Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110633368

Identifier: 110633368

GI number: 110633368

Start: 1110949

End: 1112091

Strand: Direct

Name: 110633368

Synonym: Meso_1014

Alternate gene names: NA

Gene position: 1110949-1112091 (Clockwise)

Preceding gene: 110633365

Following gene: 110633374

Centisome position: 25.18

GC content: 66.05

Gene sequence:

>1143_bases
GTGGCTGTCATCCAATACTTTCTCCGTTGGGTCGCAACGGCAAAGGTGTCACAGCGCGCGCAGGCCGCCGCTGCTTTGGC
GCGAGCCTATCTTCATAGAAAGTTCCCCTTTGAGGAGCGGGTGGCCGCCGAGGCCGCGATGACCCTTCTGGCGGAAGATC
CTTCGCCGCAGGTTCGTCTTGCGCTTGCCGAAGTGCTTTCACTCAGCCACACGGCGCCGCCGCAGGTCGTCGCGGCGCTG
GCAACCGATCAGCCGGAAGTGGCAGCACCCGTGCTCGTTCGCTCGCCTCTCCTCACAGATATAGACCTCATCGATTGGGT
GGCCACGGGCGAGGTGCGGATCCAGGTTCTGATCGCCTCACGCCCCTGGGTTTCCATGGCGCTTGCGGCTGCCATCGCCG
AAGTGGGGGAAGCACCGGCCTGCCTGGCGCTTCTGCGCAATGGAGGCGCACAGATCGCGGCTTTGAGTTTCCGCCGAATG
ATAGAGCGGCACGGCGCTCACTCCGGGGTTCGCGCCGCCCTTGCAGCTGACCGCCGCCTGCCATCCGACTGCCGTCACCT
GTTGCTTGTCCATGTGGGGGAGGCGCTTTCCTCCGCCCGTTTCGTCCAGGCGCTCATGGGTTCCGAGCGCGCGGAAAAGC
TGACACGGGAGGCCTGCGTGAAAGCCTCGCTCACGCTTATCGAAACGACGGAGCCTCGGGAGCACGCGGCGCTTGTGGAG
CACTTGCGGCTTCGAGGGGATCTGACCTCCGCCTTCCTCGCCCGCTCCGTGGCTCACGGTAAAATCGACTTCTTCGGCGC
GGTCCTCGTAGCCCTCACAGGGACAAGCGAAGCGCGTGTGCGCTCCACCCTTTCGCGCGGCAGGGATGGCGCGGTAACGG
GCTTGCTCGCCAAGGCCGGCCTCAAGCAGATCACGCACGCGCCGATTCTCGCCGCGCTGAAGATTTGGCGTCAGGTCGCG
AACGGAAAGCGCGCCGCGGGCCCGCAGGAGGCTTCCTGGCACATGCTGAAGGCCCTGGAGGGCAATCCGAGGGCCTTCGA
AGACCCGGCAGGCACTGCGCTCGCCGGCTTGCTGCGGCGCATTCATCTTGAAGCGATGCGCCAGAACGCGCGCCAGCAGG
CGCTGGCATTGGCGGCGGCGTGA

Upstream 100 bases:

>100_bases
CCGCAAGTTGCGTCGGTACACGACTTTCGAACGGCAATTATGGTCAACGAATTCTAAACGAACAGCGCCTAACCTGAGGT
TTATCAGGGGGAGAAAAATT

Downstream 100 bases:

>100_bases
TGAGAGCGAATAGGGAATAGCGAGTAGCGAATAGAAGAGCAGGAGACAGGAAGTCGCCGCTGTCGCTGCCGCGACGCTAT
TCACTAACTCCCCTATTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MAVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRLALAEVLSLSHTAPPQVVAAL
ATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIASRPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRM
IERHGAHSGVRAALAADRRLPSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVE
HLRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAGLKQITHAPILAALKIWRQVA
NGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRRIHLEAMRQNARQQALALAAA

Sequences:

>Translated_380_residues
MAVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRLALAEVLSLSHTAPPQVVAAL
ATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIASRPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRM
IERHGAHSGVRAALAADRRLPSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVE
HLRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAGLKQITHAPILAALKIWRQVA
NGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRRIHLEAMRQNARQQALALAAA
>Mature_379_residues
AVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRLALAEVLSLSHTAPPQVVAALA
TDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIASRPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRMI
ERHGAHSGVRAALAADRRLPSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVEH
LRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAGLKQITHAPILAALKIWRQVAN
GKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRRIHLEAMRQNARQQALALAAA

Specific function: Unknown

COG id: COG5330

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40653; Mature: 40521

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH
ALAEVLSLSHTAPPQVVAALATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIAS
HHHHHHHHCCCCCHHHHHHHHCCCCCHHCHHHHHCCCCCCHHHHHHHCCCCEEEEEEEEC
RPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRMIERHGAHSGVRAALAADRRL
CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
HLRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAG
HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
LKQITHAPILAALKIWRQVANGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
IHLEAMRQNARQQALALAAA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH
ALAEVLSLSHTAPPQVVAALATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIAS
HHHHHHHHCCCCCHHHHHHHHCCCCCHHCHHHHHCCCCCCHHHHHHHCCCCEEEEEEEEC
RPWVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRMIERHGAHSGVRAALAADRRL
CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PSDCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHAALVE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
HLRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAG
HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
LKQITHAPILAALKIWRQVANGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
IHLEAMRQNARQQALALAAA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA