| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633368
Identifier: 110633368
GI number: 110633368
Start: 1110949
End: 1112091
Strand: Direct
Name: 110633368
Synonym: Meso_1014
Alternate gene names: NA
Gene position: 1110949-1112091 (Clockwise)
Preceding gene: 110633365
Following gene: 110633374
Centisome position: 25.18
GC content: 66.05
Gene sequence:
>1143_bases GTGGCTGTCATCCAATACTTTCTCCGTTGGGTCGCAACGGCAAAGGTGTCACAGCGCGCGCAGGCCGCCGCTGCTTTGGC GCGAGCCTATCTTCATAGAAAGTTCCCCTTTGAGGAGCGGGTGGCCGCCGAGGCCGCGATGACCCTTCTGGCGGAAGATC CTTCGCCGCAGGTTCGTCTTGCGCTTGCCGAAGTGCTTTCACTCAGCCACACGGCGCCGCCGCAGGTCGTCGCGGCGCTG GCAACCGATCAGCCGGAAGTGGCAGCACCCGTGCTCGTTCGCTCGCCTCTCCTCACAGATATAGACCTCATCGATTGGGT GGCCACGGGCGAGGTGCGGATCCAGGTTCTGATCGCCTCACGCCCCTGGGTTTCCATGGCGCTTGCGGCTGCCATCGCCG AAGTGGGGGAAGCACCGGCCTGCCTGGCGCTTCTGCGCAATGGAGGCGCACAGATCGCGGCTTTGAGTTTCCGCCGAATG ATAGAGCGGCACGGCGCTCACTCCGGGGTTCGCGCCGCCCTTGCAGCTGACCGCCGCCTGCCATCCGACTGCCGTCACCT GTTGCTTGTCCATGTGGGGGAGGCGCTTTCCTCCGCCCGTTTCGTCCAGGCGCTCATGGGTTCCGAGCGCGCGGAAAAGC TGACACGGGAGGCCTGCGTGAAAGCCTCGCTCACGCTTATCGAAACGACGGAGCCTCGGGAGCACGCGGCGCTTGTGGAG CACTTGCGGCTTCGAGGGGATCTGACCTCCGCCTTCCTCGCCCGCTCCGTGGCTCACGGTAAAATCGACTTCTTCGGCGC GGTCCTCGTAGCCCTCACAGGGACAAGCGAAGCGCGTGTGCGCTCCACCCTTTCGCGCGGCAGGGATGGCGCGGTAACGG GCTTGCTCGCCAAGGCCGGCCTCAAGCAGATCACGCACGCGCCGATTCTCGCCGCGCTGAAGATTTGGCGTCAGGTCGCG AACGGAAAGCGCGCCGCGGGCCCGCAGGAGGCTTCCTGGCACATGCTGAAGGCCCTGGAGGGCAATCCGAGGGCCTTCGA AGACCCGGCAGGCACTGCGCTCGCCGGCTTGCTGCGGCGCATTCATCTTGAAGCGATGCGCCAGAACGCGCGCCAGCAGG CGCTGGCATTGGCGGCGGCGTGA
Upstream 100 bases:
>100_bases CCGCAAGTTGCGTCGGTACACGACTTTCGAACGGCAATTATGGTCAACGAATTCTAAACGAACAGCGCCTAACCTGAGGT TTATCAGGGGGAGAAAAATT
Downstream 100 bases:
>100_bases TGAGAGCGAATAGGGAATAGCGAGTAGCGAATAGAAGAGCAGGAGACAGGAAGTCGCCGCTGTCGCTGCCGCGACGCTAT TCACTAACTCCCCTATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MAVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRLALAEVLSLSHTAPPQVVAAL ATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIASRPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRM IERHGAHSGVRAALAADRRLPSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVE HLRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAGLKQITHAPILAALKIWRQVA NGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRRIHLEAMRQNARQQALALAAA
Sequences:
>Translated_380_residues MAVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRLALAEVLSLSHTAPPQVVAAL ATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIASRPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRM IERHGAHSGVRAALAADRRLPSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVE HLRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAGLKQITHAPILAALKIWRQVA NGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRRIHLEAMRQNARQQALALAAA >Mature_379_residues AVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRLALAEVLSLSHTAPPQVVAALA TDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIASRPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRMI ERHGAHSGVRAALAADRRLPSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVEH LRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAGLKQITHAPILAALKIWRQVAN GKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRRIHLEAMRQNARQQALALAAA
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40653; Mature: 40521
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH ALAEVLSLSHTAPPQVVAALATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIAS HHHHHHHHCCCCCHHHHHHHHCCCCCHHCHHHHHCCCCCCHHHHHHHCCCCEEEEEEEEC RPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRMIERHGAHSGVRAALAADRRL CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC PSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVE CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH HLRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAG HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH LKQITHAPILAALKIWRQVANGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IHLEAMRQNARQQALALAAA HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH ALAEVLSLSHTAPPQVVAALATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIAS HHHHHHHHCCCCCHHHHHHHHCCCCCHHCHHHHHCCCCCCHHHHHHHCCCCEEEEEEEEC RPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRMIERHGAHSGVRAALAADRRL CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC PSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVE CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH HLRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAG HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH LKQITHAPILAALKIWRQVANGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IHLEAMRQNARQQALALAAA HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA