTCGGCATCGGCCCGCTACAGTTCGGCGTCCTTTACGGTGTCGATACGCACAATATCTGGCTGAAG
GCGTTGCTCGACTATTCGTGGTTGGGCTTTGCCGCGCTTCTTACGCTCGTTGCGTGGACAGTGGCCGGCGCATTCCGGAT
CCTTTTTCGCGCCCGCCCGTGGCAGCCCTACCTCCTCTGCGCATTCGTGGTCTTCCTCGGCCATATTCTGCTCGGATGGG
TGATCGACACCGATCACTGGCGGCACTTCTATATGCTGCTGGGCATTATCTGGGGGATGATGGCGCTGGAGCAAAGGCAC
CAGGCAGGAATACTGAGGGAAAGGAAAATGGTCGGAGCGGCGGGATTCGAACCCACGACCCCTTGA

Upstream 100 bases:

>100_bases
CGCTCTGGTTCGATCTCAAGATCCTGCTCCTGACGCCGATTCGCCTTCTGGATACGAGAAACGCCTATTGAGCACGCCCG
GCCAAGCAAGACCTGAGGGC

Downstream 100 bases:

>100_bases
CCCCCAGTCAAGTGCGCTACCGGGCTGCGCTACGCTCCGAACCGCGGAAAGCCCTATAAGCTCCAAGGTTCAGGTGCAAG
GGCAAAATCATCACCTCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MSLSRAAIDARLKELIRAGALAVGVFLAGFVVREPAPYEIYMVGLIGVWALFGLRLSRHVMPLLVLLLLFNLGGLVAASQ
VPDPGLRDVPLYLAVSLFLALTSVFFAAVVEQQPSVLTVIFRSWFAAAVITALVGILGYFQAFPGSEMFTRYGRAAGVFE
DPNVFGPFLTLPGIYLLQRILTGRPATVLLAIPPFLIITLGIFLSFSRGAWGLFVISAVMLALALFIHNRRGAVRLRIFG
MSIAAFAIAAVALIIIVNIPTVAELFSERAQLVQDYDANRVGRFARHALGFMLATEHPLGIGPLQFGVLYGVDTHNIWLK
ALLDYSWLGFAALLTLVAWTVAGAFRILFRARPWQPYLLCAFVVFLGHILLGWVIDTDHWRHFYMLLGIIWGMMALEQRH
QAGILRERKMVGAAGFEPTTP

Sequences:

>Translated_421_residues
MSLSRAAIDARLKELIRAGALAVGVFLAGFVVREPAPYEIYMVGLIGVWALFGLRLSRHVMPLLVLLLLFNLGGLVAASQ
VPDPGLRDVPLYLAVSLFLALTSVFFAAVVEQQPSVLTVIFRSWFAAAVITALVGILGYFQAFPGSEMFTRYGRAAGVFE
DPNVFGPFLTLPGIYLLQRILTGRPATVLLAIPPFLIITLGIFLSFSRGAWGLFVISAVMLALALFIHNRRGAVRLRIFG
MSIAAFAIAAVALIIIVNIPTVAELFSERAQLVQDYDANRVGRFARHALGFMLATEHPLGIGPLQFGVLYGVDTHNIWLK
ALLDYSWLGFAALLTLVAWTVAGAFRILFRARPWQPYLLCAFVVFLGHILLGWVIDTDHWRHFYMLLGIIWGMMALEQRH
QAGILRERKMVGAAGFEPTTP
>Mature_420_residues
SLSRAAIDARLKELIRAGALAVGVFLAGFVVREPAPYEIYMVGLIGVWALFGLRLSRHVMPLLVLLLLFNLGGLVAASQV
PDPGLRDVPLYLAVSLFLALTSVFFAAVVEQQPSVLTVIFRSWFAAAVITALVGILGYFQAFPGSEMFTRYGRAAGVFED
PNVFGPFLTLPGIYLLQRILTGRPATVLLAIPPFLIITLGIFLSFSRGAWGLFVISAVMLALALFIHNRRGAVRLRIFGM
SIAAFAIAAVALIIIVNIPTVAELFSERAQLVQDYDANRVGRFARHALGFMLATEHPLGIGPLQFGVLYGVDTHNIWLKA
LLDYSWLGFAALLTLVAWTVAGAFRILFRARPWQPYLLCAFVVFLGHILLGWVIDTDHWRHFYMLLGIIWGMMALEQRHQ
AGILRERKMVGAAGFEPTTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46337; Mature: 46206

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSRAAIDARLKELIRAGALAVGVFLAGFVVREPAPYEIYMVGLIGVWALFGLRLSRHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHH
MPLLVLLLLFNLGGLVAASQVPDPGLRDVPLYLAVSLFLALTSVFFAAVVEQQPSVLTVI
HHHHHHHHHHCCCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FRSWFAAAVITALVGILGYFQAFPGSEMFTRYGRAAGVFEDPNVFGPFLTLPGIYLLQRI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHH
LTGRPATVLLAIPPFLIITLGIFLSFSRGAWGLFVISAVMLALALFIHNRRGAVRLRIFG
HCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEH
MSIAAFAIAAVALIIIVNIPTVAELFSERAQLVQDYDANRVGRFARHALGFMLATEHPLG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
IGPLQFGVLYGVDTHNIWLKALLDYSWLGFAALLTLVAWTVAGAFRILFRARPWQPYLLC
CCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AFVVFLGHILLGWVIDTDHWRHFYMLLGIIWGMMALEQRHQAGILRERKMVGAAGFEPTT
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
P
C
>Mature Secondary Structure 
SLSRAAIDARLKELIRAGALAVGVFLAGFVVREPAPYEIYMVGLIGVWALFGLRLSRHV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHH
MPLLVLLLLFNLGGLVAASQVPDPGLRDVPLYLAVSLFLALTSVFFAAVVEQQPSVLTVI
HHHHHHHHHHCCCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FRSWFAAAVITALVGILGYFQAFPGSEMFTRYGRAAGVFEDPNVFGPFLTLPGIYLLQRI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHH
LTGRPATVLLAIPPFLIITLGIFLSFSRGAWGLFVISAVMLALALFIHNRRGAVRLRIFG
HCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEH
MSIAAFAIAAVALIIIVNIPTVAELFSERAQLVQDYDANRVGRFARHALGFMLATEHPLG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
IGPLQFGVLYGVDTHNIWLKALLDYSWLGFAALLTLVAWTVAGAFRILFRARPWQPYLLC
CCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AFVVFLGHILLGWVIDTDHWRHFYMLLGIIWGMMALEQRHQAGILRERKMVGAAGFEPTT
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA